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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7oH4 | 12893 | 2024-02-15 | 2021-05-09 | 3.0 | 3.58 | 3.12 | 3.4 | 0.003 | 0.73 | 0.0 | 0.04 | 13.29 | 0.00 | 2.021 | 6.46 | 1.36 | 4.0 | 96.0 | 0.0 | -3.11 | 0.64 | 0.70 | 2.09 | 3.5 | 0.003 | 0.63 | 0.0 | 0.04 | 13.49 | 0.00 | 1.949 | 7.55 | 1.60 | 3.0 | 97.0 | 0.0 | -0.99 | 1.16 | 0.65 | 0.74 | 1.91 | 11535 | 1414 | 8 | 0 | 11 | 3 | 0 | logfile |
✔ | 7N0N | 24110 | 2024-02-17 | 2021-05-25 | 4.15 | 4.37 | — | 4.2 | 0.006 | 1.01 | 0.0 | 0.06 | 14.98 | 0.01 | 2.243 | 4.69 | 0.38 | 3.6 | 96.4 | 0.0 | -2.21 | 0.68 | 0.80 | — | 4.2 | 0.002 | 0.61 | 0.0 | 0.04 | 15.13 | 0.00 | 2.233 | 8.80 | 0.00 | 2.5 | 97.5 | 0.0 | 0.76 | 1.12 | 0.68 | 0.80 | — | 19632 | 2468 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6PQP | 20450 | 2024-02-18 | 2019-07-09 | 3.06 | 3.46 | 3.03 | 3.4 | 0.012 | 1.29 | 0.0 | 0.23 | 21.82 | 0.01 | 2.132 | 8.72 | 0.19 | 4.3 | 95.7 | 0.0 | -3.28 | 0.74 | 0.82 | 3.00 | 3.4 | 0.002 | 0.58 | 0.0 | 0.04 | 17.62 | 0.00 | 2.157 | 6.06 | 1.92 | 2.5 | 97.5 | 0.0 | 1.87 | 2.26 | 0.74 | 0.85 | 2.20 | 20492 | 2460 | 12 | 0 | 36 | 0 | 0 | logfile |
✔ | 7TPJ | 26057 | 2024-02-13 | 2022-01-25 | 3.46 | 3.68 | — | 3.7 | 0.004 | 0.70 | 0.0 | 0.04 | 14.42 | 0.01 | 2.159 | 9.09 | 0.00 | 5.0 | 95.0 | 0.0 | -0.01 | 0.57 | 0.69 | 1.76 | 3.7 | 0.003 | 0.62 | 0.0 | 0.04 | 16.48 | 0.00 | 2.253 | 8.15 | 1.60 | 5.0 | 95.0 | 0.0 | 0.73 | 1.42 | 0.60 | 0.72 | 1.81 | 4758 | 626 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 3JD1 | 6634 | 2024-02-19 | 2016-03-28 | 3.3 | 2.71 | — | 3.0 | 0.015 | 1.01 | 0.0 | 0.06 | 11.30 | 0.01 | 1.935 | 12.60 | 0.00 | 8.2 | 91.6 | 0.2 | -5.08 | 0.79 | 0.80 | 3.01 | 2.5 | 0.003 | 0.63 | 0.0 | 0.04 | 15.23 | 0.00 | 2.198 | 9.34 | 1.84 | 2.3 | 97.7 | 0.0 | 0.90 | 1.80 | 0.80 | 0.85 | 2.13 | 23814 | 2976 | 12 | 0 | 12 | 0 | 0 | logfile |
✔ | 7Y82 | 33678 | 2024-02-15 | 2022-06-22 | 2.83 | 2.38 | 2.88 | 3.0 | 0.003 | 0.57 | 0.0 | 0.04 | 20.35 | 0.00 | 1.887 | 16.18 | 4.59 | 1.8 | 98.2 | 0.0 | 0.77 | 0.77 | 0.81 | 2.77 | 3.0 | 0.003 | 0.56 | 0.0 | 0.04 | 20.29 | 0.00 | 1.916 | 15.34 | 2.89 | 2.4 | 97.6 | 0.0 | 0.99 | 0.27 | 0.70 | 0.79 | 2.90 | 12278 | 1341 | 4 | 66 | 5 | 0 | 0 | logfile |
✔ | 7LGW | 23331 | 2024-02-15 | 2021-01-21 | 2.7 | 3.18 | — | 3.1 | 0.003 | 0.95 | 0.0 | 0.04 | 12.09 | 0.00 | 2.184 | 7.05 | 0.71 | 2.4 | 97.6 | 0.0 | 1.33 | 0.65 | 0.83 | 5.03 | 3.1 | 0.003 | 0.52 | 0.0 | 0.04 | 14.30 | 0.00 | 2.178 | 6.06 | 1.41 | 1.3 | 98.7 | 0.0 | 1.07 | 0.35 | 0.61 | 0.83 | 4.46 | 11390 | 1360 | 6 | 0 | 95 | 30 | 0 | logfile |
