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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 3JAD | 6344 | 2024-02-15 | 2015-06-08 | 3.9 | 2.16 | — | 3.8 | 0.008 | 1.33 | 0.0 | 0.06 | 10.08 | 0.00 | 2.250 | 16.87 | 0.43 | 2.7 | 97.3 | 0.0 | -2.13 | 0.68 | 0.72 | 0.33 | 2.6 | 0.004 | 0.78 | 0.0 | 0.04 | 12.70 | 0.00 | 2.181 | 18.39 | 3.28 | 4.5 | 95.5 | 0.0 | 0.03 | 1.24 | 0.70 | 0.78 | 0.54 | 12705 | 1685 | 15 | 0 | 15 | 0 | 0 | logfile |
✔ | 7PQX | 13606 | 2024-02-14 | 2021-09-20 | 3.08 | 3.48 | — | 3.4 | 0.010 | 1.11 | 0.0 | 0.06 | 14.20 | 0.01 | 2.296 | 4.37 | 0.00 | 4.3 | 95.7 | 0.0 | -2.13 | 0.69 | 0.85 | 2.92 | 3.4 | 0.003 | 0.62 | 0.0 | 0.04 | 15.62 | 0.00 | 2.209 | 8.64 | 2.29 | 3.1 | 96.9 | 0.0 | 1.44 | 0.92 | 0.69 | 0.86 | 2.54 | 9032 | 1160 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7YCG | 33738 | 2024-02-14 | 2022-07-01 | 3.18 | 4.71 | 3.37 | 3.5 | 0.002 | 0.50 | 0.0 | 0.03 | 24.46 | 0.00 | 1.893 | 15.83 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.94 | 0.84 | — | 3.5 | 0.007 | 0.66 | 0.0 | 0.03 | 24.51 | 0.00 | 1.855 | 32.20 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.31 | 0.95 | 0.89 | — | 8661 | 0 | 2 | 404 | 4 | 0 | 0 | logfile |
✔ | 7QH2 | 13960 | 2024-02-16 | 2021-12-10 | 2.43 | 3.08 | — | 2.8 | 0.008 | 1.01 | 0.0 | 0.06 | 16.28 | 0.01 | 1.674 | 6.99 | 2.88 | 3.3 | 96.4 | 0.2 | -4.15 | 0.84 | 0.85 | 4.97 | 2.8 | 0.003 | 0.56 | 0.0 | 0.04 | 15.32 | 0.00 | 2.002 | 7.28 | 1.33 | 2.3 | 97.6 | 0.1 | 0.20 | 1.04 | 0.84 | 0.86 | 4.52 | 16808 | 2138 | 14 | 0 | 8 | 2 | 0 | logfile |
✔ | 7RE2 | 24431 | 2024-02-17 | 2021-07-12 | 3.17 | 3.46 | — | 3.4 | 0.007 | 0.65 | 0.0 | 0.14 | 16.68 | 0.00 | 1.932 | 8.83 | 2.42 | 5.0 | 95.0 | 0.0 | -0.57 | 0.77 | 0.83 | 3.11 | 3.4 | 0.002 | 0.52 | 0.0 | 0.04 | 16.10 | 0.00 | 2.031 | 8.53 | 2.72 | 4.1 | 95.9 | 0.0 | 0.03 | 0.30 | 0.77 | 0.85 | 2.31 | 17096 | 1963 | 9 | 71 | 13 | 0 | 0 | logfile |
✔ | 7BES | 12158 | 2024-02-14 | 2020-12-24 | 2.85 | 2.95 | 2.86 | 2.9 | 0.013 | 1.03 | 0.0 | 0.05 | 13.91 | 0.00 | 2.236 | 7.96 | 0.85 | 0.3 | 99.7 | 0.0 | 0.37 | 0.73 | 0.82 | 3.32 | 2.9 | 0.003 | 0.56 | 0.0 | 0.04 | 16.11 | 0.00 | 2.010 | 9.60 | 2.22 | 0.8 | 99.2 | 0.0 | 0.46 | 1.15 | 0.73 | 0.84 | 2.94 | 9446 | 1234 | 12 | 6 | 4 | 0 | 0 | logfile |
