The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7X7M | 33041 | 2024-03-15 | 2022-03-09 | 2.33 | 2.38 | 2.34 | 2.3 | 0.007 | 0.72 | 13.0 | 0.05 | 17.99 | 0.01 | 2.256 | 4.82 | 2.56 | 2.6 | 97.4 | 0.0 | 2.72 | 0.78 | 0.86 | 3.51 | 2.3 | 0.007 | 0.77 | 47.0 | 0.06 | 18.49 | 0.01 | 2.176 | 4.68 | 3.49 | 2.7 | 97.3 | 0.0 | 1.79 | 0.50 | 0.80 | 0.88 | 3.56 | 70620 | 9240 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WR2 | 21875 | 2024-03-24 | 2020-04-29 | 2.88 | 3.14 | — | 3.1 | 0.014 | 0.88 | 0.0 | 0.06 | 12.47 | 0.01 | 2.203 | 4.10 | 0.00 | 0.1 | 99.9 | 0.0 | -0.06 | 0.51 | 0.72 | 2.95 | 3.1 | 0.004 | 0.56 | 0.0 | 0.04 | 17.08 | 0.00 | 1.927 | 6.42 | 1.78 | 2.4 | 97.6 | 0.0 | 1.07 | 1.57 | 0.69 | 0.88 | 4.06 | 42671 | 2729 | 34 | 0 | 0 | 14 | 21361 | logfile |
✔ | 8CVZ | 27022 | 2024-03-19 | 2022-05-18 | 3.52 | 3.83 | 3.62 | 3.9 | 0.008 | 1.57 | 40.0 | 0.13 | 14.87 | 0.01 | 2.118 | 11.00 | 5.85 | 3.0 | 96.9 | 0.1 | -0.25 | 0.70 | 0.78 | 1.78 | 3.8 | 0.004 | 0.67 | 0.0 | 0.04 | 16.42 | 0.00 | 2.064 | 13.96 | 2.85 | 3.8 | 96.2 | 0.0 | 0.48 | 1.25 | 0.69 | 0.75 | 1.47 | 24517 | 3070 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZXJ | 11522 | 2024-03-23 | 2020-07-29 | 3.5 | 3.86 | — | 3.8 | 0.016 | 1.31 | 3.0 | 0.07 | 12.15 | 0.01 | 2.048 | 18.83 | 0.26 | 8.3 | 91.1 | 0.6 | -3.10 | 0.69 | 0.79 | 2.28 | 3.7 | 0.005 | 0.79 | 0.0 | 0.05 | 14.68 | 0.00 | 2.037 | 12.31 | 2.84 | 4.3 | 95.7 | 0.0 | -0.21 | 0.59 | 0.67 | 0.77 | 1.95 | 38244 | 5099 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M7J | 23715 | 2024-03-19 | 2021-03-28 | 4.3 | 5.19 | — | 4.4 | 0.005 | 0.93 | 1.0 | 0.06 | 15.47 | 0.01 | 2.117 | 19.19 | 5.04 | 6.4 | 93.5 | 0.1 | -2.14 | 0.84 | 0.71 | — | 4.4 | 0.003 | 0.70 | 0.0 | 0.04 | 13.67 | 0.00 | 1.987 | 25.63 | 0.00 | 6.1 | 93.9 | 0.0 | -1.36 | 1.25 | 0.86 | 0.77 | — | 23224 | 3124 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CXQ | 27067 | 2024-03-11 | 2022-05-22 | 2.3 | 3.31 | 2.77 | 3.1 | 0.002 | 0.46 | 0.0 | 0.04 | 10.31 | 0.00 | 2.008 | 5.61 | 0.22 | 3.9 | 96.0 | 0.1 | 0.30 | 0.78 | 0.80 | 2.66 | 3.1 | 0.005 | 0.55 | 0.0 | 0.04 | 12.05 | 0.00 | 1.888 | 7.09 | 0.82 | 5.1 | 94.9 | 0.0 | -0.20 | 0.38 | 0.73 | 0.76 | 2.60 | 56384 | 3666 | 6 | 0 | 0 | 0 | 27792 | logfile |
✔ | 8EUE | 28612 | 2024-03-15 | 2022-10-18 | 3.48 | 4.06 | 3.85 | 3.7 | 0.007 | 1.33 | 0.0 | 0.06 | 31.23 | 0.01 | 2.242 | 6.41 | 0.00 | 3.8 | 96.2 | 0.0 | -2.48 | 0.78 | 0.80 | 0.90 | 3.7 | 0.004 | 0.94 | 0.0 | 0.04 | 30.09 | 0.00 | 2.066 | 19.79 | 5.39 | 4.1 | 95.9 | 0.0 | 0.81 | 0.44 | 0.78 | 0.80 | 0.44 | 11926 | 751 | 10 | 294 | 0 | 0 | 0 | logfile |
