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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8XGC | 38317 | 2024-03-18 | 2023-12-15 | 3.7 | 3.66 | — | 3.7 | 0.004 | 0.93 | 2.0 | 0.05 | 15.91 | 0.01 | 2.237 | 5.24 | 0.02 | 2.9 | 97.1 | 0.0 | -1.60 | 0.75 | 0.76 | 1.46 | 3.7 | 0.003 | 0.60 | 0.0 | 0.04 | 17.23 | 0.00 | 2.072 | 10.80 | 1.89 | 2.9 | 97.1 | 0.0 | 0.67 | 1.57 | 0.76 | 0.78 | 1.36 | 82765 | 10319 | 36 | 90 | 12 | 0 | 0 | logfile |
✔ | 8XD6 | 38267 | 2024-03-10 | 2023-12-10 | 2.79 | 2.93 | 1.04 | 2.9 | 0.009 | 1.12 | 0.0 | 0.06 | 16.23 | 0.01 | 2.369 | 7.03 | 3.51 | 3.4 | 96.6 | 0.0 | 0.89 | 0.48 | 0.90 | 4.52 | 2.9 | 0.015 | 1.12 | 1.0 | 0.04 | 16.59 | 0.01 | 0.945 | 8.37 | 1.46 | 1.7 | 98.3 | 0.0 | 1.45 | 0.41 | 0.48 | 0.93 | 4.61 | 3402 | 419 | 2 | 0 | 4 | 44 | 0 | logfile |
✔ | 8XD6 | 38267 | 2024-02-13 | 2023-12-10 | 2.79 | 2.93 | 1.04 | 2.9 | 0.009 | 1.12 | 0.0 | 0.06 | 16.23 | 0.01 | 2.369 | 7.03 | 3.51 | 3.4 | 96.6 | 0.0 | 0.89 | 0.48 | 0.90 | 4.52 | 2.9 | 0.015 | 1.12 | 1.0 | 0.04 | 16.59 | 0.01 | 0.945 | 8.37 | 1.46 | 1.7 | 98.3 | 0.0 | 1.45 | 0.41 | 0.48 | 0.93 | 4.61 | 3402 | 419 | 2 | 0 | 4 | 44 | 0 | logfile |
✔ | 8XD6 | 38267 | 2024-01-17 | 2023-12-10 | 2.79 | 2.93 | 1.04 | 2.9 | 0.009 | 1.12 | 0.0 | 0.06 | 16.23 | 0.01 | 2.369 | 7.03 | 3.51 | 3.4 | 96.6 | 0.0 | 0.89 | 0.48 | 0.90 | 4.52 | 2.9 | 0.015 | 1.12 | 1.0 | 0.04 | 16.59 | 0.01 | 0.945 | 8.37 | 1.46 | 1.7 | 98.3 | 0.0 | 1.45 | 0.41 | 0.48 | 0.93 | 4.61 | 3402 | 419 | 2 | 0 | 4 | 44 | 0 | logfile |
✔ | 8XD5 | 38266 | 2024-03-10 | 2023-12-10 | 2.75 | 2.93 | 1.08 | 2.9 | 0.005 | 0.73 | 0.0 | 0.05 | 16.88 | 0.00 | 2.447 | 6.29 | 3.80 | 3.4 | 96.6 | 0.0 | 0.89 | 0.49 | 0.90 | 5.03 | 2.8 | 0.003 | 0.50 | 0.0 | 0.04 | 16.49 | 0.00 | 2.242 | 5.09 | 0.88 | 1.7 | 98.3 | 0.0 | 1.68 | 1.00 | 0.48 | 0.93 | 4.85 | 3378 | 419 | 2 | 0 | 2 | 31 | 0 | logfile |
✔ | 8XD5 | 38266 | 2024-02-13 | 2023-12-10 | 2.75 | 2.93 | 1.08 | 2.9 | 0.005 | 0.73 | 0.0 | 0.05 | 16.88 | 0.00 | 2.447 | 6.29 | 3.80 | 3.4 | 96.6 | 0.0 | 0.89 | 0.49 | 0.90 | 5.03 | 2.8 | 0.003 | 0.50 | 0.0 | 0.04 | 16.49 | 0.00 | 2.242 | 5.09 | 0.88 | 1.7 | 98.3 | 0.0 | 1.68 | 1.00 | 0.48 | 0.93 | 4.85 | 3378 | 419 | 2 | 0 | 2 | 31 | 0 | logfile |
