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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7URT | 26718 | 2024-02-13 | 2022-04-22 | 2.39 | 2.51 | 2.52 | 2.5 | 0.008 | 0.96 | 0.0 | 0.07 | 13.99 | 0.01 | 0.512 | 6.62 | 1.60 | 0.9 | 99.1 | 0.0 | 1.22 | 0.71 | 0.82 | 4.21 | 2.5 | 0.037 | 3.41 | 17.0 | 0.29 | 25.51 | 0.01 | 0.387 | 10.75 | 2.97 | 1.5 | 98.5 | 0.0 | 1.74 | 1.11 | 0.69 | 0.81 | 2.97 | 107880 | 13260 | 60 | 0 | 120 | 0 | 0 | logfile |
✔ | 6S6B | 10102 | 2024-02-16 | 2019-07-02 | 2.75 | 3.35 | 3.07 | 3.2 | 0.005 | 0.76 | 0.0 | 0.05 | 14.91 | 0.00 | 1.961 | 19.06 | 0.15 | 15.3 | 84.3 | 0.4 | -5.13 | 0.77 | 0.82 | 2.59 | 3.2 | 0.006 | 0.96 | 3.0 | 0.05 | 17.14 | 0.01 | 1.866 | 22.24 | 3.51 | 14.4 | 85.4 | 0.1 | -2.98 | 0.66 | 0.74 | 0.85 | 2.00 | 66914 | 8194 | 39 | 51 | 1 | 0 | 0 | logfile |
✔ | 6LTJ | 0974 | 2024-02-22 | 2020-01-22 | 3.7 | 4.16 | — | 15.0 | 0.010 | 1.08 | 12.0 | 0.07 | 22.18 | 0.01 | 2.173 | 14.05 | 2.63 | 6.4 | 93.3 | 0.3 | -3.67 | 0.46 | 0.08 | 0.04 | 3.6 | 0.004 | 0.82 | 0.0 | 0.04 | 22.35 | 0.01 | 1.996 | 24.67 | 2.10 | 4.8 | 95.2 | 0.0 | -0.58 | 1.60 | 0.60 | 0.29 | 0.45 | 34283 | 3656 | 21 | 238 | 1 | 0 | 0 | logfile |
✔ | 6HJN | 0234 | 2024-02-15 | 2018-09-04 | 3.3 | 3.88 | 3.28 | 3.6 | 0.008 | 1.23 | 3.0 | 0.11 | 15.25 | 0.02 | 1.734 | 5.04 | 2.80 | 8.9 | 91.1 | 0.0 | -3.22 | 0.91 | 0.91 | 4.09 | 3.6 | 0.003 | 0.68 | 0.0 | 0.04 | 13.75 | 0.00 | 2.093 | 6.28 | 1.64 | 8.3 | 91.7 | 0.0 | -0.19 | 0.55 | 0.89 | 0.89 | 3.22 | 12309 | 1488 | 24 | 0 | 48 | 0 | 0 | logfile |
✔ | 6REB | 4848 | 2024-02-13 | 2019-04-12 | 3.2 | 3.24 | — | 3.3 | 0.011 | 1.02 | 0.0 | 0.06 | 14.48 | 0.01 | 2.140 | 5.40 | 0.37 | 4.8 | 95.1 | 0.1 | -3.95 | 0.70 | 0.84 | 3.18 | 3.3 | 0.003 | 0.64 | 1.0 | 0.04 | 15.80 | 0.00 | 2.044 | 10.48 | 2.17 | 3.6 | 96.3 | 0.1 | 0.03 | 1.15 | 0.71 | 0.87 | 2.46 | 53756 | 7104 | 37 | 0 | 11 | 0 | 0 | logfile |
✔ | 6W1N | 21513 | 2024-02-13 | 2020-03-04 | 4.0 | 4.43 | 4.16 | 4.1 | 0.002 | 0.55 | 0.0 | 0.04 | 12.17 | 0.00 | 2.226 | 6.50 | 0.41 | 1.4 | 98.6 | 0.0 | -0.42 | 0.72 | 0.75 | — | 4.1 | 0.003 | 0.76 | 0.0 | 0.04 | 14.18 | 0.00 | 2.112 | 12.42 | 2.20 | 3.1 | 96.9 | 0.0 | 0.78 | 0.75 | 0.74 | 0.80 | — | 105232 | 13984 | 12 | 0 | 1320 | 0 | 0 | logfile |