✔ | 7AS9 | 11890 | 2024-03-19 | 2020-10-27 | 3.5 | 4.52 | 3.51 | 4.2 | 0.007 | 0.98 | 0.0 | 0.05 | 24.57 | 0.01 | 1.976 | 8.25 | 0.07 | 13.0 | 86.6 | 0.4 | -4.86 | 0.92 | 0.83 | 0.18 | 4.2 | 0.004 | 0.75 | 0.0 | 0.04 | 24.64 | 0.01 | 2.041 | 30.77 | 5.50 | 11.3 | 88.6 | 0.1 | -2.62 | 0.71 | 0.92 | 0.84 | 0.28 | 93137 | 3720 | 32 | 2999 | 0 | 0 | 0 | logfile |
✔ | 8CYD | 27075 | 2024-03-20 | 2022-05-23 | 2.6 | 3.24 | 2.62 | 3.0 | 0.002 | 0.51 | 0.0 | 0.04 | 12.52 | 0.01 | 1.930 | 6.47 | 0.32 | 4.9 | 94.7 | 0.4 | 0.04 | 0.77 | 0.79 | 2.24 | 3.0 | 0.006 | 0.63 | 0.0 | 0.05 | 14.40 | 0.00 | 2.084 | 8.57 | 1.52 | 5.4 | 94.4 | 0.2 | -0.11 | 1.16 | 0.80 | 0.84 | 2.49 | 28454 | 3663 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CYC | 27074 | 2024-03-20 | 2022-05-23 | 2.9 | 3.44 | 2.92 | 3.2 | 0.002 | 0.53 | 0.0 | 0.04 | 13.71 | 0.00 | 2.186 | 8.20 | 0.16 | 5.4 | 94.3 | 0.3 | -0.06 | 0.74 | 0.71 | 1.18 | 3.2 | 0.007 | 0.75 | 0.0 | 0.05 | 15.58 | 0.00 | 2.079 | 16.06 | 2.61 | 7.9 | 91.9 | 0.2 | -0.98 | 0.51 | 0.76 | 0.77 | 1.83 | 28697 | 3677 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UiG | 26545 | 2024-03-20 | 2022-03-29 | 4.3 | 8.24 | 4.32 | 3.9 | 0.005 | 0.80 | 0.0 | 0.05 | 12.88 | 0.01 | 0.850 | 11.11 | 0.09 | 1.3 | 98.5 | 0.1 | 1.54 | 0.45 | 0.44 | — | 3.9 | 0.010 | 0.70 | 0.0 | 0.04 | 12.89 | 0.00 | 2.117 | 17.22 | 0.00 | 2.6 | 97.4 | 0.0 | 1.41 | 0.75 | 0.58 | 0.78 | — | 27580 | 3390 | 17 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LUC | 23520 | 2024-03-22 | 2021-02-22 | 3.21 | 2.30 | 3.37 | 2.1 | 0.004 | 0.73 | 0.0 | 0.05 | 15.74 | 0.01 | 1.937 | 16.21 | 3.51 | 3.5 | 96.5 | 0.0 | -1.82 | 0.66 | 0.61 | 1.85 | 2.1 | 0.003 | 0.67 | 0.0 | 0.04 | 16.80 | 0.00 | 2.067 | 14.70 | 4.42 | 4.9 | 95.1 | 0.0 | -0.09 | 0.48 | 0.71 | 0.70 | 1.46 | 21288 | 2754 | 15 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VF5 | 31947 | 2024-03-15 | 2021-09-10 | 3.0 | 3.69 | — | 3.6 | 0.003 | 0.64 | 0.0 | 0.04 | 14.39 | 0.00 | 2.182 | 8.35 | 0.00 | 2.8 | 97.2 | 0.0 | 0.56 | 0.68 | 0.77 | 1.64 | 3.6 | 0.004 | 0.66 | 0.0 | 0.04 | 16.68 | 0.00 | 2.185 | 9.40 | 2.20 | 3.0 | 97.0 | 0.0 | 1.24 | 0.91 | 0.65 | 0.78 | 1.51 | 12313 | 1556 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FDG | 29011 | 2024-03-15 | 2022-12-03 | 3.2 | 3.62 | — | 3.5 | 0.003 | 0.68 | 