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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7JZ6 | 22530 | 2024-03-18 | 2020-09-01 | 2.53 | 2.20 | — | 2.2 | 0.009 | 1.04 | 8.0 | 0.11 | 19.13 | 0.01 | 1.219 | 8.05 | 11.17 | 7.8 | 92.2 | 0.0 | -3.03 | 0.58 | 0.65 | 2.78 | 2.2 | 0.003 | 0.76 | 1.0 | 0.04 | 18.66 | 0.00 | 2.175 | 6.02 | 3.69 | 2.9 | 97.1 | 0.0 | 0.34 | 1.59 | 0.57 | 0.66 | 2.46 | 20842 | 2646 | 12 | 0 | 4 | 18 | 0 | logfile |
✔ | 6PA7 | 20281 | 2024-03-18 | 2019-06-11 | 2.94 | 3.31 | — | 3.1 | 0.005 | 0.80 | 0.0 | 0.05 | 23.62 | 0.01 | 2.304 | 3.72 | 0.00 | 3.1 | 96.9 | 0.0 | -2.99 | 0.80 | 0.77 | 2.57 | 3.1 | 0.004 | 0.68 | 0.0 | 0.04 | 25.76 | 0.00 | 2.105 | 12.09 | 2.93 | 3.9 | 96.1 | 0.0 | 0.55 | 0.86 | 0.82 | 0.83 | 2.91 | 21019 | 1770 | 19 | 332 | 3 | 0 | 0 | logfile |
✔ | 6V6B | 21067 | 2024-03-14 | 2019-12-04 | 3.8 | 3.96 | — | 3.9 | 0.005 | 0.55 | 0.0 | 0.04 | 14.36 | 0.00 | 2.211 | 5.33 | 0.00 | 5.1 | 94.9 | 0.0 | -5.29 | 0.54 | 0.84 | 1.85 | 3.9 | 0.002 | 0.58 | 0.0 | 0.04 | 16.91 | 0.00 | 2.219 | 6.21 | 3.00 | 3.0 | 97.0 | 0.0 | -0.36 | 0.50 | 0.53 | 0.83 | 0.78 | 9115 | 1111 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Z2G | 14465 | 2024-03-11 | 2022-02-26 | 3.65 | 3.52 | 3.63 | 3.6 | 0.007 | 0.73 | 1.0 | 0.05 | 17.09 | 0.02 | 2.324 | 8.07 | 0.24 | 3.9 | 96.1 | 0.0 | -0.62 | 0.63 | 0.76 | 2.35 | 3.6 | 0.004 | 0.72 | 0.0 | 0.04 | 18.56 | 0.01 | 2.189 | 9.22 | 2.89 | 4.2 | 95.8 | 0.0 | -0.70 | 0.39 | 0.63 | 0.76 | 2.25 | 8406 | 943 | 4 | 36 | 1 | 0 | 0 | logfile |
✔ | 7LD3 | 23280 | 2024-03-11 | 2021-01-12 | 3.2 | 3.49 | 3.04 | 3.5 | 0.006 | 1.02 | 0.0 | 0.06 | 12.92 | 0.01 | 2.277 | 3.63 | 0.13 | 3.3 | 96.7 | 0.0 | -1.50 | 0.59 | 0.82 | 3.41 | 3.4 | 0.003 | 0.56 | 0.0 | 0.04 | 14.43 | 0.00 | 2.152 | 8.18 | 2.38 | 2.6 | 97.4 | 0.0 | 0.55 | 1.26 | 0.69 | 0.87 | 2.63 | 7016 | 888 | 5 | 0 | 2 | 1 | 0 | logfile |
✔ | 6MHW | 9120 | 2024-03-22 | 2018-09-18 | 4.0 | 4.10 | 3.97 | 4.0 | 0.004 | 0.62 | 0.0 | 0.13 | 7.02 | 0.00 | 1.933 | 7.04 | 0.00 | 3.4 | 96.6 | 0.0 | -2.09 | 0.79 | 0.77 | — | 4.0 | 0.003 | 0.66 | 0.0 | 0.12 | 12.97 | 0.00 | 1.915 | 10.28 | 0.94 | 4.7 | 95.3 | 0.0 | 1.78 | 1.49 | 0.79 | 0.79 | — | 34414 | 2452 | 4 | 0 | 0 | 0 | 16514 | logfile |