✔ | 6UZ8 | 20953 | 2024-02-19 | 2019-11-14 | 2.84 | 3.21 | — | 3.1 | 0.008 | 1.05 | 4.0 | 0.06 | 14.60 | 0.02 | 2.298 | 2.20 | 0.17 | 4.3 | 95.7 | 0.0 | -3.69 | 0.72 | 0.84 | 3.29 | 3.1 | 0.003 | 1.06 | 0.0 | 0.04 | 15.24 | 0.00 | 2.164 | 4.54 | 1.09 | 3.2 | 96.8 | 0.0 | 1.66 | 0.41 | 0.76 | 0.87 | 2.57 | 23320 | 2936 | 8 | 0 | 16 | 0 | 0 | logfile |
✔ | 7LBE | 23252 | 2024-02-15 | 2021-01-07 | 2.9 | 3.31 | — | 3.2 | 0.003 | 0.51 | 0.0 | 0.04 | 13.44 | 0.00 | 2.200 | 3.47 | 0.00 | 2.8 | 97.2 | 0.0 | 1.20 | 0.69 | 0.82 | 3.12 | 3.2 | 0.005 | 0.64 | 0.0 | 0.05 | 15.53 | 0.00 | 2.137 | 7.73 | 2.18 | 3.8 | 96.2 | 0.0 | 0.63 | 0.43 | 0.70 | 0.85 | 2.90 | 13511 | 1653 | 13 | 0 | 27 | 0 | 0 | logfile |
✔ | 7PRU | 13610 | 2024-02-14 | 2021-09-22 | 3.2 | 3.55 | 3.24 | 3.5 | 0.010 | 1.05 | 0.0 | 0.06 | 14.87 | 0.01 | 2.128 | 9.65 | 0.00 | 6.8 | 93.2 | 0.0 | -2.01 | 0.67 | 0.83 | 2.06 | 3.5 | 0.003 | 0.66 | 0.0 | 0.04 | 16.31 | 0.00 | 2.241 | 11.11 | 1.97 | 5.4 | 94.6 | 0.0 | 0.94 | 1.27 | 0.65 | 0.84 | 1.79 | 9116 | 1164 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7BL3 | 12216 | 2024-02-21 | 2021-01-18 | 3.5 | 3.69 | — | 3.5 | 0.002 | 0.48 | 0.0 | 0.03 | 23.02 | 0.00 | 2.089 | 12.43 | 0.03 | 6.4 | 93.6 | 0.0 | -1.33 | 0.75 | 0.79 | 1.02 | 3.5 | 0.004 | 0.60 | 0.0 | 0.03 | 23.12 | 0.00 | 2.004 | 15.86 | 4.38 | 8.3 | 91.7 | 0.0 | -1.48 | 0.57 | 0.75 | 0.82 | 1.09 | 92831 | 3612 | 39 | 3021 | 2 | 27 | 0 | logfile |
✔ | 5LMV | 4083 | 2024-02-14 | 2016-08-01 | 4.9 | 6.86 | 6.64 | 6.7 | 0.008 | 1.34 | 34.0 | 0.11 | 25.94 | 0.01 | 0.977 | 14.22 | 15.18 | 9.6 | 87.9 | 2.5 | -1.98 | 0.70 | 0.58 | — | 6.7 | 0.004 | 0.79 | 0.0 | 0.04 | 24.30 | 0.01 | 1.881 | 37.21 | 0.00 | 8.0 | 91.5 | 0.5 | -1.77 | 2.22 | 0.78 | 0.77 | — | 59470 | 3124 | 30 | 1612 | 4 | 0 | 0 | logfile |
✔ | 7XSS | 33433 | 2024-02-16 | 2022-05-15 | 3.2 | 2.32 | 3.17 | 2.1 | 0.003 | 0.61 | 0.0 | 0.04 | 19.02 | 0.01 | 2.143 | 8.25 | 0.59 | 5.7 | 94.2 | 0.1 | -0.24 | 0.78 | 0.79 | 2.22 | 2.1 | 0.003 | 0.57 | 0.0 | 0.04 | 19.42 | 0.00 | 2.149 | 8.31 | 4.11 | 6.0 | 94.0 | 0.0 | 0.14 | 1.07 | 0.78 | 0.80 | 2.36 | 16847 | 1942 | 4 | 54 | 4 | 0 | 0 | logfile |
✔ | 8CY6 | 27068 | 2024-02-13 | 2022-05-23 | 3.2 | 3.98 | 3.39 | 3.6 | 0.003 | 0.50 | 0.0 | 0.04 | 10.43 | 0.00 | 2.024 | 7.15 | 0.16 | 3.0 | 96.8 | 0.2 | 0.26 | 0.82 | 0.78 | 2.02 | 3.6 | 0.004 | 0.51 | 0.0 | 0.04 | 11.71 | 0.00 | 2.000 | 7.42 | 0.73 | 4.4 | 95.6 | 0.0 | -0.08 | 0.38 | 0.84 | 0.81 | 2.04 | 56077 | 3666 | 6 | 0 | 0 | 0 | 27658 | logfile |
