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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7E2G | 30956 | 2024-03-11 | 2021-02-05 | 3.61 | 3.75 | — | 3.7 | 0.005 | 0.72 | 0.0 | 0.06 | 13.57 | 0.00 | 2.132 | 13.35 | 0.14 | 9.8 | 90.2 | 0.0 | -2.91 | 0.62 | 0.82 | 1.67 | 3.7 | 0.002 | 0.67 | 0.0 | 0.04 | 14.59 | 0.00 | 2.230 | 8.24 | 2.04 | 8.3 | 91.7 | 0.0 | 0.19 | 0.40 | 0.62 | 0.81 | 1.42 | 7376 | 901 | 1 | 0 | 15 | 0 | 0 | logfile |
✔ | 7FiJ | 31599 | 2024-03-10 | 2021-07-31 | 3.8 | 2.32 | — | 1.8 | 0.001 | 0.41 | 0.0 | 0.04 | 8.02 | 0.00 | 2.344 | 3.95 | 0.00 | 4.1 | 95.9 | 0.0 | 1.10 | 0.58 | 0.50 | 3.05 | 1.3 | 0.006 | 0.86 | 0.0 | 0.05 | 12.15 | 0.00 | 2.164 | 13.33 | 11.25 | 16.5 | 83.5 | 0.0 | -1.70 | 0.74 | 0.62 | 0.56 | 2.72 | 3061 | 561 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DEP | 27394 | 2024-03-10 | 2022-06-21 | 3.6 | 4.01 | 3.65 | 3.8 | 0.008 | 0.76 | 0.0 | 0.07 | 19.70 | 0.01 | 2.197 | 5.44 | 0.65 | 0.5 | 99.5 | 0.0 | 3.03 | 0.47 | 0.78 | 1.93 | 3.9 | 0.003 | 0.63 | 0.0 | 0.03 | 13.06 | 0.00 | 2.178 | 8.00 | 1.29 | 2.0 | 98.0 | 0.0 | 2.52 | 0.66 | 0.46 | 0.78 | 1.76 | 3223 | 398 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 6ZPG | 11338 | 2024-03-10 | 2020-07-08 | 4.6 | 4.29 | — | 7.0 | 0.004 | 0.99 | 0.0 | 0.05 | 15.64 | 0.01 | 2.313 | 5.51 | 0.25 | 5.6 | 94.4 | 0.0 | -3.85 | 0.60 | 0.55 | — | 7.0 | 0.003 | 0.86 | 0.0 | 0.05 | 15.23 | 0.00 | 2.219 | 17.45 | 0.00 | 6.1 | 93.9 | 0.0 | 0.31 | 2.22 | 0.65 | 0.63 | — | 3808 | 463 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8P52 | 17440 | 2024-03-19 | 2023-05-23 | 3.6 | 3.64 | — | 3.4 | 0.002 | 0.63 | 0.0 | 0.04 | 13.73 | 0.01 | 2.166 | 3.44 | 0.00 | 5.6 | 94.4 | 0.0 | -2.19 | 0.78 | 0.55 | 1.88 | 3.4 | 0.003 | 0.65 | 0.0 | 0.04 | 15.43 | 0.00 | 2.103 | 8.92 | 1.62 | 4.2 | 95.8 | 0.0 | 0.20 | 1.53 | 0.85 | 0.74 | 1.39 | 22783 | 2914 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TX6 | 26155 | 2024-03-10 | 2022-02-07 | 3.3 | 3.60 | 3.29 | 3.5 | 0.008 | 0.90 | 1.0 | 0.05 | 17.01 | 0.01 | 2.327 | 6.69 | 0.62 | 3.0 | 97.0 | 0.0 | 2.51 | 0.53 | 0.76 | 2.79 | 3.5 | 0.003 | 0.74 | 0.0 | 0.05 | 14.86 | 0.01 | 2.349 | 6.37 | 1.88 | 3.0 | 97.0 | 0.0 | 1.74 | 1.60 | 0.54 | 0.78 | 2.34 | 3169 | 398 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7TX7 | 26156 | 2024-03-10 | 2022-02-07 | 3.8 | 4.02 | 3.76 | 3.9 | 0.008 | 0.76 | 0.0 | 0.07 | 21.15 | 0.00 | 2.072 | 6.28 | 0.00 | 1.8 | 98.2 | 0.0 | 3.77 | 0.44 | 0.74 | 1.59 | 3.9 | 0.003 | 0.75 | 0.0 | 0.04 | 13.51 | 0.00 | 2.235 | 9.02 | 2.61 | 2.0 | 98.0 | 0.0 | 2.33 | 1.33 | 0.47 | 0.75 | 1.83 | 3203 | 397 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 7K1V | 22630 | 2024-03-10 | 2020-09-08 | 4.6 | 4.95 | — | 4.8 | 0.008 | 1.12 | 0.0 | 0.06 | 15.77 | 0.01 | 2.159 | 13.77 | 0.40 | 11.0 | 89.0 | 0.0 | -4.04 | 0.71 | 0.71 | — | 4.7 | 0.004 | 0.76 | 0.0 | 0.05 | 14.29 | 0.01 | 2.112 | 31.24 | 0.20 | 9.1 | 90.9 | 0.0 | -1.60 | 1.45 | 0.72 | 0.77 | — | 4971 | 626 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8C03 | 16354 | 2024-03-10 | 2022-12-15 | 3.89 | 4.09 | 3.71 | 4.1 | 0.007 | 0.86 | 0.0 | 0.04 | 12.87 | 0.00 | 1.232 | 8.74 | 3.06 | 2.8 | 97.2 | 0.0 | 2.75 | 0.56 | 0.76 | 1.69 | 4.1 | 0.003 | 0.67 | 0.0 | 0.04 | 16.22 | 0.00 | 2.173 | 14.66 | 3.06 | 1.9 | 98.1 | 0.0 | 2.48 | 1.49 | 0.56 | 0.78 | 1.07 | 3330 | 429 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7W7U | 32348 | 2024-03-11 | 2021-12-06 | 3.0 | 2.54 | 2.92 | 2.9 | 0.003 | 0.56 | 0.0 | 0.04 | 12.54 | 0.00 | 1.966 | 7.56 | 0.00 | 2.6 | 97.4 | 0.0 | 0.77 | 0.59 | 0.77 | 1.85 | 3.0 | 0.002 | 0.50 | 0.0 | 0.04 | 16.16 | 0.00 | 2.070 | 7.94 | 1.39 | 2.8 | 97.2 | 0.0 | 0.60 | 1.30 | 0.59 | 0.79 | 1.47 | 7833 | 1015 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 8i7N | 35223 | 2024-03-11 | 2023-02-01 | 2.98 | 3.12 | 2.92 | 3.0 | 0.006 | 0.66 | 0.0 | 0.04 | 23.30 | 0.00 | 1.982 | 2.00 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.82 | 0.83 | — | 3.0 | 0.008 | 0.74 | 0.0 | 0.04 | 23.13 | 0.01 | 1.929 | 5.26 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.95 | 0.87 | 0.91 | — | 8979 | 0 | 1 | 418 | 29 | 0 | 0 | logfile |
✔ | 6UET | 20756 | 2024-03-10 | 2019-09-23 | 4.1 | 4.91 | — | 5.1 | 0.010 | 1.61 | 0.0 | 0.07 | 26.22 | 0.02 | 1.977 | 4.88 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.62 | 0.73 | — | 5.0 | 0.007 | 0.95 | 0.0 | 0.05 | 27.75 | 0.01 | 1.730 | 49.85 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.76 | 0.66 | 0.80 | — | 3869 | 0 | 1 | 119 | 1 | 0 | 1291 | logfile |
✔ | 8iWE | 35765 | 2024-03-10 | 2023-03-29 | 3.4 | 3.95 | 3.24 | 3.8 | 0.004 | 0.93 | 1.0 | 0.07 | 16.00 | 0.00 | 2.321 | 10.10 | 2.84 | 5.9 | 94.1 | 0.0 | -0.50 | 0.58 | 0.79 | 2.37 | 3.8 | 0.002 | 0.59 | 0.0 | 0.04 | 15.57 | 0.00 | 2.180 | 4.59 | 1.90 | 5.2 | 94.8 | 0.0 | 0.40 | 1.01 | 0.63 | 0.86 | 1.79 | 2236 | 296 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 6UES | 20755 | 2024-03-10 | 2019-09-23 | 3.7 | 3.94 | — | 3.2 | 0.002 | 0.48 | 0.0 | 0.02 | 26.31 | 0.00 | 2.100 | 7.29 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.87 | 0.76 | — | 3.3 | 0.007 | 0.89 | 0.0 | 0.04 | 27.66 | 0.01 | 1.797 | 37.47 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.86 | 0.88 | 0.83 | — | 3842 | 0 | 1 | 119 | 0 | 0 | 1291 | logfile |