✔ | 6PLX | 20379 | 2024-03-16 | 2019-07-01 | 2.9 | 3.61 | — | 3.5 | 0.011 | 1.13 | 0.0 | 0.06 | 13.13 | 0.01 | 2.316 | 6.04 | 0.00 | 3.2 | 96.8 | 0.0 | -5.10 | 0.56 | 0.83 | 4.25 | 3.5 | 0.003 | 0.66 | 0.0 | 0.04 | 14.59 | 0.00 | 2.154 | 9.58 | 2.90 | 3.0 | 97.0 | 0.0 | -1.19 | 1.33 | 0.47 | 0.74 | 3.42 | 14240 | 1730 | 15 | 0 | 20 | 0 | 0 | logfile |
✔ | 7MJP | 23881 | 2024-03-16 | 2021-04-20 | 4.2 | 4.40 | — | 4.3 | 0.008 | 1.11 | 0.0 | 0.07 | 10.54 | 0.01 | 1.477 | 2.76 | 0.00 | 9.1 | 90.9 | 0.0 | -1.16 | 0.51 | 0.65 | — | 4.4 | 0.002 | 0.62 | 0.0 | 0.05 | 8.27 | 0.00 | 2.278 | 0.82 | 0.00 | 8.1 | 91.9 | 0.0 | -0.47 | 0.45 | 0.56 | 0.70 | — | 14163 | 2818 | 10 | 0 | 8 | 0 | 0 | logfile |
✔ | 7P15 | 13156 | 2024-03-11 | 2021-07-01 | 3.58 | 3.46 | 3.56 | 3.5 | 0.007 | 0.93 | 2.0 | 0.07 | 16.44 | 0.02 | 2.182 | 8.93 | 0.23 | 4.0 | 96.0 | 0.0 | -1.15 | 0.62 | 0.71 | 2.09 | 3.5 | 0.003 | 0.72 | 0.0 | 0.04 | 18.10 | 0.01 | 2.182 | 10.95 | 1.87 | 2.9 | 97.1 | 0.0 | -0.27 | 0.42 | 0.62 | 0.71 | 2.29 | 8587 | 969 | 3 | 34 | 1 | 0 | 0 | logfile |
✔ | 7P1G | 13158 | 2024-03-20 | 2021-07-01 | 3.2 | 3.39 | — | 3.3 | 0.022 | 1.36 | 10.0 | 0.08 | 15.09 | 0.01 | 1.310 | 9.08 | 0.17 | 6.0 | 94.0 | 0.0 | -2.89 | 0.65 | 0.80 | 3.22 | 3.3 | 0.003 | 0.69 | 0.0 | 0.04 | 16.22 | 0.00 | 1.976 | 10.71 | 1.61 | 2.9 | 97.1 | 0.0 | -0.01 | 1.76 | 0.65 | 0.83 | 2.23 | 28580 | 3620 | 25 | 5 | 25 | 0 | 0 | logfile |
✔ | 7S8C | 24893 | 2024-03-18 | 2021-09-17 | 2.85 | 2.35 | — | 2.5 | 0.010 | 1.19 | 0.0 | 0.06 | 14.48 | 0.01 | 2.221 | 6.51 | 0.75 | 3.0 | 97.0 | 0.0 | -4.72 | 0.76 | 0.82 | 4.13 | 2.5 | 0.003 | 0.65 | 0.0 | 0.04 | 16.99 | 0.00 | 2.210 | 10.68 | 3.25 | 2.4 | 97.6 | 0.0 | 1.09 | 0.63 | 0.77 | 0.83 | 2.52 | 20562 | 2448 | 8 | 0 | 34 | 0 | 0 | logfile |
✔ | 8DBD | 27280 | 2024-03-20 | 2022-06-14 | 3.2 | 3.20 | 3.28 | 3.2 | 0.007 | 0.77 | 0.0 | 0.06 | 15.09 | 0.00 | 2.119 | 5.93 | 2.74 | 3.3 | 96.7 | 0.0 | 0.45 | 0.65 | 0.77 | 3.28 | 3.2 | 0.003 | 0.52 | 0.0 | 0.05 | 16.30 | 0.00 | 2.089 | 7.64 | 2.61 | 4.0 | 96.0 | 0.0 | 0.94 | 1.29 | 0.66 | 0.85 | 3.07 | 28464 | 3708 | 24 | 0 | 24 | 0 | 0 | logfile |
✔ | 6NP0 | 0469 | 2024-03-17 | 2019-01-17 | 2.92 | 3.16 | 3.01 | 3.1 | 0.011 | 1.29 | 0.0 | 0.08 | 13.91 | 0.01 | 2.270 | 3.63 | 0.55 | 5.2 | 94.8 | 0.0 | -3.90 | 0.69 | 0.72 | 2.76 | 3.1 | 0.004 | 0.68 | 0.0 | 0.05 | 13.93 | 0.00 | 2.198 | 5.70 | 3.23 | 3.1 | 96.9 | 0.0 | 0.30 | 0.81 | 0.79 | 0.85 | 2.88 | 16891 | 1975 | 20 | 0 | 41 | 0 | 0 | logfile |