0.0 | 0.05 | 14.00 | 0.01 | 2.166 | 10.24 | 0.00 | 11.9 | 88.1 | 0.0 | -2.81 | 0.72 | 0.77 | 2.13 | 3.5 | 0.004 | 0.75 | 0.0 | 0.05 | 16.02 | 0.01 | 2.153 | 11.08 | 2.67 | 13.2 | 86.8 | 0.1 | -3.15 | 0.41 | 0.73 | 0.79 | 2.12 | 12163 | 1505 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7YHS | 33837 | 2024-03-19 | 2022-07-14 | 3.37 | 2.19 | 3.33 | 1.9 | 0.005 | 0.91 | 0.0 | 0.05 | 20.46 | 0.01 | 2.129 | 6.19 | 7.08 | 8.0 | 92.0 | 0.1 | -4.27 | 0.70 | 0.65 | 1.63 | 1.9 | 0.004 | 0.76 | 2.0 | 0.04 | 20.49 | 0.00 | 2.100 | 11.45 | 5.61 | 8.4 | 91.6 | 0.0 | -1.38 | 0.40 | 0.72 | 0.68 | 1.15 | 24596 | 2949 | 13 | 109 | 0 | 0 | 0 | logfile |
✔ | 7SZ7 | 25563 | 2024-03-15 | 2021-11-25 | 3.4 | 4.38 | — | 3.7 | 0.005 | 0.79 | 0.0 | 0.05 | 14.43 | 0.00 | 1.707 | 9.79 | 1.81 | 11.0 | 88.6 | 0.4 | -4.49 | 0.86 | 0.78 | 2.38 | 3.7 | 0.003 | 0.65 | 0.0 | 0.04 | 15.18 | 0.00 | 2.226 | 9.94 | 1.81 | 8.7 | 91.2 | 0.1 | -2.07 | 0.55 | 0.92 | 0.88 | 2.27 | 10218 | 1328 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CRB | 30449 | 2024-03-11 | 2020-08-13 | 3.16 | 3.51 | — | 3.4 | 0.005 | 0.81 | 2.0 | 0.05 | 13.84 | 0.00 | 2.288 | 8.58 | 0.77 | 8.8 | 91.2 | 0.0 | -2.29 | 0.75 | 0.82 | 3.00 | 3.4 | 0.003 | 0.60 | 0.0 | 0.04 | 15.68 | 0.00 | 2.262 | 8.94 | 3.07 | 6.6 | 93.4 | 0.0 | -1.04 | 1.15 | 0.71 | 0.81 | 2.48 | 6806 | 851 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6EBM | 9026 | 2024-03-11 | 2018-08-06 | 4.0 | 4.06 | — | 3.9 | 0.012 | 1.10 | 0.0 | 0.06 | 9.31 | 0.01 | 2.049 | 5.25 | 0.00 | 5.4 | 94.6 | 0.0 | -4.86 | 0.66 | 0.79 | — | 3.8 | 0.003 | 0.90 | 0.0 | 0.05 | 14.61 | 0.00 | 2.193 | 13.56 | 4.53 | 4.9 | 95.1 | 0.0 | 0.69 | 0.96 | 0.66 | 0.80 | — | 8532 | 1192 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7AQD | 11864 | 2024-03-19 | 2020-10-21 | 3.1 | 3.48 | — | 3.2 | 0.005 | 1.09 | 11.0 | 0.05 | 23.95 | 0.01 | 0.152 | 6.41 | 1.12 | 5.2 | 94.5 | 0.3 | -2.11 | 0.78 | 0.72 | 1.63 | 3.2 | 0.009 | 0.76 | 0.0 | 0.04 | 24.09 | 0.01 | 1.850 | 15.65 | 4.02 | 7.4 | 92.5 | 0.1 | -1.30 | 2.50 | 0.90 | 0.90 | 1.90 | 94357 | 3543 | 32 | 3106 | 0 | 0 | 0 | logfile |
✔ | 6R70 | 4738 | 2024-03-25 | 2019-03-28 | 3.5 | 3.64 | — | 3.6 | 0.008 | 1.07 | 3.0 | 0.06 | 12.89 | 0.01 | 2.135 | 4.78 | 0.52 | 3.7 | 96.1 | 0.3 | -2.76 | 0.79 | 0.79 | 2.26 | 3.6 | 0.003 | 0.71 | 0.0 | 0.04 | 15.56 | 0.00 | 2.100 | 11.75 | 2.71 | 3.8 | 96.1 | 0.0 | 0.18 | 1.28 | 0.79 | 0.79 | 1.93 | 48581 | 6211 | 28 | 0 | 0 | 0 | 0 | logfile |