✔ | 5LY6 | 4118 | 2024-03-10 | 2016-09-24 | 4.5 | 4.72 | — | 4.3 | 0.006 | 1.24 | 0.0 | 0.03 | 24.28 | 0.02 | 1.526 | 94.62 | 36.32 | 20.9 | 74.2 | 4.9 | -5.32 | 0.34 | 0.59 | — | 4.4 | 0.004 | 0.81 | 0.0 | 0.04 | 13.90 | 0.00 | 2.192 | 16.63 | 0.00 | 10.2 | 89.3 | 0.4 | -2.86 | 2.17 | 0.40 | 0.77 | — | 3725 | 471 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8iWM | 35771 | 2024-03-10 | 2023-03-30 | 3.17 | 3.65 | 2.80 | 3.5 | 0.004 | 0.76 | 0.0 | 0.04 | 14.98 | 0.00 | 2.390 | 9.55 | 5.26 | 3.4 | 96.6 | 0.0 | -2.66 | 0.56 | 0.76 | 2.24 | 3.5 | 0.003 | 0.61 | 0.0 | 0.04 | 15.59 | 0.00 | 2.217 | 9.03 | 5.26 | 2.6 | 97.4 | 0.0 | 0.05 | 1.18 | 0.59 | 0.78 | 1.89 | 1980 | 271 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7W7T | 32347 | 2024-03-11 | 2021-12-06 | 3.4 | 2.93 | 3.31 | 3.4 | 0.003 | 0.63 | 0.0 | 0.04 | 13.40 | 0.00 | 2.069 | 10.32 | 0.11 | 2.9 | 97.1 | 0.0 | 0.71 | 0.57 | 0.70 | 1.45 | 3.4 | 0.002 | 0.56 | 0.0 | 0.04 | 15.42 | 0.00 | 2.071 | 8.99 | 1.60 | 3.1 | 96.9 | 0.0 | 0.10 | 1.33 | 0.58 | 0.71 | 0.91 | 7903 | 1021 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 6XLY | 22252 | 2024-03-10 | 2020-06-29 | 3.1 | 4.00 | 3.11 | 3.5 | 0.006 | 0.95 | 0.0 | 0.05 | 15.47 | 0.01 | 2.336 | 4.00 | 0.97 | 4.3 | 95.7 | 0.0 | -5.77 | 0.86 | 0.77 | 1.71 | 3.6 | 0.003 | 0.61 | 0.0 | 0.04 | 15.59 | 0.00 | 2.160 | 11.59 | 1.56 | 3.0 | 97.0 | 0.0 | 0.51 | 0.57 | 0.88 | 0.84 | 1.47 | 5111 | 646 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 8HRU | 34980 | 2024-03-10 | 2022-12-16 | 3.9 | 4.26 | 4.10 | 4.1 | 0.006 | 0.98 | 0.0 | 0.05 | 17.40 | 0.01 | 2.000 | 22.29 | 0.38 | 3.9 | 96.1 | 0.0 | -1.28 | 0.75 | 0.69 | 0.45 | 4.1 | 0.003 | 0.76 | 0.0 | 0.05 | 18.02 | 0.00 | 2.081 | 20.18 | 2.47 | 4.9 | 95.1 | 0.0 | -0.13 | 0.64 | 0.75 | 0.70 | 0.49 | 4870 | 597 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 5M5H | 4155 | 2024-03-10 | 2016-10-21 | 4.5 | 2.29 | — | 2.2 | 0.007 | 1.50 | 0.0 | 0.08 | 12.37 | 0.01 | 2.186 | 39.89 | 0.00 | 8.7 | 88.9 | 2.4 | -5.94 | 0.14 | 0.14 | — | 2.1 | 0.003 | 0.85 | 0.0 | 0.05 | 12.37 | 0.01 | 2.369 | 17.88 | 0.00 | 7.9 | 92.1 | 0.0 | -0.80 | 1.84 | 0.15 | 0.14 | — | 1086 | 132 | 1 | 0 | 0 | 0 | 0 | logfile |