✔ | 7RUA | 24701 | 2024-03-15 | 2021-08-16 | 3.4 | 3.27 | 3.30 | 3.3 | 0.003 | 0.57 | 0.0 | 0.04 | 14.91 | 0.01 | 1.920 | 7.52 | 0.00 | 2.2 | 97.8 | 0.0 | 1.77 | 0.65 | 0.76 | 2.85 | 3.3 | 0.004 | 0.57 | 0.0 | 0.04 | 16.88 | 0.01 | 2.085 | 9.64 | 3.21 | 2.2 | 97.8 | 0.0 | 1.57 | 1.28 | 0.75 | 0.85 | 2.78 | 11603 | 1448 | 10 | 0 | 5 | 0 | 0 | logfile |
✔ | 7MR2 | 23954 | 2024-03-17 | 2021-05-07 | 4.3 | 4.72 | — | 4.5 | 0.003 | 0.75 | 0.0 | 0.05 | 14.96 | 0.01 | 2.257 | 5.77 | 0.00 | 5.1 | 94.9 | 0.0 | -1.32 | 0.90 | 0.84 | — | 4.5 | 0.002 | 0.55 | 0.0 | 0.04 | 14.95 | 0.00 | 2.178 | 9.67 | 0.06 | 4.6 | 95.4 | 0.0 | 0.26 | 0.30 | 0.90 | 0.84 | — | 16671 | 2075 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6KS8 | 0760 | 2024-03-12 | 2019-08-23 | 4.69 | 4.76 | — | 4.6 | 0.001 | 0.39 | 0.0 | 0.04 | 7.12 | 0.00 | 2.228 | 5.86 | 0.01 | 4.4 | 95.5 | 0.0 | -3.61 | 0.77 | 0.67 | — | 4.6 | 0.003 | 0.69 | 0.0 | 0.04 | 11.58 | 0.00 | 2.091 | 17.25 | 0.01 | 3.7 | 96.3 | 0.0 | -0.05 | 1.87 | 0.81 | 0.72 | — | 61943 | 8120 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ELM | 31185 | 2024-03-25 | 2021-04-12 | 2.88 | 3.11 | — | 2.9 | 0.005 | 0.78 | 0.0 | 0.05 | 17.11 | 0.01 | 1.839 | 6.41 | 0.40 | 6.1 | 93.9 | 0.0 | -3.08 | 0.85 | 0.82 | 2.81 | 2.9 | 0.004 | 0.60 | 0.0 | 0.04 | 17.75 | 0.00 | 2.091 | 9.17 | 1.80 | 6.3 | 93.7 | 0.0 | 0.00 | 0.45 | 0.87 | 0.87 | 2.50 | 47399 | 6201 | 22 | 120 | 0 | 0 | 0 | logfile |
✔ | 7DDE | 30652 | 2024-03-25 | 2020-10-28 | 2.26 | 3.31 | — | 3.0 | 0.009 | 1.14 | 10.0 | 0.07 | 14.34 | 0.01 | 2.042 | 8.48 | 1.16 | 5.0 | 94.9 | 0.0 | -2.84 | 0.71 | 0.85 | 3.66 | 3.0 | 0.003 | 0.63 | 0.0 | 0.04 | 15.93 | 0.00 | 1.978 | 13.04 | 1.07 | 6.0 | 94.0 | 0.0 | -0.26 | 1.17 | 0.69 | 0.85 | 3.21 | 51171 | 6300 | 36 | 0 | 48 | 1911 | 0 | logfile |
✔ | 6TFJ | 10492 | 2024-03-25 | 2019-11-14 | 2.9 | 3.01 | 2.90 | 3.0 | 0.002 | 0.43 | 0.0 | 0.04 | 9.89 | 0.00 | 2.013 | 6.81 | 0.11 | 8.4 | 91.6 | 0.0 | -2.53 | 0.70 | 0.73 | 2.51 | 3.0 | 0.003 | 0.55 | 0.0 | 0.04 | 14.93 | 0.00 | 1.950 | 9.66 | 1.46 | 6.9 | 93.0 | 0.1 | -0.81 | 1.33 | 0.70 | 0.76 | 2.13 | 48340 | 3058 | 4 | 0 | 0 | 0 | 24098 | logfile |
✔ | 6ZGJ | 11208 | 2024-03-15 | 2020-06-18 | 3.4 | 3.39 | 3.34 | 3.5 | 0.005 | 0.61 | 0.0 | 0.04 | 12.36 | 0.00 | 2.192 | 9.66 | 0.00 | 6.3 | 93.7 | 0.0 | -1.35 | 0.69 | 0.79 | 3.10 | 3.5 | 0.004 | 0.61 | 0.0 | 0.04 | 14.41 | 0.00 | 2.213 | 7.04 | 2.65 | 6.0 | 94.0 | 0.0 | -0.87 | 0.42 | 0.71 | 0.85 | 2.58 | 11555 | 1540 | 5 | 0 | 0 | 0 | 0 | logfile |