The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8FTK | 29439 | 2024-02-13 | 2023-01-12 | 4.56 | 5.56 | 4.86 | 4.4 | 0.002 | 0.58 | 0.0 | 0.04 | 4.66 | 0.00 | 2.125 | 4.21 | 0.00 | 5.9 | 94.1 | 0.0 | 0.74 | 0.85 | 0.81 | — | 4.4 | 0.003 | 0.55 | 0.0 | 0.04 | 4.49 | 0.00 | 2.164 | 4.30 | 0.00 | 8.2 | 91.8 | 0.0 | 0.75 | 1.24 | 0.86 | 0.82 | — | 7840 | 1584 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 5LiJ | 4054 | 2024-02-13 | 2016-07-14 | 4.2 | 3.63 | — | 4.2 | 0.009 | 2.92 | 4.0 | 0.17 | 15.82 | 0.01 | 2.249 | 25.64 | 0.00 | 10.7 | 89.3 | 0.0 | -6.36 | 0.85 | 0.76 | — | 3.8 | 0.005 | 1.17 | 0.0 | 0.04 | 10.44 | 0.00 | 2.149 | 15.78 | 0.00 | 35.3 | 64.7 | 0.0 | -5.53 | 1.48 | 0.86 | 0.78 | — | 761 | 152 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EDL | 28035 | 2024-02-13 | 2022-09-05 | 3.7 | 3.30 | 3.60 | 3.1 | 0.002 | 0.52 | 0.0 | 0.03 | 11.07 | 0.00 | 2.307 | 6.09 | 0.00 | 2.1 | 97.7 | 0.3 | 2.83 | 0.62 | 0.61 | -0.09 | 3.1 | 0.002 | 0.56 | 0.0 | 0.03 | 13.85 | 0.00 | 2.336 | 7.26 | 3.08 | 2.1 | 97.9 | 0.0 | 3.82 | 1.11 | 0.68 | 0.73 | 2.47 | 2470 | 395 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8TZS | 41768 | 2024-02-13 | 2023-08-27 | 3.84 | 4.01 | 3.90 | 4.0 | 0.005 | 0.87 | 0.0 | 0.05 | 15.83 | 0.01 | 2.170 | 9.05 | 0.24 | 3.6 | 96.4 | 0.0 | 0.65 | 0.65 | 0.77 | 1.99 | 4.0 | 0.003 | 0.71 | 0.0 | 0.04 | 16.71 | 0.00 | 2.218 | 11.21 | 4.96 | 4.2 | 95.8 | 0.0 | 1.58 | 0.94 | 0.66 | 0.77 | 1.31 | 3914 | 480 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FEH | 29027 | 2024-02-13 | 2022-12-06 | 3.28 | 4.31 | 3.36 | 3.4 | 0.008 | 1.02 | 0.0 | 0.07 | 14.17 | 0.01 | 2.317 | 7.23 | 1.83 | 7.1 | 92.9 | 0.0 | -3.45 | 0.45 | 0.76 | 1.53 | 3.5 | 0.003 | 0.62 | 0.0 | 0.04 | 15.12 | 0.00 | 2.251 | 10.73 | 0.46 | 4.9 | 95.1 | 0.0 | -1.23 | 2.58 | 0.47 | 0.88 | 2.23 | 1993 | 268 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UPT | 42455 | 2024-02-13 | 2023-10-23 | 2.8 | 3.38 | 2.84 | 2.9 | 0.016 | 2.20 | 0.0 | 0.16 | 30.45 | 0.01 | 1.072 | 99.56 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.23 | 0.59 | — | 2.9 | 0.005 | 0.73 | 0.0 | 0.04 | 27.91 | 0.01 | 2.113 | 22.27 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.95 | 0.28 | 0.87 | — | 1518 | 0 | 1 | 71 | 0 | 0 | 0 | logfile |
