The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7ND4 | 12275 | 2023-06-24 | 2021-01-30 | 3.6 | 3.31 | — | 3.2 | 0.004 | 0.62 | 3.0 | 0.05 | 11.02 | 0.00 | 2.233 | 3.79 | 0.28 | 4.1 | 95.6 | 0.2 | -0.12 | 0.74 | 0.79 | 2.91 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29848 | 3729 | 30 | 0 | 71 | 0 | 0 | logfile |
✘ | 7V2E | 31643 | 2024-02-17 | 2021-08-08 | 2.8 | 2.87 | — | 2.8 | 0.008 | 0.90 | 8.0 | 0.05 | 16.49 | 0.01 | 1.695 | 9.97 | 0.40 | 3.6 | 96.1 | 0.2 | 0.73 | 0.80 | 0.87 | 3.71 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 68244 | 8269 | 68 | 0 | 45 | 0 | 0 | logfile |
✘ | 7ND4 | 12275 | 2023-08-20 | 2021-01-30 | 3.6 | 3.31 | — | 3.2 | 0.004 | 0.62 | 3.0 | 0.05 | 11.02 | 0.00 | 2.233 | 3.79 | 0.28 | 4.1 | 95.6 | 0.2 | -0.12 | 0.74 | 0.79 | 2.91 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29848 | 3729 | 30 | 0 | 71 | 0 | 0 | logfile |
✘ | 5V93 | 8645 | 2023-12-16 | 2017-03-22 | 4.0 | 4.15 | — | 4.0 | 0.010 | 1.09 | 3.0 | 0.05 | 21.10 | 0.01 | 1.951 | 4.66 | 0.00 | 10.1 | 89.2 | 0.7 | -2.37 | 0.83 | 0.74 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 143580 | 5328 | 52 | 4752 | 0 | 0 | 0 | logfile |
✘ | 7ND4 | 12275 | 2023-07-14 | 2021-01-30 | 3.6 | 3.31 | — | 3.2 | 0.004 | 0.62 | 3.0 | 0.05 | 11.02 | 0.00 | 2.233 | 3.79 | 0.28 | 4.1 | 95.6 | 0.2 | -0.12 | 0.74 | 0.79 | 2.91 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29848 | 3729 | 30 | 0 | 71 | 0 | 0 | logfile |
✘ | 6ND1 | 0440 | 2023-08-11 | 2018-12-13 | 4.1 | 4.15 | — | 4.1 | 0.009 | 1.23 | 14.0 | 0.08 | 16.24 | 0.01 | 2.249 | 7.63 | 0.10 | 3.7 | 96.2 | 0.2 | -3.89 | 0.60 | 0.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9186 | 1179 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 7RYG | 24739 | 2023-06-24 | 2021-08-25 | 2.38 | 1.92 | — | 2.2 | 0.006 | 0.61 | 0.0 | 0.07 | 15.91 | 0.02 | 1.799 | 3.76 | 2.32 | 2.6 | 97.2 | 0.1 | 1.15 | 0.77 | 0.74 | 3.06 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 137579 | 5505 | 55 | 4408 | 8 | 0 | 0 | logfile |
✘ | 7oCA | 12802 | 2024-03-21 | 2021-04-26 | 3.4 | 3.03 | — | 3.2 | 0.009 | 0.96 | 0.0 | 0.04 | 16.90 | 0.00 | 2.080 | 4.67 | 0.15 | 3.5 | 96.5 | 0.0 | 0.20 | 0.72 | 0.80 | 3.80 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29294 | 3802 | 22 | 0 | 72 | 0 | 0 | logfile |
✘ | 7ND4 | 12275 | 2023-10-14 | 2021-01-30 | 3.6 | 3.31 | — | 3.2 | 0.004 | 0.62 | 3.0 | 0.05 | 11.02 | 0.00 | 2.233 | 3.79 | 0.28 | 4.1 | 95.6 | 0.2 | -0.12 | 0.74 | 0.79 | 2.91 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29848 | 3729 | 30 | 0 | 71 | 0 | 0 | logfile |