✔ | 5oiK | 3817 | 2024-02-23 | 2017-07-18 | 3.7 | 4.15 | 3.66 | 3.6 | 0.011 | 1.07 | 0.0 | 0.06 | 12.58 | 0.01 | 1.841 | 11.63 | 0.33 | 4.3 | 95.5 | 0.2 | -3.26 | 0.89 | 0.83 | 2.24 | 3.7 | 0.004 | 0.73 | 0.0 | 0.04 | 15.21 | 0.00 | 1.984 | 13.65 | 1.79 | 4.6 | 95.4 | 0.0 | 0.45 | 2.05 | 0.89 | 0.85 | 1.53 | 37988 | 4513 | 23 | 106 | 9 | 0 | 0 | logfile |
✔ | 7EJK | 31162 | 2024-02-14 | 2021-04-02 | 3.4 | 3.65 | — | 3.5 | 0.006 | 0.77 | 0.0 | 0.05 | 13.04 | 0.00 | 1.495 | 12.36 | 0.43 | 5.2 | 94.8 | 0.0 | -0.01 | 0.70 | 0.83 | 2.22 | 3.5 | 0.003 | 0.78 | 0.0 | 0.04 | 15.64 | 0.00 | 2.100 | 10.78 | 3.21 | 5.0 | 95.0 | 0.0 | 0.19 | 1.32 | 0.71 | 0.85 | 1.80 | 8586 | 1093 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7USF | 26737 | 2024-02-17 | 2022-04-25 | 3.5 | 4.05 | 3.59 | 3.9 | 0.003 | 0.55 | 0.0 | 0.04 | 19.62 | 0.00 | 2.017 | 10.80 | 0.12 | 2.5 | 97.5 | 0.0 | 0.79 | 0.79 | 0.78 | 2.43 | 3.9 | 0.003 | 0.60 | 0.0 | 0.04 | 20.90 | 0.00 | 2.076 | 10.14 | 2.53 | 3.4 | 96.6 | 0.0 | 0.90 | 1.43 | 0.81 | 0.82 | 2.09 | 18988 | 1984 | 22 | 152 | 10 | 0 | 0 | logfile |
✔ | 7Z14 | 14440 | 2024-02-16 | 2022-02-24 | 3.15 | 3.57 | — | 3.5 | 0.004 | 0.72 | 1.0 | 0.05 | 14.57 | 0.00 | 2.128 | 10.06 | 0.00 | 4.4 | 95.6 | 0.0 | -0.09 | 0.62 | 0.79 | 3.59 | 3.5 | 0.003 | 0.64 | 2.0 | 0.04 | 15.06 | 0.00 | 2.213 | 9.65 | 2.15 | 3.6 | 96.4 | 0.0 | 0.44 | 1.20 | 0.64 | 0.82 | 3.29 | 15856 | 1913 | 13 | 0 | 28 | 0 | 0 | logfile |
✔ | 7K65 | 22689 | 2024-02-14 | 2020-09-18 | 3.4 | 3.95 | 3.54 | 3.9 | 0.016 | 0.86 | 0.0 | 0.07 | 14.99 | 0.00 | 2.213 | 8.32 | 0.00 | 2.9 | 97.1 | 0.0 | -1.91 | 0.54 | 0.76 | 2.44 | 3.9 | 0.003 | 0.66 | 0.0 | 0.04 | 16.37 | 0.00 | 2.178 | 13.32 | 2.65 | 5.7 | 94.3 | 0.0 | 0.56 | 0.52 | 0.53 | 0.76 | 1.86 | 8796 | 1120 | 4 | 0 | 11 | 0 | 0 | logfile |
✔ | 7FB0 | 31511 | 2024-02-18 | 2021-07-08 | 3.4 | 4.00 | — | 3.9 | 0.010 | 0.88 | 0.0 | 0.05 | 14.09 | 0.01 | 1.931 | 19.74 | 0.47 | 11.5 | 88.5 | 0.0 | -4.69 | 0.77 | 0.80 | 1.95 | 3.9 | 0.004 | 0.62 | 0.0 | 0.04 | 15.34 | 0.00 | 2.090 | 10.79 | 2.73 | 5.5 | 94.5 | 0.0 | -1.24 | 0.49 | 0.77 | 0.80 | 1.66 | 22876 | 2926 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MiD | 23847 | 2024-02-14 | 2021-04-16 | 3.56 | 4.10 | — | 3.9 | 0.010 | 1.02 | 0.0 | 0.06 | 20.37 | 0.01 | 0.918 | 14.61 | 5.73 | 8.6 | 91.3 | 0.1 | -1.30 | 0.76 | 0.66 | 0.22 | 4.0 | 0.004 | 0.73 | 0.0 | 0.04 | 20.06 | 0.00 | 2.051 | 11.87 | 2.09 | 6.0 | 94.0 | 0.0 | 0.11 | 1.87 | 0.81 | 0.80 | 0.71 | 9789 | 1080 | 11 | 57 | 6 | 0 | 0 | logfile |