✔ | 8W77 | 37336 | 2024-02-13 | 2023-08-30 | 3.61 | 4.00 | 3.49 | 3.9 | 0.004 | 0.71 | 0.0 | 0.05 | 10.06 | 0.01 | 2.463 | 0.72 | 0.00 | 0.8 | 99.2 | 0.0 | 2.45 | 0.51 | 0.74 | 3.54 | 3.9 | 0.003 | 0.55 | 0.0 | 0.04 | 11.02 | 0.01 | 2.401 | 2.51 | 2.22 | 1.6 | 98.4 | 0.0 | 3.79 | 0.88 | 0.58 | 0.78 | 2.79 | 1601 | 260 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8SC1 | 40334 | 2024-02-13 | 2023-04-04 | 2.92 | 3.14 | 2.89 | 3.2 | 0.003 | 0.68 | 0.0 | 0.04 | 10.47 | 0.01 | 2.266 | 1.15 | 0.00 | 2.5 | 97.5 | 0.0 | -0.78 | 0.58 | 0.81 | 2.42 | 3.2 | 0.003 | 0.61 | 0.0 | 0.04 | 13.73 | 0.00 | 2.195 | 2.73 | 1.89 | 1.4 | 98.6 | 0.0 | 1.94 | 1.99 | 0.61 | 0.83 | 1.25 | 3447 | 446 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8PD5 | 17601 | 2024-02-13 | 2023-06-11 | 3.4 | 2.30 | 3.32 | 2.1 | 0.003 | 0.53 | 0.0 | 0.04 | 13.12 | 0.00 | 2.148 | 2.18 | 0.00 | 2.2 | 97.8 | 0.0 | 1.83 | 0.61 | 0.77 | 2.43 | 2.1 | 0.002 | 0.48 | 0.0 | 0.04 | 15.95 | 0.00 | 2.268 | 4.48 | 2.28 | 1.7 | 98.3 | 0.0 | 2.65 | 0.49 | 0.68 | 0.81 | 2.00 | 8093 | 1024 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8JHU | 36294 | 2024-02-13 | 2023-05-25 | 3.1 | 3.30 | 3.08 | 3.3 | 0.003 | 0.59 | 0.0 | 0.04 | 15.64 | 0.01 | 2.200 | 10.88 | 0.82 | 5.4 | 94.1 | 0.5 | -0.27 | 0.69 | 0.84 | 2.83 | 3.3 | 0.006 | 0.63 | 0.0 | 0.04 | 16.05 | 0.00 | 2.116 | 11.64 | 2.33 | 7.0 | 93.0 | 0.0 | -0.13 | 0.38 | 0.71 | 0.87 | 3.43 | 6554 | 811 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8TX1 | 41674 | 2024-02-15 | 2023-08-22 | 3.62 | 4.05 | 3.79 | 3.4 | 0.006 | 0.92 | 0.0 | 0.04 | 15.94 | 0.01 | 2.136 | 12.74 | 0.20 | 6.6 | 93.2 | 0.2 | 0.18 | 0.34 | 0.51 | 0.26 | 3.3 | 0.003 | 0.73 | 0.0 | 0.04 | 16.28 | 0.01 | 2.132 | 14.89 | 3.23 | 8.7 | 91.0 | 0.3 | -1.13 | 1.49 | 0.35 | 0.54 | 0.65 | 13687 | 1894 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8X5X | 38074 | 2024-02-13 | 2023-11-20 | 3.5 | 3.67 | 4.06 | 3.8 | 0.004 | 0.77 | 0.0 | 0.04 | 14.15 | 0.00 | 2.094 | 14.97 | 0.43 | 5.3 | 94.7 | 0.0 | 1.03 | 0.42 | 0.53 | 1.42 | 3.8 | 0.003 | 0.76 | 0.0 | 0.04 | 17.57 | 0.00 | 2.257 | 12.40 | 4.31 | 4.9 | 95.1 | 0.0 | 1.16 | 0.80 | 0.44 | 0.57 | 0.33 | 2105 | 256 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8B9L | 15935 | 2024-02-15 | 2022-10-06 | 3.45 | 4.42 | 3.50 | 3.9 | 0.004 | 0.78 | 1.0 | 0.05 | 17.52 | 0.02 | 2.155 | 14.92 | 1.18 | 8.4 | 90.8 | 0.8 | -0.21 | 0.77 | 0.59 | 0.69 | 3.9 | 0.003 | 0.89 | 0.0 | 0.05 | 17.27 | 0.01 | 2.130 | 18.43 | 4.33 | 8.5 | 90.7 | 0.8 | -0.38 | 1.82 | 0.85 | 0.78 | 0.55 | 6826 | 862 