✔ | 6RDX | 4834 | 2024-02-13 | 2019-04-12 | 3.9 | 3.93 | 3.89 | 3.9 | 0.010 | 1.05 | 0.0 | 0.06 | 15.09 | 0.01 | 2.050 | 6.72 | 0.55 | 5.8 | 94.0 | 0.2 | -4.32 | 0.63 | 0.79 | 1.46 | 3.9 | 0.003 | 0.78 | 1.0 | 0.04 | 16.74 | 0.00 | 1.884 | 14.59 | 3.37 | 5.0 | 94.8 | 0.1 | -0.39 | 1.23 | 0.64 | 0.81 | 1.08 | 53748 | 7103 | 37 | 0 | 11 | 0 | 0 | logfile |
✔ | 7TDT | 25838 | 2024-02-16 | 2022-01-03 | 4.0 | 4.13 | — | 4.0 | 0.002 | 0.57 | 0.0 | 0.04 | 13.40 | 0.00 | 1.908 | 10.09 | 0.00 | 8.2 | 91.7 | 0.1 | -0.53 | 0.63 | 0.69 | — | 4.0 | 0.003 | 0.79 | 0.0 | 0.04 | 15.88 | 0.00 | 2.135 | 15.05 | 2.31 | 9.0 | 91.0 | 0.0 | -0.94 | 1.33 | 0.64 | 0.72 | — | 14444 | 1818 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6TB4 | 10438 | 2024-02-24 | 2019-10-31 | 3.8 | 4.42 | 3.85 | 3.8 | 0.008 | 1.08 | 1.0 | 0.06 | 15.27 | 0.01 | 2.044 | 11.25 | 2.05 | 9.8 | 89.5 | 0.8 | -5.38 | 0.70 | 0.55 | 0.41 | 3.8 | 0.004 | 0.83 | 1.0 | 0.05 | 16.04 | 0.00 | 1.797 | 15.47 | 2.27 | 8.5 | 91.4 | 0.1 | -0.41 | 0.98 | 0.79 | 0.75 | 0.49 | 40740 | 5275 | 13 | 0 | 76 | 0 | 0 | logfile |
✘ | 7A4P | 11640 | 2024-02-25 | 2020-08-20 | 4.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 48636 | 4086 | 38 | 0 | 337 | 0 | 0 | logfile |
✔ | 6XBY | 22122 | 2024-02-14 | 2020-06-07 | 3.79 | 3.90 | — | 3.8 | 0.007 | 1.08 | 21.0 | 0.06 | 15.41 | 0.01 | 1.614 | 7.16 | 0.41 | 5.5 | 94.4 | 0.2 | -5.89 | 0.73 | 0.84 | 2.00 | 3.8 | 0.005 | 0.79 | 4.0 | 0.04 | 16.61 | 0.00 | 1.891 | 14.21 | 2.93 | 5.2 | 94.7 | 0.1 | -0.89 | 0.67 | 0.74 | 0.84 | 1.39 | 57516 | 7765 | 37 | 0 | 15 | 0 | 0 | logfile |
✔ | 7UNU | 26633 | 2024-02-27 | 2022-04-11 | 2.9 | 3.16 | 2.89 | 3.1 | 0.007 | 0.70 | 0.0 | 0.04 | 22.66 | 0.02 | 1.895 | 6.14 | 0.20 | 8.0 | 91.6 | 0.4 | -1.70 | 0.81 | 0.89 | 3.42 | 3.1 | 0.005 | 0.72 | 4.0 | 0.04 | 22.80 | 0.01 | 1.751 | 7.38 | 3.00 | 6.4 | 93.2 | 0.4 | -0.94 | 2.56 | 0.79 | 0.89 | 2.71 | 149259 | 6488 | 86 | 4606 | 609 | 201 | 0 | logfile |
✔ | 8D8Q | 27254 | 2024-02-13 | 2022-06-08 | 4.2 | 3.68 | 34.06 | 3.7 | 0.012 | 1.23 | 0.0 | 0.05 | 11.02 | 0.01 | 2.139 | 1.66 | 0.53 | 1.5 | 98.3 | 0.2 | 2.20 | 0.67 | 0.74 | — | 3.6 | 0.003 | 0.69 | 0.0 | 0.04 | 12.90 | 0.00 | 2.189 | 12.92 | 0.00 | 4.9 | 95.1 | 0.0 | -0.62 | 1.01 | 0.67 | 0.75 | — | 5202 | 669 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 6oDJ | 20021 | 2024-02-19 | 2019-03-26 | 3.5 | 3.75 | — | 3.7 | 0.009 | 1.50 | 0.0 | 0.07 | 11.32 | 0.01 | 2.438 | 2.03 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.81 | 0.81 | — | 3.7 | 0.012 | 1.73 | 0.0 | 0.06 | 7.96 | 0.00 | 2.090 | 10.56 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.60 | 0.82 | 0.83 | — | 25415 | 0 | 17 | 0 | 5083 | 0 | 0 | logfile |