✘ | 7ND4 | 12275 | 2023-11-20 | 2021-01-30 | 3.6 | 3.31 | — | 3.2 | 0.004 | 0.62 | 3.0 | 0.05 | 11.02 | 0.00 | 2.233 | 3.79 | 0.28 | 4.1 | 95.6 | 0.2 | -0.12 | 0.74 | 0.79 | 2.91 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29848 | 3729 | 30 | 0 | 71 | 0 | 0 | logfile |
✘ | 6ND1 | 0440 | 2023-09-29 | 2018-12-13 | 4.1 | 4.15 | — | 4.1 | 0.009 | 1.23 | 14.0 | 0.08 | 16.24 | 0.01 | 2.249 | 7.63 | 0.10 | 3.7 | 96.2 | 0.2 | -3.89 | 0.60 | 0.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9186 | 1179 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 6ND1 | 0440 | 2023-12-08 | 2018-12-13 | 4.1 | 4.15 | — | 4.1 | 0.009 | 1.23 | 14.0 | 0.08 | 16.24 | 0.01 | 2.249 | 7.63 | 0.10 | 3.7 | 96.2 | 0.2 | -3.89 | 0.60 | 0.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9186 | 1179 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 6ND1 | 0440 | 2023-06-16 | 2018-12-13 | 4.1 | 4.15 | — | 4.1 | 0.009 | 1.23 | 14.0 | 0.08 | 16.24 | 0.01 | 2.249 | 7.63 | 0.10 | 3.7 | 96.2 | 0.2 | -3.89 | 0.60 | 0.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9186 | 1179 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 6ND1 | 0440 | 2023-07-05 | 2018-12-13 | 4.1 | 4.15 | — | 4.1 | 0.009 | 1.23 | 14.0 | 0.08 | 16.24 | 0.01 | 2.249 | 7.63 | 0.10 | 3.7 | 96.2 | 0.2 | -3.89 | 0.60 | 0.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9186 | 1179 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 6ND1 | 0440 | 2023-11-14 | 2018-12-13 | 4.1 | 4.15 | — | 4.1 | 0.009 | 1.23 | 14.0 | 0.08 | 16.24 | 0.01 | 2.249 | 7.63 | 0.10 | 3.7 | 96.2 | 0.2 | -3.89 | 0.60 | 0.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9186 | 1179 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 6ND1 | 0440 | 2023-10-04 | 2018-12-13 | 4.1 | 4.15 | — | 4.1 | 0.009 | 1.23 | 14.0 | 0.08 | 16.24 | 0.01 | 2.249 | 7.63 | 0.10 | 3.7 | 96.2 | 0.2 | -3.89 | 0.60 | 0.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9186 | 1179 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 7RYG | 24739 | 2023-11-20 | 2021-08-25 | 2.38 | 1.92 | — | 2.2 | 0.006 | 0.61 | 0.0 | 0.07 | 15.96 | 0.02 | 1.799 | 3.76 | 2.32 | 2.6 | 97.2 | 0.1 | 1.15 | 0.77 | 0.74 | 3.06 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 137579 | 5505 | 55 | 4408 | 8 | 0 | 0 | logfile |
✘ | 7oCA | 12802 | 2024-02-21 | 2021-04-26 | 3.4 | 3.03 | — | 3.2 | 0.009 | 0.96 | 0.0 | 0.04 | 16.90 | 0.00 | 2.080 | 4.67 | 0.15 | 3.5 | 96.5 | 0.0 | 0.20 | 0.72 | 0.80 | 3.80 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29294 | 3802 | 22 | 0 | 72 | 0 | 0 | logfile |
✘ | 6SG9 | 10175 | 2024-02-13 | 2019-08-03 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 104694 | 11989 | 60 | 146 | 837 | 3 | 0 | logfile |
✘ | 6SG9 | 10175 | 2024-01-17 | 2019-08-03 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 104694 | 11989 | 60 | 146 | 837 | 3 | 0 | logfile |