✔ | 8XD5 | 38266 | 2024-01-17 | 2023-12-10 | 2.75 | 2.93 | 1.08 | 2.9 | 0.005 | 0.73 | 0.0 | 0.05 | 16.88 | 0.00 | 2.447 | 6.29 | 3.80 | 3.4 | 96.6 | 0.0 | 0.89 | 0.49 | 0.90 | 5.03 | 2.8 | 0.003 | 0.50 | 0.0 | 0.04 | 16.49 | 0.00 | 2.242 | 5.09 | 0.88 | 1.7 | 98.3 | 0.0 | 1.68 | 1.00 | 0.48 | 0.93 | 4.85 | 3378 | 419 | 2 | 0 | 2 | 31 | 0 | logfile |
✔ | 8XD4 | 38265 | 2024-03-10 | 2023-12-10 | 2.87 | 3.04 | — | 3.0 | 0.007 | 0.82 | 0.0 | 0.05 | 17.18 | 0.00 | 2.325 | 5.57 | 3.81 | 3.4 | 96.6 | 0.0 | 1.29 | 0.44 | 0.86 | 4.02 | 3.0 | 0.002 | 0.50 | 0.0 | 0.04 | 17.47 | 0.00 | 2.319 | 6.33 | 0.59 | 2.6 | 97.1 | 0.2 | 2.03 | 1.63 | 0.43 | 0.89 | 3.89 | 3342 | 418 | 2 | 0 | 2 | 11 | 0 | logfile |
✔ | 8XD4 | 38265 | 2024-02-13 | 2023-12-10 | 2.87 | 3.04 | — | 3.0 | 0.007 | 0.82 | 0.0 | 0.05 | 17.18 | 0.00 | 2.325 | 5.57 | 3.81 | 3.4 | 96.6 | 0.0 | 1.29 | 0.44 | 0.86 | 4.02 | 3.0 | 0.002 | 0.50 | 0.0 | 0.04 | 17.47 | 0.00 | 2.319 | 6.33 | 0.59 | 2.6 | 97.1 | 0.2 | 2.03 | 1.63 | 0.43 | 0.89 | 3.89 | 3342 | 418 | 2 | 0 | 2 | 11 | 0 | logfile |
✔ | 8XD4 | 38265 | 2024-01-17 | 2023-12-10 | 2.87 | 3.04 | — | 3.0 | 0.007 | 0.82 | 0.0 | 0.05 | 17.18 | 0.00 | 2.325 | 5.57 | 3.81 | 3.4 | 96.6 | 0.0 | 1.29 | 0.44 | 0.86 | 4.02 | 3.0 | 0.002 | 0.50 | 0.0 | 0.04 | 17.47 | 0.00 | 2.319 | 6.33 | 0.59 | 2.6 | 97.1 | 0.2 | 2.03 | 1.63 | 0.43 | 0.89 | 3.89 | 3342 | 418 | 2 | 0 | 2 | 11 | 0 | logfile |
✔ | 8XD3 | 38264 | 2024-03-10 | 2023-12-10 | 2.87 | 3.06 | 1.34 | 3.0 | 0.007 | 0.82 | 0.0 | 0.05 | 17.44 | 0.00 | 2.325 | 5.57 | 3.81 | 3.4 | 96.6 | 0.0 | 1.29 | 0.48 | 0.88 | 3.57 | 3.0 | 0.004 | 0.55 | 0.0 | 0.04 | 17.41 | 0.00 | 2.185 | 6.48 | 2.05 | 2.9 | 96.9 | 0.2 | 1.48 | 0.44 | 0.46 | 0.90 | 3.34 | 3342 | 418 | 2 | 0 | 2 | 11 | 0 | logfile |
✔ | 8XD3 | 38264 | 2024-02-13 | 2023-12-10 | 2.87 | 3.06 | 1.34 | 3.0 | 0.007 | 0.82 | 0.0 | 0.05 | 17.44 | 0.00 | 2.325 | 5.57 | 3.81 | 3.4 | 96.6 | 0.0 | 1.29 | 0.48 | 0.88 | 3.57 | 3.0 | 0.004 | 0.55 | 0.0 | 0.04 | 17.41 | 0.00 | 2.185 | 6.48 | 2.05 | 2.9 | 96.9 | 0.2 | 1.48 | 0.44 | 0.46 | 0.90 | 3.34 | 3342 | 418 | 2 | 0 | 2 | 11 | 0 | logfile |
✔ | 8XD3 | 38264 | 2024-01-17 | 2023-12-10 | 2.87 | 3.06 | 1.34 | 3.0 | 0.007 | 0.82 | 0.0 | 0.05 | 17.44 | 0.00 | 2.325 | 5.57 | 3.81 | 3.4 | 96.6 | 0.0 | 1.29 | 0.48 | 0.88 | 3.57 | 3.0 | 0.004 | 0.55 | 0.0 | 0.04 | 17.41 | 0.00 | 2.185 | 6.48 | 2.05 | 2.9 | 96.9 | 0.2 | 1.48 | 0.44 | 0.46 | 0.90 | 3.34 | 3342 | 418 | 2 | 0 | 2 | 11 | 0 | logfile |
