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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5LiJ | 4054 | 2024-04-04 | 2016-07-14 | 4.2 | 3.63 | — | 4.2 | 0.009 | 2.92 | 4.0 | 0.17 | 15.82 | 0.01 | 2.249 | 25.64 | 0.00 | 10.7 | 89.3 | 0.0 | -6.36 | 0.85 | 0.76 | — | 3.8 | 0.005 | 1.17 | 0.0 | 0.04 | 10.44 | 0.00 | 2.149 | 15.78 | 0.00 | 35.3 | 64.7 | 0.0 | -5.53 | 1.48 | 0.86 | 0.78 | — | 761 | 152 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HN4 | 0246 | 2024-04-05 | 2018-09-14 | 4.2 | 4.43 | — | 4.1 | 0.007 | 1.50 | 2.0 | 0.07 | 9.90 | 0.01 | 2.187 | 6.18 | 0.00 | 6.9 | 91.4 | 1.8 | -2.18 | 0.73 | 0.70 | — | 4.2 | 0.004 | 0.73 | 0.0 | 0.05 | 11.53 | 0.00 | 2.107 | 14.42 | 0.00 | 8.0 | 92.0 | 0.0 | 0.11 | 1.13 | 0.76 | 0.78 | — | 5702 | 700 | 2 | 0 | 6 | 0 | 0 | logfile |
✔ | 7QES | 13939 | 2024-04-05 | 2021-12-03 | 2.6 | 3.37 | — | 3.0 | 0.006 | 0.86 | 0.0 | 0.04 | 13.93 | 0.00 | 2.122 | 3.25 | 0.00 | 3.9 | 96.1 | 0.0 | -0.99 | 0.77 | 0.86 | 3.39 | 3.0 | 0.003 | 0.59 | 0.0 | 0.04 | 15.37 | 0.00 | 2.169 | 4.06 | 1.52 | 3.1 | 96.9 | 0.0 | 2.58 | 1.22 | 0.78 | 0.87 | 2.82 | 3076 | 366 | 6 | 0 | 10 | 14 | 0 | logfile |
✔ | 6WKT | 21708 | 2024-04-05 | 2020-04-16 | 3.4 | 3.21 | 3.09 | 3.3 | 0.004 | 0.81 | 0.0 | 0.05 | 13.97 | 0.01 | 2.329 | 0.00 | 0.00 | 1.9 | 98.1 | 0.0 | -3.42 | 0.65 | 0.75 | 3.69 | 3.3 | 0.002 | 0.55 | 0.0 | 0.03 | 16.09 | 0.00 | 2.218 | 9.65 | 0.00 | 3.8 | 96.2 | 0.0 | 4.32 | 1.34 | 0.63 | 0.74 | 3.16 | 3152 | 424 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZZ1 | 15031 | 2024-04-05 | 2022-05-25 | 2.27 | 2.59 | 2.22 | 2.1 | 0.007 | 0.89 | 0.0 | 0.05 | 18.25 | 0.01 | 2.159 | 3.90 | 2.68 | 2.6 | 97.4 | 0.0 | -1.05 | 0.91 | 0.90 | 4.22 | 2.1 | 0.003 | 0.62 | 0.0 | 0.04 | 17.77 | 0.00 | 2.108 | 8.41 | 3.07 | 2.6 | 97.4 | 0.0 | 1.01 | 1.10 | 0.91 | 0.90 | 4.01 | 4958 | 618 | 5 | 0 | 4 | 55 | 0 | logfile |
✔ | 6J6J | 0689 | 2024-04-05 | 2019-01-15 | 3.2 | 3.36 | — | 3.4 | 0.011 | 1.06 | 0.0 | 0.06 | 13.51 | 0.01 | 2.291 | 6.43 | 0.00 | 11.1 | 88.9 | 0.0 | -3.36 | 0.54 | 0.69 | 4.31 | 3.4 | 0.004 | 0.69 | 0.0 | 0.04 | 14.85 | 0.00 | 2.223 | 12.72 | 7.56 | 7.1 | 92.9 | 0.0 | -2.50 | 1.32 | 0.69 | 0.81 | 3.58 | 3624 | 476 | 12 | 0 | 4 | 12 | 0 | logfile |
✔ | 7US9 | 26729 | 2024-04-05 | 2022-04-23 | 3.8 | 3.84 | 3.64 | 3.9 | 0.015 | 1.58 | 0.0 | 0.11 | 7.49 | 0.01 | 2.489 | 3.45 | 0.00 | 2.3 | 97.7 | 0.0 | 1.07 | 0.59 | 0.74 | 4.43 | 3.8 | 0.003 | 0.78 | 0.0 | 0.11 | 11.81 | 0.01 | 2.146 | 5.42 | 1.23 | 1.6 | 98.4 | 0.0 | 0.51 | 1.45 | 0.60 | 0.77 | 2.97 | 1127 | 145 | 3 | 0 | 4 | 0 | 0 | logfile |
