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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7WUQ | 32838 | 2024-03-16 | 2022-02-09 | 2.9 | 3.09 | — | 3.1 | 0.006 | 1.06 | 1.0 | 0.07 | 14.17 | 0.01 | 2.204 | 23.10 | 0.47 | 5.0 | 95.0 | 0.0 | -3.00 | 0.58 | 0.72 | 2.29 | 3.1 | 0.004 | 0.67 | 0.0 | 0.04 | 16.36 | 0.00 | 2.109 | 20.84 | 3.03 | 5.2 | 94.8 | 0.0 | -0.56 | 0.62 | 0.57 | 0.77 | 2.52 | 7973 | 1009 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7S66 | 24851 | 2024-03-19 | 2021-09-13 | 2.8 | 3.06 | 2.88 | 3.1 | 0.013 | 1.34 | 0.0 | 0.06 | 12.06 | 0.01 | 1.770 | 2.28 | 0.00 | 1.4 | 98.6 | 0.0 | 0.50 | 0.75 | 0.83 | 3.82 | 3.0 | 0.004 | 0.55 | 0.0 | 0.04 | 16.61 | 0.00 | 1.822 | 5.70 | 2.53 | 1.7 | 98.3 | 0.0 | 0.78 | 1.36 | 0.73 | 0.85 | 3.58 | 23242 | 2910 | 12 | 0 | 24 | 0 | 0 | logfile |
✔ | 7TNZ | 26024 | 2024-03-10 | 2022-01-22 | 3.54 | 3.70 | — | 3.7 | 0.011 | 1.17 | 0.0 | 0.07 | 15.33 | 0.00 | 2.258 | 8.16 | 0.66 | 6.8 | 92.8 | 0.4 | -2.66 | 0.71 | 0.81 | 2.02 | 3.7 | 0.004 | 1.03 | 1.0 | 0.04 | 17.41 | 0.00 | 2.228 | 11.98 | 3.78 | 7.1 | 92.9 | 0.0 | -0.52 | 1.19 | 0.71 | 0.80 | 1.48 | 5986 | 680 | 4 | 23 | 2 | 0 | 0 | logfile |
✔ | 7JSZ | 22464 | 2024-03-24 | 2020-08-16 | 3.7 | 4.30 | 3.93 | 4.0 | 0.005 | 0.96 | 2.0 | 0.08 | 22.12 | 0.01 | 2.227 | 11.91 | 0.88 | 11.0 | 87.0 | 2.0 | -5.09 | 0.86 | 0.85 | 1.01 | 4.0 | 0.004 | 0.72 | 0.0 | 0.04 | 23.31 | 0.01 | 1.964 | 24.94 | 5.97 | 10.6 | 89.2 | 0.2 | -2.50 | 1.09 | 0.87 | 0.86 | 0.79 | 147860 | 6144 | 57 | 4655 | 0 | 0 | 0 | logfile |
✔ | 7E9C | 31029 | 2024-03-19 | 2021-03-04 | 3.5 | 4.28 | 3.62 | 4.0 | 0.003 | 0.58 | 0.0 | 0.03 | 26.94 | 0.00 | 2.221 | 12.74 | 0.14 | 3.3 | 96.7 | 0.0 | 0.16 | 0.78 | 0.69 | 0.28 | 4.0 | 0.003 | 0.62 | 0.0 | 0.04 | 28.05 | 0.00 | 2.148 | 16.12 | 3.32 | 4.2 | 95.8 | 0.0 | 0.21 | 1.60 | 0.82 | 0.78 | 0.57 | 12338 | 898 | 11 | 260 | 0 | 0 | 0 | logfile |
✔ | 8DAV | 27277 | 2024-03-22 | 2022-06-14 | 3.5 | 4.03 | 3.95 | 3.9 | 0.004 | 0.96 | 10.0 | 0.19 | 11.63 | 0.00 | 1.312 | 9.62 | 0.79 | 5.1 | 94.8 | 0.0 | 1.53 | 0.82 | 0.79 | 1.37 | 3.9 | 0.003 | 0.65 | 0.0 | 0.04 | 14.44 | 0.00 | 2.133 | 9.14 | 1.60 | 4.4 | 95.6 | 0.0 | 1.19 | 0.72 | 0.83 | 0.80 | 0.98 | 34248 | 4342 | 18 | 0 | 14 | 0 | 0 | logfile |
✔ | 7W2Z | 32268 | 2024-03-14 | 2021-11-24 | 2.8 | 3.01 | — | 3.0 | 0.009 | 1.13 | 1.0 | 0.06 | 14.81 | 0.01 | 2.078 | 8.01 | 0.82 | 3.6 | 96.3 | 0.1 | -4.01 | 0.60 | 0.80 | 4.19 | 3.0 | 0.003 | 0.61 | 0.0 | 0.04 | 16.05 | 0.00 | 2.123 | 6.08 | 2.14 | 3.3 | 96.7 | 0.0 | -0.05 | 0.51 | 0.57 | 0.80 | 3.18 | 9080 | 1154 | 7 | 0 | 3 | 0 | 0 | logfile |