✔ | 6ZHY | 11221 | 2024-02-14 | 2020-06-24 | 3.0 | 3.57 | 2.97 | 3.1 | 0.005 | 0.91 | 0.0 | 0.06 | 27.25 | 0.01 | 2.316 | 3.82 | 0.21 | 1.5 | 98.5 | 0.0 | 0.65 | 0.90 | 0.87 | 4.24 | 3.1 | 0.004 | 0.62 | 0.0 | 0.03 | 28.72 | 0.00 | 2.186 | 8.63 | 3.41 | 1.6 | 98.4 | 0.0 | 3.30 | 0.58 | 0.91 | 0.90 | 3.09 | 8999 | 562 | 9 | 220 | 0 | 0 | 0 | logfile |
✔ | 8FHP | 29098 | 2024-02-13 | 2022-12-14 | 3.04 | 3.38 | 3.13 | 3.3 | 0.009 | 0.80 | 0.0 | 0.05 | 13.21 | 0.01 | 2.227 | 5.38 | 0.39 | 3.8 | 96.2 | 0.0 | -1.88 | 0.61 | 0.85 | 2.63 | 3.3 | 0.003 | 0.50 | 0.0 | 0.04 | 15.09 | 0.00 | 2.255 | 2.86 | 1.83 | 1.9 | 98.1 | 0.0 | 0.78 | 0.32 | 0.57 | 0.84 | 2.04 | 7306 | 950 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 6GYL | 0091 | 2024-02-24 | 2018-06-30 | 4.8 | 4.06 | 4.25 | 12.0 | 0.008 | 0.47 | 0.0 | 0.04 | 11.78 | 0.00 | 0.860 | 9.27 | 0.16 | 6.2 | 92.8 | 1.0 | -3.33 | 0.32 | 0.00 | — | 3.5 | 0.003 | 0.80 | 0.0 | 0.05 | 14.75 | 0.01 | 2.093 | 18.95 | 0.00 | 5.4 | 94.4 | 0.3 | -1.55 | 1.31 | 0.51 | 0.19 | — | 43409 | 5250 | 30 | 112 | 11 | 0 | 0 | logfile |
✔ | 7W6S | 32334 | 2024-02-18 | 2021-12-02 | 2.8 | 3.21 | — | 3.2 | 0.005 | 0.68 | 0.0 | 0.04 | 13.60 | 0.00 | 2.191 | 9.61 | 0.18 | 6.3 | 93.7 | 0.0 | -3.03 | 0.69 | 0.83 | 2.38 | 3.2 | 0.003 | 0.78 | 0.0 | 0.04 | 16.32 | 0.00 | 2.200 | 10.90 | 3.08 | 4.4 | 95.6 | 0.0 | 0.83 | 0.68 | 0.67 | 0.82 | 1.55 | 20268 | 2508 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KWG | 23052 | 2024-02-25 | 2020-11-30 | 3.75 | 3.89 | — | 3.8 | 0.009 | 1.43 | 1.0 | 0.07 | 23.59 | 0.01 | 2.227 | 5.46 | 2.86 | 10.7 | 88.8 | 0.4 | -5.79 | 0.80 | 0.82 | 2.01 | 3.8 | 0.007 | 0.80 | 0.0 | 0.04 | 23.32 | 0.01 | 1.934 | 19.39 | 4.36 | 10.9 | 89.1 | 0.0 | -2.58 | 1.28 | 0.80 | 0.82 | 1.50 | 51870 | 2251 | 21 | 1584 | 0 | 0 | 0 | logfile |
✔ | 7SYA | 25521 | 2024-02-25 | 2021-11-24 | 3.5 | 4.86 | 3.47 | 3.3 | 0.003 | 0.69 | 0.0 | 0.04 | 14.93 | 0.00 | 2.087 | 15.81 | 0.11 | 16.5 | 82.7 | 0.8 | -2.66 | 0.79 | 0.73 | 0.85 | 3.3 | 0.003 | 0.73 | 0.0 | 0.04 | 16.63 | 0.00 | 2.239 | 18.24 | 1.76 | 17.1 | 82.2 | 0.7 | -2.28 | 1.34 | 0.79 | 0.75 | 0.80 | 49860 | 6180 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZHX | 11220 | 2024-02-15 | 2020-06-24 | 2.5 | 3.01 | 2.43 | 2.7 | 0.005 | 0.92 | 0.0 | 0.06 | 26.79 | 0.01 | 2.203 | 2.63 | 0.46 | 1.0 | 99.0 | 0.0 | 0.63 | 0.88 | 0.90 | 5.80 | 2.7 | 0.004 | 0.60 | 0.0 | 0.03 | 28.46 | 0.00 | 2.186 | 4.95 | 2.15 | 0.9 | 99.1 | 0.0 | 2.67 | 0.45 | 0.89 | 0.92 | 4.64 | 12313 | 784 | 22 | 290 | 0 | 146 | 0 | logfile |