✔ | 7FB3 | 31513 | 2024-02-18 | 2021-07-08 | 3.1 | 3.73 | — | 3.7 | 0.003 | 0.65 | 0.0 | 0.04 | 14.25 | 0.00 | 2.114 | 9.15 | 0.23 | 8.2 | 91.8 | 0.0 | -4.11 | 0.74 | 0.81 | 2.06 | 3.6 | 0.003 | 0.59 | 0.0 | 0.04 | 15.89 | 0.00 | 2.103 | 8.69 | 1.91 | 6.5 | 93.5 | 0.0 | -1.35 | 1.43 | 0.72 | 0.80 | 1.96 | 22920 | 2936 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7L0S | 23102 | 2024-02-13 | 2020-12-12 | 4.5 | 4.35 | 4.13 | 4.2 | 0.008 | 1.34 | 2.0 | 0.08 | 13.52 | 0.01 | 2.107 | 9.65 | 1.39 | 6.0 | 94.0 | 0.0 | -3.19 | 0.61 | 0.63 | — | 4.2 | 0.004 | 0.81 | 0.0 | 0.05 | 13.28 | 0.00 | 2.097 | 17.20 | 0.00 | 4.4 | 95.6 | 0.0 | -0.01 | 3.57 | 0.64 | 0.73 | — | 7906 | 1001 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WNX | 32634 | 2024-02-15 | 2022-01-20 | 3.36 | 3.85 | — | 3.7 | 0.033 | 0.94 | 0.0 | 0.18 | 14.67 | 0.00 | 2.209 | 8.77 | 0.50 | 8.2 | 91.5 | 0.3 | -2.32 | 0.64 | 0.83 | 1.69 | 3.7 | 0.005 | 0.77 | 0.0 | 0.09 | 15.41 | 0.01 | 1.772 | 16.92 | 1.50 | 8.1 | 91.9 | 0.0 | -1.84 | 0.31 | 0.66 | 0.85 | 1.55 | 5643 | 734 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7UT1 | 26744 | 2024-02-21 | 2022-04-26 | 3.8 | 4.42 | 3.91 | 4.1 | 0.003 | 0.55 | 0.0 | 0.04 | 20.16 | 0.00 | 2.148 | 11.32 | 0.00 | 3.8 | 96.2 | 0.0 | 0.17 | 0.82 | 0.81 | 1.73 | 4.1 | 0.004 | 0.63 | 0.0 | 0.04 | 21.51 | 0.00 | 2.040 | 14.28 | 2.57 | 5.1 | 94.9 | 0.0 | 0.23 | 0.44 | 0.82 | 0.83 | 1.67 | 31319 | 3147 | 40 | 298 | 12 | 0 | 0 | logfile |
✔ | 6oMF | 20090 | 2024-02-21 | 2019-04-18 | 3.26 | 3.79 | — | 3.7 | 0.012 | 1.03 | 1.0 | 0.06 | 19.65 | 0.01 | 1.800 | 9.63 | 12.34 | 7.2 | 92.6 | 0.2 | -4.28 | 0.70 | 0.72 | 1.43 | 3.7 | 0.003 | 0.83 | 2.0 | 0.04 | 19.22 | 0.00 | 2.044 | 12.17 | 4.95 | 5.9 | 94.1 | 0.0 | -1.15 | 0.57 | 0.72 | 0.75 | 1.13 | 30251 | 3616 | 10 | 92 | 3 | 0 | 0 | logfile |
✔ | 7K48 | 22661 | 2024-02-14 | 2020-09-15 | 3.6 | 4.15 | 4.07 | 4.1 | 0.010 | 1.23 | 0.0 | 0.06 | 17.88 | 0.01 | 2.233 | 5.29 | 3.40 | 7.4 | 92.6 | 0.0 | -3.52 | 0.48 | 0.75 | 1.45 | 4.1 | 0.004 | 0.85 | 0.0 | 0.04 | 18.86 | 0.00 | 2.135 | 21.46 | 4.36 | 6.2 | 93.8 | 0.0 | -0.19 | 1.94 | 0.49 | 0.76 | 1.76 | 8480 | 1048 | 8 | 0 | 0 | 0 | 0 | logfile |