✔ | 7CAH | 30331 | 2024-04-05 | 2020-06-08 | 3.9 | 4.13 | — | 4.0 | 0.005 | 0.92 | 0.0 | 0.05 | 13.68 | 0.01 | 2.137 | 18.79 | 0.00 | 19.9 | 79.8 | 0.3 | -5.76 | 0.68 | 0.64 | 2.37 | 4.0 | 0.004 | 0.80 | 0.0 | 0.05 | 15.23 | 0.01 | 2.149 | 18.04 | 4.44 | 16.7 | 83.3 | 0.0 | -3.89 | 0.46 | 0.70 | 0.64 | 2.01 | 2889 | 404 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SK0 | 25168 | 2024-04-05 | 2021-10-19 | 3.33 | 3.63 | 2.74 | 3.6 | 0.009 | 1.04 | 0.0 | 0.06 | 14.22 | 0.01 | 2.005 | 3.11 | 0.44 | 4.3 | 95.7 | 0.0 | 0.35 | 0.47 | 0.66 | 1.21 | 3.6 | 0.004 | 0.71 | 0.0 | 0.04 | 16.06 | 0.00 | 2.173 | 12.07 | 1.55 | 2.4 | 97.6 | 0.0 | 2.29 | 0.56 | 0.48 | 0.68 | 1.84 | 4168 | 514 | 4 | 0 | 7 | 0 | 0 | logfile |
✔ | 8QSM | 18636 | 2024-04-05 | 2023-10-10 | 3.69 | 4.23 | 3.52 | 4.0 | 0.002 | 0.48 | 0.0 | 0.03 | 10.37 | 0.00 | 2.269 | 4.15 | 3.75 | 3.5 | 96.5 | 0.0 | 2.22 | 0.55 | 0.76 | 0.70 | 4.0 | 0.003 | 0.87 | 0.0 | 0.04 | 15.54 | 0.00 | 2.035 | 14.93 | 3.49 | 3.5 | 96.5 | 0.0 | 1.79 | 1.46 | 0.56 | 0.78 | 1.37 | 3579 | 464 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CZ6 | 30507 | 2024-04-05 | 2020-09-07 | 4.1 | 4.04 | — | 4.1 | 0.009 | 1.62 | 0.0 | 0.05 | 8.57 | 0.01 | 1.047 | 61.25 | 0.00 | 8.1 | 91.9 | 0.0 | -1.66 | 0.68 | 0.64 | — | 4.1 | 0.005 | 0.85 | 0.0 | 0.05 | 10.75 | 0.01 | 2.091 | 14.92 | 0.00 | 6.6 | 93.4 | 0.0 | -2.16 | 0.90 | 0.66 | 0.74 | — | 4535 | 630 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CTJ | 26992 | 2024-04-05 | 2022-05-15 | 4.74 | 4.27 | 4.78 | 5.3 | 0.005 | 0.92 | 0.0 | 0.05 | 14.67 | 0.01 | 2.233 | 6.13 | 0.00 | 4.6 | 95.4 | 0.0 | -0.72 | 0.43 | 0.48 | — | 4.2 | 0.003 | 0.73 | 0.0 | 0.04 | 14.72 | 0.00 | 2.098 | 15.69 | 0.00 | 5.8 | 94.2 | 0.0 | 0.16 | 1.85 | 0.50 | 0.59 | — | 3312 | 401 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7QEU | 13941 | 2024-04-05 | 2021-12-03 | 2.7 | 3.39 | — | 3.0 | 0.007 | 0.80 | 0.0 | 0.04 | 13.54 | 0.00 | 2.135 | 3.49 | 0.00 | 2.6 | 97.4 | 0.0 | 0.76 | 0.78 | 0.87 | 3.01 | 3.0 | 0.002 | 0.54 | 0.0 | 0.04 | 14.86 | 0.00 | 2.195 | 4.16 | 0.93 | 2.0 | 98.0 | 0.0 | 3.41 | 0.42 | 0.79 | 0.88 | 2.64 | 3002 | 359 | 6 | 0 | 6 | 7 | 0 | logfile |