✔ | 6REE | 4851 | 2024-02-13 | 2019-04-12 | 3.1 | 3.13 | — | 3.2 | 0.006 | 0.86 | 0.0 | 0.05 | 14.21 | 0.01 | 2.220 | 5.17 | 0.14 | 4.4 | 95.5 | 0.1 | -3.82 | 0.71 | 0.83 | 2.80 | 3.2 | 0.003 | 0.58 | 0.0 | 0.04 | 15.81 | 0.00 | 1.923 | 8.96 | 2.15 | 3.7 | 96.2 | 0.1 | 0.25 | 0.50 | 0.72 | 0.87 | 2.43 | 53756 | 7104 | 37 | 0 | 11 | 0 | 0 | logfile |
✔ | 6HJP | 0235 | 2024-02-18 | 2018-09-04 | 3.3 | 3.74 | 3.29 | 3.5 | 0.008 | 1.17 | 9.0 | 0.09 | 14.76 | 0.02 | 2.158 | 3.91 | 2.40 | 7.9 | 91.9 | 0.2 | -2.34 | 0.88 | 0.90 | 3.43 | 3.5 | 0.003 | 0.65 | 0.0 | 0.04 | 13.71 | 0.00 | 2.081 | 6.40 | 2.23 | 5.0 | 95.0 | 0.0 | 0.00 | 0.61 | 0.87 | 0.89 | 2.82 | 22134 | 2784 | 30 | 0 | 51 | 0 | 0 | logfile |
✔ | 7QG8 | 13952 | 2024-02-27 | 2021-12-07 | 3.97 | 7.71 | — | 4.0 | 0.016 | 1.62 | 61.0 | 0.11 | 22.93 | 0.01 | 0.770 | 4.86 | 1.61 | 8.6 | 90.4 | 1.0 | -3.97 | 0.64 | 0.40 | 0.16 | 4.0 | 0.003 | 0.74 | 0.0 | 0.04 | 24.56 | 0.01 | 1.902 | 35.77 | 2.68 | 10.2 | 89.7 | 0.1 | -2.28 | 3.35 | 0.84 | 0.76 | -0.02 | 147108 | 5936 | 58 | 4695 | 3 | 9 | 0 | logfile |
✔ | 7Y3G | 33594 | 2024-02-13 | 2022-06-10 | 2.77 | 2.32 | 2.89 | 2.1 | 0.004 | 0.66 | 0.0 | 0.04 | 16.44 | 0.01 | 2.029 | 7.02 | 3.04 | 3.9 | 96.1 | 0.0 | 0.49 | 0.79 | 0.81 | 2.50 | 2.1 | 0.003 | 0.60 | 0.0 | 0.04 | 16.61 | 0.00 | 2.139 | 5.11 | 3.86 | 3.4 | 96.6 | 0.0 | 0.84 | 1.15 | 0.80 | 0.82 | 2.04 | 7864 | 1001 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6QDW | 4531 | 2024-02-20 | 2019-01-03 | 2.83 | 2.94 | 2.82 | 2.9 | 0.013 | 1.10 | 0.0 | 0.06 | 24.58 | 0.01 | 1.901 | 6.27 | 1.25 | 7.1 | 92.7 | 0.2 | -4.19 | 0.71 | 0.83 | 2.54 | 2.9 | 0.004 | 0.63 | 0.0 | 0.04 | 24.24 | 0.00 | 2.053 | 10.24 | 3.91 | 5.5 | 94.5 | 0.0 | -1.14 | 1.27 | 0.77 | 0.89 | 3.24 | 90690 | 3127 | 32 | 3081 | 0 | 0 | 0 | logfile |
✔ | 7LV0 | 23528 | 2024-02-25 | 2021-02-23 | 3.2 | 3.59 | — | 3.2 | 0.012 | 1.25 | 0.0 | 0.10 | 23.31 | 0.02 | 1.414 | 29.31 | 3.83 | 19.0 | 79.0 | 2.0 | -4.79 | 0.81 | 0.82 | 1.87 | 3.2 | 0.005 | 0.75 | 0.0 | 0.04 | 23.60 | 0.01 | 2.022 | 18.34 | 7.76 | 14.6 | 85.3 | 0.1 | -2.80 | 0.48 | 0.81 | 0.84 | 1.23 | 147330 | 5851 | 60 | 4734 | 0 | 0 | 0 | logfile |