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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8PBY | 17588 | 2024-02-25 | 2023-06-09 | 3.7 | 4.03 | 3.80 | 4.0 | 0.003 | 0.56 | 0.0 | 0.04 | 13.88 | 0.00 | 1.886 | 18.49 | 0.05 | 8.4 | 91.4 | 0.2 | -2.20 | 0.65 | 0.59 | 1.00 | 4.0 | 0.003 | 0.60 | 0.0 | 0.04 | 15.69 | 0.00 | 1.878 | 20.46 | 1.46 | 8.7 | 91.0 | 0.2 | -2.31 | 1.20 | 0.67 | 0.62 | 0.87 | 33480 | 2187 | 2 | 0 | 0 | 0 | 16474 | logfile |
✔ | 8SQJ | 40707 | 2024-02-19 | 2023-05-04 | 3.06 | 3.29 | 3.09 | 3.3 | 0.006 | 0.51 | 0.0 | 0.04 | 16.18 | 0.00 | 1.600 | 3.63 | 3.69 | 3.9 | 96.1 | 0.0 | -0.63 | 0.69 | 0.83 | 4.24 | 3.3 | 0.002 | 0.48 | 0.0 | 0.04 | 17.11 | 0.00 | 1.992 | 3.51 | 2.67 | 3.1 | 96.9 | 0.0 | 0.31 | 0.60 | 0.71 | 0.84 | 3.85 | 26044 | 1486 | 16 | 85 | 3 | 139 | 12389 | logfile |
✔ | 8CAD | 16524 | 2024-02-15 | 2023-01-24 | 2.85 | 2.57 | 2.81 | 2.7 | 0.003 | 0.59 | 0.0 | 0.05 | 11.54 | 0.00 | 2.115 | 5.66 | 0.00 | 1.8 | 98.2 | 0.0 | 0.82 | 0.69 | 0.81 | 3.81 | 2.6 | 0.005 | 0.62 | 0.0 | 0.04 | 14.33 | 0.00 | 1.858 | 5.16 | 2.21 | 4.4 | 95.6 | 0.0 | 0.28 | 0.62 | 0.70 | 0.85 | 4.11 | 64084 | 3816 | 30 | 0 | 78 | 766 | 31062 | logfile |
✘ | 8SKV | 40568 | 2024-02-19 | 2023-04-20 | 3.1 | 3.28 | 3.10 | 3.3 | 0.003 | 0.57 | 0.0 | 0.04 | 14.90 | 0.00 | 2.020 | 4.46 | 0.08 | 5.9 | 94.0 | 0.1 | -0.35 | 0.67 | 0.75 | 2.89 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 23561 | 1632 | 15 | 0 | 15 | 0 | 11341 | logfile |
✔ | 8FMW | 29298 | 2024-02-26 | 2022-12-25 | 2.86 | 3.40 | 3.00 | 3.1 | 0.005 | 0.86 | 0.0 | 0.08 | 22.49 | 0.00 | 2.015 | 7.35 | 0.04 | 6.5 | 93.5 | 0.0 | -0.67 | 0.87 | 0.86 | 2.66 | 3.1 | 0.003 | 0.88 | 0.0 | 0.08 | 22.71 | 0.00 | 2.033 | 11.13 | 2.50 | 4.5 | 95.5 | 0.0 | 0.20 | 1.17 | 0.88 | 0.88 | 2.15 | 147910 | 6347 | 62 | 4646 | 4 | 0 | 0 | logfile |
✔ | 8FHS | 29102 | 2024-02-18 | 2022-12-15 | 3.3 | 3.38 | 3.32 | 3.4 | 0.006 | 0.59 | 0.0 | 0.10 | 17.86 | 0.00 | 2.203 | 8.65 | 0.71 | 5.4 | 94.5 | 0.1 | -0.85 | 0.59 | 0.82 | 2.60 | 3.4 | 0.003 | 0.64 | 0.0 | 0.05 | 17.05 | 0.00 | 2.158 | 8.53 | 2.30 | 5.5 | 94.5 | 0.0 | -0.26 | 0.32 | 0.58 | 0.83 | 2.33 | 20975 | 2554 | 10 | 0 | 25 | 0 | 0 | logfile |