✔ | 6VXF | 21436 | 2024-03-11 | 2020-02-21 | 3.5 | 3.42 | — | 3.4 | 0.009 | 1.04 | 0.0 | 0.06 | 15.36 | 0.01 | 2.255 | 4.68 | 1.25 | 7.7 | 92.1 | 0.2 | -4.65 | 0.63 | 0.81 | 2.40 | 3.4 | 0.004 | 0.65 | 0.0 | 0.04 | 16.64 | 0.00 | 2.221 | 11.17 | 2.60 | 6.5 | 93.4 | 0.2 | -0.36 | 1.24 | 0.63 | 0.81 | 2.24 | 8786 | 1130 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6BM0 | 7114 | 2024-03-15 | 2017-11-12 | 3.8 | 3.87 | — | 3.9 | 0.007 | 1.09 | 3.0 | 0.07 | 10.66 | 0.01 | 1.978 | 19.11 | 2.83 | 8.9 | 90.1 | 0.9 | -3.90 | 0.77 | 0.77 | 2.59 | 3.9 | 0.003 | 0.73 | 0.0 | 0.05 | 14.98 | 0.00 | 2.143 | 14.48 | 2.61 | 7.3 | 92.5 | 0.3 | -1.68 | 1.41 | 0.79 | 0.85 | 2.39 | 12244 | 1538 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KNU | 22963 | 2024-03-10 | 2020-11-06 | 3.49 | 4.38 | 3.61 | 4.1 | 0.003 | 0.64 | 0.0 | 0.04 | 14.11 | 0.01 | 2.141 | 9.25 | 0.00 | 4.0 | 96.0 | 0.0 | -1.59 | 0.59 | 0.76 | 1.17 | 4.1 | 0.003 | 0.69 | 0.0 | 0.04 | 16.24 | 0.00 | 2.212 | 10.70 | 1.69 | 3.8 | 96.2 | 0.0 | -0.30 | 0.59 | 0.59 | 0.76 | 0.37 | 3809 | 467 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WSM | 32760 | 2024-03-10 | 2022-01-30 | 3.25 | 3.65 | — | 3.6 | 0.006 | 0.84 | 0.0 | 0.04 | 17.30 | 0.01 | 2.253 | 11.36 | 0.81 | 6.5 | 93.5 | 0.0 | -1.23 | 0.62 | 0.82 | 1.57 | 3.6 | 0.003 | 0.62 | 0.0 | 0.04 | 16.74 | 0.01 | 2.181 | 8.35 | 2.96 | 3.7 | 96.3 | 0.0 | 0.82 | 0.50 | 0.62 | 0.83 | 1.25 | 3577 | 464 | 3 | 0 | 3 | 0 | 0 | logfile |
✔ | 6LFo | 0879 | 2024-03-15 | 2019-12-03 | 3.4 | 3.79 | — | 3.9 | 0.013 | 1.13 | 0.0 | 0.06 | 15.00 | 0.01 | 2.255 | 7.17 | 0.29 | 7.2 | 92.8 | 0.0 | -5.54 | 0.61 | 0.80 | 2.31 | 3.9 | 0.003 | 0.71 | 0.0 | 0.04 | 17.01 | 0.00 | 2.172 | 13.14 | 3.89 | 4.6 | 95.4 | 0.0 | -1.78 | 0.70 | 0.62 | 0.81 | 1.61 | 9573 | 1228 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 7Y5G | 33619 | 2024-03-10 | 2022-06-17 | 3.85 | 4.19 | 3.81 | 4.2 | 0.002 | 0.43 | 0.0 | 0.04 | 12.74 | 0.00 | 2.084 | 2.19 | 0.00 | 0.7 | 99.3 | 0.0 | -0.05 | 0.63 | 0.72 | 1.21 | 4.1 | 0.002 | 0.51 | 0.0 | 0.04 | 15.53 | 0.00 | 2.012 | 5.62 | 2.45 | 1.0 | 99.0 | 0.0 | 1.56 | 0.67 | 0.65 | 0.75 | 0.12 | 4736 | 604 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 7SSP | 25412 | 2024-03-16 | 2021-11-11 | 3.5 | 3.32 | 3.41 | 3.7 | 0.004 | 