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8JY4 | 36719 | 2024-02-18 | 2023-07-02 | 3.58 | 4.95 | 3.68 | 4.2 | 0.003 | 0.55 | 0.0 | 0.04 | 15.96 | 0.00 | 1.980 | 6.92 | 0.00 | 3.0 | 96.9 | 0.1 | -0.52 | 0.62 | 0.78 | 0.68 | 4.2 | 0.003 | 0.64 | 0.0 | 0.04 | 16.09 | 0.00 | 2.086 | 13.89 | 2.28 | 3.6 | 96.3 | 0.1 | 1.01 | 1.35 | 0.62 | 0.80 | 0.40 | 22246 | 1383 | 1 | 0 | 0 | 0 | 11252 | logfile |
✔ | 8P51 | 17436 | 2024-02-15 | 2023-05-23 | 3.55 | 4.39 | 3.63 | 4.0 | 0.006 | 0.83 | 0.0 | 0.05 | 13.50 | 0.01 | 2.113 | 4.21 | 0.00 | 4.4 | 95.6 | 0.0 | -1.93 | 0.82 | 0.71 | 2.07 | 4.0 | 0.006 | 0.80 | 0.0 | 0.04 | 15.01 | 0.00 | 2.120 | 10.75 | 1.05 | 4.0 | 95.9 | 0.1 | 0.81 | 1.70 | 0.89 | 0.85 | 1.75 | 12389 | 1574 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 8ERC | 28552 | 2024-02-13 | 2022-10-11 | 3.7 | 3.47 | 3.08 | 3.7 | 0.003 | 0.67 | 0.0 | 0.04 | 12.91 | 0.00 | 2.115 | 8.25 | 0.00 | 2.3 | 97.7 | 0.0 | 1.99 | 0.51 | 0.65 | 1.22 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3510 | 441 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EDN | 28037 | 2024-02-13 | 2022-09-05 | 3.8 | 3.47 | 3.75 | 3.3 | 0.002 | 0.58 | 0.0 | 0.04 | 11.31 | 0.00 | 2.205 | 6.81 | 0.46 | 5.7 | 94.1 | 0.2 | 2.77 | 0.65 | 0.60 | 0.13 | 3.3 | 0.002 | 0.58 | 0.0 | 0.03 | 13.70 | 0.00 | 2.177 | 7.12 | 3.23 | 3.7 | 96.1 | 0.2 | 2.99 | 1.03 | 0.70 | 0.71 | 2.12 | 3683 | 579 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8TiF | 41286 | 2024-02-13 | 2023-07-19 | 3.89 | 3.95 | 3.71 | 4.1 | 0.005 | 0.55 | 0.0 | 0.04 | 17.04 | 0.00 | 2.317 | 8.78 | 1.02 | 1.6 | 98.4 | 0.0 | 0.15 | 0.23 | 0.85 | 1.30 | 4.1 | 0.002 | 0.42 | 0.0 | 0.04 | 16.97 | 0.00 | 2.337 | 4.94 | 2.04 | 1.6 | 98.4 | 0.0 | 0.98 | 0.36 | 0.22 | 0.85 | 3.19 | 889 | 131 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VV6 | 32139 | 2024-02-13 | 2021-11-04 | 3.3 | 3.47 | — | 3.5 | 0.010 | 1.38 | 0.0 | 0.07 | 19.05 | 0.01 | 2.291 | 4.89 | 10.37 | 5.2 | 94.8 | 0.0 | -4.22 | 0.62 | 0.83 | 1.64 | 3.4 | 0.003 | 0.58 | 0.0 | 0.04 | 16.46 | 0.00 | 2.189 | 6.66 | 3.73 | 2.2 | 97.8 | 0.0 | 3.08 | 0.66 | 0.65 | 0.86 | 1.99 | 2227 | 271 | 1 | 0 | 2 | 0 | 0 | logfile |
✘ | 5Lii | 4053 | 2024-02-13 | 2016-07-14 | 3.8 | 2.99 | — | 3.9 | 0.015 | 2.41 | 6.0 | 0.14 | 12.69 | 0.01 | 1.855 | 42.83 | 1.41 | 16.9 | 81.9 | 1.2 | -6.10 | 0.55 | 0.70 | 3.46 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3098 | 433 | 1 | 0 | 0 | 0 | 0 | logfile |