✔ | 8TZo | 41764 | 2024-02-14 | 2023-08-27 | 3.1 | 3.45 | 3.14 | 3.4 | 0.004 | 0.70 | 0.0 | 0.04 | 17.02 | 0.00 | 2.252 | 5.32 | 0.22 | 3.1 | 96.9 | 0.0 | 0.82 | 0.62 | 0.85 | 2.93 | 3.4 | 0.003 | 0.52 | 0.0 | 0.04 | 15.45 | 0.00 | 2.256 | 6.24 | 2.05 | 3.5 | 96.5 | 0.0 | 0.88 | 0.87 | 0.61 | 0.84 | 2.82 | 8737 | 1070 | 7 | 0 | 10 | 0 | 0 | logfile |
✔ | 8SL1 | 40571 | 2024-02-13 | 2023-04-20 | 3.13 | 3.37 | 3.20 | 3.4 | 0.003 | 0.61 | 0.0 | 0.06 | 16.40 | 0.00 | 2.223 | 8.71 | 0.68 | 5.0 | 95.0 | 0.0 | -0.41 | 0.64 | 0.73 | 2.11 | 3.4 | 0.002 | 0.56 | 0.0 | 0.04 | 16.58 | 0.00 | 2.121 | 8.55 | 2.32 | 4.0 | 96.0 | 0.0 | 0.28 | 0.35 | 0.63 | 0.73 | 1.95 | 6608 | 843 | 3 | 0 | 6 | 1 | 0 | logfile |
✔ | 8FN2 | 29304 | 2024-02-20 | 2022-12-26 | 3.4 | 3.90 | 3.78 | 3.3 | 0.006 | 0.88 | 0.0 | 0.10 | 21.94 | 0.00 | 2.063 | 7.04 | 0.00 | 7.0 | 93.0 | 0.0 | -1.00 | 0.79 | 0.79 | 1.35 | 3.3 | 0.005 | 0.98 | 0.0 | 0.10 | 22.80 | 0.00 | 1.985 | 16.32 | 3.30 | 6.4 | 93.6 | 0.0 | -0.54 | 2.30 | 0.82 | 0.86 | 1.34 | 89742 | 3633 | 36 | 2874 | 2 | 0 | 0 | logfile |
✔ | 8GUi | 34274 | 2024-02-15 | 2022-09-12 | 2.81 | 3.24 | 2.87 | 3.1 | 0.004 | 0.58 | 0.0 | 0.04 | 27.52 | 0.00 | 2.109 | 9.47 | 0.13 | 2.6 | 97.4 | 0.0 | 1.95 | 0.86 | 0.86 | 3.13 | 3.1 | 0.005 | 0.63 | 0.0 | 0.04 | 28.35 | 0.00 | 2.191 | 11.49 | 2.87 | 3.3 | 96.7 | 0.0 | 2.26 | 0.33 | 0.87 | 0.88 | 2.98 | 13348 | 920 | 14 | 294 | 4 | 0 | 0 | logfile |
✔ | 8K2X | 36842 | 2024-02-14 | 2023-07-14 | 3.2 | 3.52 | 3.20 | 3.4 | 0.003 | 0.57 | 0.0 | 0.04 | 16.75 | 0.00 | 2.283 | 9.17 | 0.00 | 4.6 | 95.4 | 0.0 | 0.69 | 0.83 | 0.89 | 2.38 | 3.4 | 0.003 | 0.57 | 0.0 | 0.04 | 17.17 | 0.00 | 2.121 | 8.49 | 3.85 | 5.4 | 94.6 | 0.0 | 0.73 | 0.24 | 0.83 | 0.90 | 2.55 | 8900 | 1138 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 8T3Y | 41016 | 2024-02-15 | 2023-06-08 | 3.47 | 3.65 | 3.22 | 3.4 | 0.004 | 0.64 | 0.0 | 0.04 | 26.54 | 0.00 | 2.284 | 6.78 | 1.74 | 2.8 | 97.2 | 0.0 | -1.27 | 0.87 | 0.87 | 2.24 | 3.3 | 0.005 | 0.63 | 0.0 | 0.04 | 26.97 | 0.00 | 2.165 | 5.60 | 2.95 | 2.8 | 97.2 | 0.0 | 0.93 | 0.60 | 0.88 | 0.90 | 2.15 | 13001 | 886 | 14 | 292 | 4 | 0 | 0 | logfile |
✔ | 8HGL | 34741 | 2024-02-22 | 2022-11-15 | 2.9 | 3.56 | 2.97 | 3.2 | 0.006 | 0.67 | 0.0 | 0.05 | 14.18 | 0.00 | 2.181 | 7.33 | 0.00 | 5.3 | 94.7 | 0.0 | -0.39 | 0.81 | 0.77 | 2.77 | 3.2 | 0.003 | 0.60 | 0.0 | 0.04 | 14.62 | 0.00 | 2.164 | 8.23 | 1.40 | 4.4 | 95.6 | 0.0 | 0.00 | 0.56 | 0.85 | 0.85 | 2.70 | 34170 | 4317 | 24 | 0 | 60 | 0 | 0 | logfile |
