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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8F8P | 28932 | 2024-04-08 | 2022-11-22 | 2.26 | 2.19 | 2.27 | 1.9 | 0.004 | 0.83 | 0.0 | 0.05 | 17.73 | 0.01 | 2.301 | 2.96 | 2.04 | 2.7 | 97.3 | 0.0 | -1.31 | 0.72 | 0.85 | 2.89 | 1.8 | 0.006 | 0.65 | 0.0 | 0.05 | 17.08 | 0.00 | 2.015 | 6.43 | 2.49 | 3.7 | 96.3 | 0.0 | 0.05 | 1.16 | 0.74 | 0.88 | 3.79 | 14640 | 1855 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 8BL4 | 16101 | 2024-04-14 | 2022-11-09 | 3.9 | 3.96 | 3.83 | 3.9 | 0.018 | 1.88 | 5.0 | 0.10 | 10.49 | 0.01 | 1.199 | 10.85 | 0.45 | 5.9 | 93.3 | 0.8 | -1.43 | 0.58 | 0.67 | 0.61 | 3.9 | 0.004 | 0.85 | 0.0 | 0.05 | 16.20 | 0.01 | 2.039 | 15.37 | 4.24 | 10.1 | 89.7 | 0.2 | -1.97 | 1.79 | 0.62 | 0.73 | 0.93 | 96456 | 12480 | 48 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RX5 | 24725 | 2024-04-06 | 2021-08-21 | 3.4 | 3.65 | — | 3.6 | 0.002 | 0.25 | 0.0 | 0.03 | 11.98 | 0.00 | 2.288 | 5.05 | 0.00 | 0.0 | 100.0 | 0.0 | 4.54 | 0.70 | 0.85 | 3.58 | 3.6 | 0.002 | 0.33 | 0.0 | 0.03 | 13.43 | 0.00 | 2.264 | 5.87 | 0.00 | 0.0 | 100.0 | 0.0 | 5.24 | 0.23 | 0.71 | 0.87 | 2.92 | 9120 | 1160 | 40 | 0 | 0 | 0 | 0 | logfile |
✔ | 5JXL | 8179 | 2024-04-10 | 2016-05-13 | 3.5 | 3.48 | — | 3.6 | 0.008 | 1.39 | 0.0 | 0.06 | 9.65 | 0.00 | 1.795 | 18.18 | 0.15 | 8.7 | 89.0 | 2.2 | -2.06 | 0.30 | 0.77 | 1.70 | 3.5 | 0.004 | 0.79 | 0.0 | 0.05 | 15.97 | 0.00 | 2.116 | 13.37 | 5.70 | 7.6 | 92.1 | 0.4 | -1.65 | 1.50 | 0.30 | 0.83 | 2.03 | 69993 | 9361 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QKU | 14053 | 2024-04-05 | 2021-12-19 | 2.57 | 2.42 | 2.48 | 2.7 | 0.011 | 1.83 | 5.0 | 0.10 | 11.69 | 0.01 | 2.516 | 0.28 | 0.00 | 5.2 | 94.8 | 0.0 | -1.72 | 0.47 | 0.88 | 5.27 | 2.7 | 0.004 | 1.30 | 1.0 | 0.05 | 17.77 | 0.00 | 2.344 | 4.97 | 1.52 | 2.7 | 97.3 | 0.0 | -2.05 | 1.57 | 0.46 | 0.91 | 5.37 | 3456 | 453 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QKL | 14046 | 2024-04-05 | 2021-12-17 | 2.07 | 2.04 | 1.98 | 2.0 | 0.011 | 2.37 | 0.0 | 0.25 | 12.79 | 0.01 | 2.537 | 0.14 | 0.00 | 3.6 | 96.4 | 0.0 | -1.75 | 0.40 | 0.83 | 7.75 | 2.0 | 0.006 | 0.71 | 0.0 | 0.05 | 17.27 | 0.01 | 2.435 | 3.96 | 0.76 | 2.7 | 97.3 | 0.0 | -1.28 | 1.99 | 0.45 | 0.91 | 8.47 | 3468 | 456 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7R4T | 14316 | 2024-04-06 | 2022-02-09 | 2.75 | 2.72 | 2.62 | 2.8 | 0.011 | 1.77 | 0.0 | 0.09 | 11.86 | 0.01 | 2.520 | 0.00 | 0.00 | 3.8 | 96.2 | 0.0 | -2.02 | 0.42 | 0.84 | 4.94 | 2.8 | 0.003 | 0.52 | 0.0 | 0.05 | 15.75 | 0.00 | 2.401 | 1.41 | 1.01 | 2.7 | 97.3 | 0.0 | -1.28 | 1.57 | 0.42 | 0.89 | 6.20 | 7074 | 456 | 6 | 0 | 0 | 0 | 3606 | logfile |