0.63 | 0.0 | 0.04 | 14.58 | 0.00 | 2.232 | 4.57 | 0.00 | 6.8 | 93.2 | 0.0 | -3.24 | 0.71 | 0.80 | 1.40 | 3.6 | 0.003 | 0.64 | 0.0 | 0.04 | 16.53 | 0.00 | 2.221 | 4.89 | 1.48 | 5.9 | 94.1 | 0.0 | 2.15 | 1.78 | 0.72 | 0.82 | 1.70 | 10930 | 1376 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7V8L | 31803 | 2024-03-14 | 2021-08-23 | 3.5 | 3.83 | — | 3.8 | 0.006 | 0.79 | 1.0 | 0.05 | 15.39 | 0.01 | 2.198 | 11.42 | 1.03 | 3.2 | 96.6 | 0.2 | -0.03 | 0.58 | 0.62 | 0.51 | 3.8 | 0.003 | 0.69 | 0.0 | 0.04 | 17.17 | 0.00 | 2.114 | 9.90 | 3.08 | 2.9 | 97.1 | 0.0 | 0.74 | 0.80 | 0.61 | 0.72 | 0.99 | 9505 | 1277 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 5iRX | 8117 | 2024-03-16 | 2016-03-14 | 2.95 | 3.39 | 2.91 | 3.3 | 0.014 | 1.44 | 0.0 | 0.07 | 19.90 | 0.01 | 1.744 | 9.65 | 0.00 | 10.7 | 89.2 | 0.1 | -6.45 | 0.67 | 0.77 | 3.80 | 3.4 | 0.003 | 0.67 | 0.0 | 0.04 | 15.96 | 0.00 | 2.246 | 7.53 | 1.92 | 8.3 | 91.7 | 0.0 | -0.49 | 0.68 | 0.62 | 0.82 | 2.17 | 13162 | 1726 | 12 | 0 | 20 | 0 | 0 | logfile |
✔ | 7BXT | 30237 | 2024-03-16 | 2020-04-20 | 4.2 | 4.32 | 4.13 | 4.2 | 0.010 | 0.94 | 0.0 | 0.05 | 28.65 | 0.01 | 1.659 | 17.10 | 0.39 | 6.4 | 93.6 | 0.0 | -4.26 | 0.84 | 0.85 | — | 4.2 | 0.003 | 0.67 | 0.0 | 0.04 | 27.17 | 0.00 | 2.123 | 13.56 | 0.10 | 5.3 | 94.7 | 0.0 | -0.32 | 1.67 | 0.84 | 0.84 | — | 15696 | 1201 | 14 | 290 | 0 | 0 | 0 | logfile |
✔ | 7BV1 | 30209 | 2024-03-11 | 2020-04-09 | 2.8 | 2.97 | — | 3.0 | 0.005 | 0.82 | 0.0 | 0.06 | 15.13 | 0.00 | 2.266 | 6.96 | 0.00 | 4.3 | 95.7 | 0.0 | -1.91 | 0.62 | 0.75 | 2.16 | 3.0 | 0.003 | 0.59 | 0.0 | 0.04 | 17.17 | 0.00 | 2.194 | 7.37 | 2.80 | 4.1 | 95.9 | 0.0 | -0.55 | 1.42 | 0.64 | 0.82 | 2.49 | 8799 | 1112 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 8ERP | 28557 | 2024-03-10 | 2022-10-12 | 3.7 | 3.96 | 3.35 | 4.0 | 0.004 | 0.86 | 0.0 | 0.04 | 19.42 | 0.01 | 2.016 | 7.49 | 0.00 | 5.8 | 94.2 | 0.0 | 0.16 | 0.66 | 0.80 | 2.15 | 4.0 | 0.003 | 0.70 | 0.0 | 0.04 | 16.89 | 0.01 | 1.993 | 5.96 | 2.86 | 6.9 | 93.1 | 0.0 | 0.96 | 0.46 | 0.68 | 0.81 | 1.88 | 6056 | 728 | 4 | 0 | 26 | 0 | 0 | logfile |
✔ | 7T6D | 25713 | 2024-03-11 | 2021-12-13 | 3.9 | 4.12 | 3.81 | 4.1 | 0.006 | 0.84 | 2.0 | 0.05 | 13.51 | 0.02 | 2.172 | 12.57 | 1.42 | 2.9 | 97.0 | 0.1 | 1.14 | 0.54 | 0.61 | 0.72 | 4.1 | 0.005 | 0.69 | 0.0 | 0.04 | 15.16 | 0.00 | 2.156 | 9.02 | 2.36 | 2.5 | 97.5 | 0.0 | 2.31 | 0.69 | 0.62 | 0.71 | 0.72 | 7566 | 1181 | 6 | 0 | 2 | 0 | 0 | logfile |