✔ | 8i3U | 35156 | 2024-02-13 | 2023-01-18 | 3.6 | 3.90 | 3.39 | 3.8 | 0.002 | 0.54 | 0.0 | 0.04 | 9.20 | 0.00 | 2.198 | 8.85 | 1.09 | 1.9 | 98.1 | 0.0 | -0.52 | 0.64 | 0.75 | 3.16 | 3.8 | 0.003 | 0.64 | 0.0 | 0.04 | 15.29 | 0.01 | 2.181 | 9.15 | 4.90 | 5.3 | 94.7 | 0.0 | -0.61 | 0.73 | 0.69 | 0.78 | 2.69 | 3408 | 437 | 4 | 0 | 1 | 0 | 0 | logfile |
✘ | 7YFC | 33785 | 2024-02-14 | 2022-07-08 | 3.0 | 3.40 | 3.05 | 3.4 | 0.005 | 0.66 | 0.0 | 0.04 | 18.01 | 0.00 | 2.198 | 5.98 | 0.09 | 2.5 | 97.5 | 0.0 | 1.05 | 0.65 | 0.82 | 3.01 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9882 | 1262 | 7 | 0 | 2 | 0 | 0 | logfile |
✔ | 8EKS | 28212 | 2024-02-18 | 2022-09-21 | 3.1 | 3.47 | 3.18 | 3.5 | 0.003 | 0.62 | 0.0 | 0.04 | 13.55 | 0.00 | 2.215 | 3.64 | 0.00 | 1.9 | 98.1 | 0.0 | -2.29 | 0.72 | 0.84 | 3.39 | 3.5 | 0.002 | 0.44 | 0.0 | 0.03 | 14.78 | 0.00 | 2.115 | 5.52 | 0.77 | 1.9 | 98.1 | 0.0 | 2.06 | 0.38 | 0.66 | 0.83 | 3.60 | 20484 | 2504 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 8iDD | 35364 | 2024-02-14 | 2023-02-12 | 4.0 | 4.48 | 3.92 | 4.1 | 0.004 | 1.02 | 0.0 | 0.06 | 12.75 | 0.00 | 2.302 | 5.78 | 0.24 | 4.7 | 95.3 | 0.0 | -3.26 | 0.74 | 0.78 | — | 4.1 | 0.002 | 0.67 | 0.0 | 0.04 | 13.84 | 0.00 | 2.191 | 14.44 | 2.84 | 4.7 | 95.3 | 0.0 | -0.85 | 0.42 | 0.74 | 0.79 | — | 8768 | 1199 | 7 | 0 | 2 | 0 | 0 | logfile |
✔ | 7Y59 | 33613 | 2024-02-24 | 2022-06-16 | 4.51 | 4.79 | 4.61 | 4.6 | 0.003 | 0.64 | 0.0 | 0.04 | 14.92 | 0.00 | 2.117 | 15.86 | 0.00 | 8.1 | 91.5 | 0.4 | -0.24 | 0.70 | 0.73 | — | 4.6 | 0.004 | 0.75 | 0.0 | 0.05 | 14.52 | 0.00 | 2.077 | 18.71 | 0.00 | 7.9 | 91.7 | 0.4 | -0.92 | 1.52 | 0.73 | 0.79 | — | 41564 | 5385 | 16 | 0 | 12 | 0 | 0 | logfile |
✔ | 8PBX | 17587 | 2024-02-25 | 2023-06-09 | 3.3 | 3.77 | 3.44 | 3.7 | 0.005 | 0.59 | 0.0 | 0.04 | 15.13 | 0.00 | 1.897 | 11.63 | 0.26 | 6.5 | 93.4 | 0.0 | -0.66 | 0.70 | 0.75 | 2.64 | 3.7 | 0.004 | 0.56 | 0.0 | 0.04 | 15.69 | 0.00 | 1.889 | 13.28 | 1.41 | 7.3 | 92.7 | 0.0 | -1.09 | 0.28 | 0.68 | 0.75 | 2.60 | 33448 | 2187 | 2 | 0 | 0 | 0 | 16455 | logfile |
✘ | 8BLo | 16110 | 2024-02-14 | 2022-11-10 | 2.9 | 3.05 | 2.97 | 3.1 | 0.007 | 0.69 | 0.0 | 0.04 | 17.38 | 0.00 | 2.328 | 7.94 | 0.98 | 2.9 | 96.9 | 0.3 | -1.47 | 0.67 | 0.87 | 4.00 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8487 | 1056 | 9 | 0 | 24 | 18 | 0 | logfile |