✔ | 8XD2 | 38263 | 2024-03-10 | 2023-12-10 | 2.64 | 3.04 | — | 3.0 | 0.009 | 0.88 | 0.0 | 0.05 | 17.62 | 0.00 | 2.449 | 4.72 | 3.56 | 3.9 | 96.1 | 0.0 | 0.83 | 0.45 | 0.88 | 4.08 | 3.0 | 0.004 | 0.57 | 0.0 | 0.04 | 17.04 | 0.00 | 2.273 | 5.33 | 0.89 | 2.7 | 97.3 | 0.0 | 1.85 | 0.55 | 0.43 | 0.89 | 3.77 | 3305 | 416 | 2 | 0 | 2 | 9 | 0 | logfile |
✔ | 8XD2 | 38263 | 2024-02-13 | 2023-12-10 | 2.64 | 3.04 | — | 3.0 | 0.009 | 0.88 | 0.0 | 0.05 | 17.62 | 0.00 | 2.449 | 4.72 | 3.56 | 3.9 | 96.1 | 0.0 | 0.83 | 0.45 | 0.88 | 4.08 | 3.0 | 0.004 | 0.57 | 0.0 | 0.04 | 17.04 | 0.00 | 2.273 | 5.33 | 0.89 | 2.7 | 97.3 | 0.0 | 1.85 | 0.55 | 0.43 | 0.89 | 3.77 | 3305 | 416 | 2 | 0 | 2 | 9 | 0 | logfile |
✔ | 8XD2 | 38263 | 2024-01-17 | 2023-12-10 | 2.64 | 3.04 | — | 3.0 | 0.009 | 0.88 | 0.0 | 0.05 | 17.62 | 0.00 | 2.449 | 4.72 | 3.56 | 3.9 | 96.1 | 0.0 | 0.83 | 0.45 | 0.88 | 4.08 | 3.0 | 0.004 | 0.57 | 0.0 | 0.04 | 17.04 | 0.00 | 2.273 | 5.33 | 0.89 | 2.7 | 97.3 | 0.0 | 1.85 | 0.55 | 0.43 | 0.89 | 3.77 | 3305 | 416 | 2 | 0 | 2 | 9 | 0 | logfile |
✔ | 8XD1 | 38262 | 2024-03-10 | 2023-12-10 | 2.96 | 3.13 | 1.04 | 3.1 | 0.007 | 0.83 | 0.0 | 0.05 | 18.20 | 0.01 | 2.373 | 6.23 | 6.49 | 3.6 | 96.4 | 0.0 | 0.90 | 0.42 | 0.85 | 3.48 | 3.1 | 0.002 | 0.52 | 0.0 | 0.04 | 17.14 | 0.00 | 2.145 | 6.23 | 0.88 | 2.9 | 97.1 | 0.0 | 1.45 | 0.47 | 0.42 | 0.88 | 3.19 | 3307 | 416 | 2 | 0 | 1 | 9 | 0 | logfile |
✔ | 8XD1 | 38262 | 2024-02-13 | 2023-12-10 | 2.96 | 3.13 | 1.04 | 3.1 | 0.007 | 0.83 | 0.0 | 0.05 | 18.20 | 0.01 | 2.373 | 6.23 | 6.49 | 3.6 | 96.4 | 0.0 | 0.90 | 0.42 | 0.85 | 3.48 | 3.1 | 0.002 | 0.52 | 0.0 | 0.04 | 17.14 | 0.00 | 2.145 | 6.23 | 0.88 | 2.9 | 97.1 | 0.0 | 1.45 | 0.47 | 0.42 | 0.88 | 3.19 | 3307 | 416 | 2 | 0 | 1 | 9 | 0 | logfile |
✔ | 8XD1 | 38262 | 2024-01-17 | 2023-12-10 | 2.96 | 3.13 | 1.04 | 3.1 | 0.007 | 0.83 | 0.0 | 0.05 | 18.20 | 0.01 | 2.373 | 6.23 | 6.49 | 3.6 | 96.4 | 0.0 | 0.90 | 0.42 | 0.85 | 3.48 | 3.1 | 0.002 | 0.52 | 0.0 | 0.04 | 17.14 | 0.00 | 2.145 | 6.23 | 0.88 | 2.9 | 97.1 | 0.0 | 1.45 | 0.47 | 0.42 | 0.88 | 3.19 | 3307 | 416 | 2 | 0 | 1 | 9 | 0 | logfile |
✔ | 8XD0 | 38261 | 2024-03-10 | 2023-12-10 | 2.83 | 3.06 | 1.35 | 3.0 | 0.009 | 1.13 | 0.0 | 0.07 | 16.46 | 0.01 | 2.449 | 4.66 | 2.35 | 3.1 | 96.9 | 0.0 | 1.32 | 0.46 | 0.88 | 3.52 | 3.0 | 0.004 | 0.54 | 0.0 | 0.04 | 17.71 | 0.00 | 2.198 | 5.71 | 2.35 | 2.9 | 96.9 | 0.2 | 1.84 | 0.36 | 0.46 | 0.91 | 3.35 | 3357 | 417 | 2 | 0 | 2 | 14 | 0 | logfile |