✔ | 7ZZ0 | 15030 | 2024-04-05 | 2022-05-25 | 2.26 | 2.63 | 2.22 | 2.1 | 0.004 | 0.71 | 0.0 | 0.05 | 16.82 | 0.00 | 2.149 | 3.28 | 1.96 | 1.9 | 98.1 | 0.0 | -0.34 | 0.92 | 0.91 | 4.41 | 2.1 | 0.003 | 0.51 | 0.0 | 0.04 | 16.65 | 0.00 | 2.110 | 4.91 | 2.18 | 1.5 | 98.5 | 0.0 | 1.22 | 0.19 | 0.92 | 0.91 | 4.73 | 4387 | 541 | 1 | 0 | 2 | 84 | 0 | logfile |
✔ | 7Vo9 | 32049 | 2024-04-05 | 2021-10-13 | 3.8 | 3.98 | 3.82 | 3.8 | 0.011 | 1.58 | 1.0 | 0.09 | 23.20 | 0.00 | 2.124 | 6.40 | 0.76 | 0.8 | 99.2 | 0.0 | 2.89 | 0.75 | 0.63 | 0.88 | 3.9 | 0.004 | 0.68 | 0.0 | 0.04 | 27.11 | 0.00 | 1.950 | 18.06 | 6.82 | 0.8 | 99.2 | 0.0 | 1.08 | 1.14 | 0.77 | 0.67 | 0.54 | 5711 | 524 | 10 | 86 | 12 | 0 | 0 | logfile |
✔ | 6J6K | 0690 | 2024-04-05 | 2019-01-15 | 3.3 | 3.61 | — | 3.8 | 0.005 | 1.22 | 0.0 | 0.06 | 12.69 | 0.00 | 2.357 | 5.53 | 1.16 | 6.8 | 90.6 | 2.6 | -4.75 | 0.75 | 0.81 | 5.62 | 3.8 | 0.005 | 0.80 | 0.0 | 0.04 | 14.00 | 0.00 | 2.203 | 12.81 | 4.07 | 7.3 | 91.9 | 0.9 | -2.03 | 0.59 | 0.68 | 0.79 | 4.69 | 3548 | 476 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7BW8 | 30230 | 2024-04-05 | 2020-04-14 | 3.8 | 4.16 | 3.79 | 4.4 | 0.009 | 1.38 | 0.0 | 0.07 | 17.39 | 0.01 | 1.974 | 49.64 | 0.00 | 22.3 | 77.7 | 0.0 | -5.01 | 0.70 | 0.66 | 0.41 | 4.4 | 0.003 | 0.89 | 0.0 | 0.05 | 18.29 | 0.01 | 2.172 | 21.49 | 4.42 | 12.4 | 87.5 | 0.1 | -3.01 | 1.54 | 0.68 | 0.63 | 0.60 | 6021 | 737 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QEo | 13935 | 2024-04-05 | 2021-12-03 | 2.9 | 3.47 | — | 3.1 | 0.007 | 0.78 | 0.0 | 0.04 | 13.54 | 0.00 | 2.106 | 5.39 | 0.00 | 3.9 | 96.1 | 0.0 | 0.61 | 0.78 | 0.88 | 3.13 | 3.1 | 0.003 | 0.64 | 0.0 | 0.04 | 15.55 | 0.00 | 2.175 | 6.20 | 1.21 | 2.5 | 97.5 | 0.0 | 2.76 | 1.18 | 0.78 | 0.88 | 2.90 | 3056 | 368 | 6 | 0 | 6 | 4 | 0 | logfile |
✔ | 6VAB | 21135 | 2024-04-05 | 2019-12-17 | 4.9 | 6.51 | — | 6.8 | 0.005 | 0.91 | 0.0 | 0.06 | 8.70 | 0.01 | 2.264 | 14.98 | 0.00 | 6.8 | 93.2 | 0.0 | -3.84 | 0.71 | 0.69 | — | 6.6 | 0.004 | 0.69 | 0.0 | 0.04 | 4.96 | 0.00 | 2.132 | 7.42 | 0.00 | 8.6 | 91.4 | 0.0 | -0.31 | 2.71 | 0.73 | 0.69 | — | 4642 | 938 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WU0 | 21901 | 2024-04-05 | 2020-05-04 | 3.59 | 3.92 | — | 3.9 | 0.003 | 0.65 | 0.0 | 0.04 | 13.43 | 0.00 | 2.211 | 10.57 | 0.00 | 6.0 | 94.0 | 0.0 | -1.89 | 0.56 | 0.63 | 0.78 | 3.9 | 0.004 | 0.78 | 0.0 | 0.04 | 15.68 | 0.01 | 2.164 | 12.80 | 3.20 | 7.6 | 92.4 | 0.0 | 0.14 | 0.50 | 0.54 | 0.64 | 0.62 | 6340 | 854 | 1 | 0 | 0 | 0 | 0 | logfile |