✔ | 6XYQ | 10652 | 2024-04-05 | 2020-01-30 | 3.09 | 3.30 | 2.79 | 3.3 | 0.007 | 0.71 | 0.0 | 0.05 | 12.97 | 0.00 | 2.130 | 9.08 | 0.00 | 3.5 | 96.5 | 0.0 | -4.52 | 0.46 | 0.84 | 3.97 | 3.4 | 0.005 | 0.53 | 0.0 | 0.05 | 15.48 | 0.00 | 2.236 | 8.09 | 4.29 | 2.3 | 97.7 | 0.0 | -3.43 | 0.36 | 0.46 | 0.84 | 4.80 | 4955 | 725 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZiR | 14738 | 2024-04-05 | 2022-04-08 | 2.5 | 2.51 | 2.04 | 2.7 | 0.002 | 0.34 | 0.0 | 0.03 | 9.02 | 0.00 | 2.317 | 1.65 | 0.00 | 2.0 | 98.0 | 0.0 | -3.82 | 0.48 | 0.90 | 7.46 | 2.7 | 0.003 | 0.46 | 0.0 | 0.04 | 12.13 | 0.00 | 2.312 | 0.55 | 0.00 | 3.7 | 96.3 | 0.0 | -3.81 | 1.03 | 0.51 | 0.93 | 7.87 | 2120 | 255 | 10 | 0 | 0 | 50 | 0 | logfile |
✔ | 8EEV | 28060 | 2024-04-10 | 2022-09-07 | 3.6 | 2.41 | 3.45 | 2.0 | 0.009 | 0.95 | 0.0 | 0.05 | 9.16 | 0.01 | 1.996 | 4.75 | 0.00 | 11.6 | 88.1 | 0.3 | -4.66 | 0.70 | 0.73 | 3.35 | 2.1 | 0.004 | 0.79 | 0.0 | 0.05 | 14.45 | 0.00 | 2.125 | 12.46 | 4.78 | 8.4 | 91.5 | 0.1 | -1.99 | 0.61 | 0.71 | 0.75 | 3.00 | 20640 | 2713 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZJ2 | 14739 | 2024-04-05 | 2022-04-08 | 3.32 | 3.56 | — | 3.6 | 0.014 | 2.21 | 0.0 | 0.08 | 15.29 | 0.01 | 2.548 | 0.00 | 0.00 | 2.3 | 97.7 | 0.0 | -3.75 | 0.47 | 0.78 | 4.64 | 3.6 | 0.007 | 0.75 | 0.0 | 0.03 | 16.74 | 0.00 | 2.133 | 17.07 | 8.91 | 3.9 | 96.1 | 0.0 | -3.48 | 1.43 | 0.43 | 0.76 | 4.95 | 3792 | 540 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RiB | 4887 | 2024-04-09 | 2019-04-23 | 4.2 | 3.32 | — | 4.0 | 0.008 | 1.12 | 0.0 | 0.06 | 18.48 | 0.00 | 0.563 | 15.47 | 9.09 | 10.1 | 89.9 | 0.0 | -5.68 | 0.73 | 0.66 | — | 3.9 | 0.006 | 0.93 | 0.0 | 0.05 | 14.12 | 0.00 | 2.058 | 24.63 | 0.00 | 19.7 | 80.3 | 0.0 | -5.81 | 1.54 | 0.77 | 0.74 | — | 16368 | 2222 | 22 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UAK | 26427 | 2024-04-05 | 2022-03-13 | 3.38 | 3.45 | 2.13 | 3.6 | 0.003 | 0.70 | 0.0 | 0.05 | 13.75 | 0.00 | 2.407 | 13.48 | 0.00 | 14.4 | 85.6 | 0.0 | -2.82 | 0.31 | 0.67 | 2.41 | 3.6 | 0.004 | 0.71 | 0.0 | 0.05 | 17.15 | 0.00 | 2.293 | 6.45 | 4.92 | 19.2 | 80.8 | 0.0 | -3.49 | 0.62 | 0.36 | 0.76 | 1.84 | 2586 | 372 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6TJX | 10514 | 2024-04-05 | 2019-11-27 | 3.0 | 3.21 | 2.52 | 3.4 | 0.011 | 1.10 | 0.0 | 0.07 | 9.93 | 0.01 | 2.312 | 4.11 | 0.00 | 4.8 | 95.2 | 0.0 | -3.93 | 0.43 | 0.79 | 4.74 | 3.3 | 0.006 | 0.82 | 0.0 | 0.06 | 14.65 | 0.00 | 2.265 | 7.81 | 4.26 | 6.5 | 93.5 | 0.0 | -3.42 | 2.44 | 0.43 | 0.84 | 3.98 | 4878 | 642 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Ro6 | 24589 | 2024-04-12 | 2021-07-30 | 4.1 | 4.30 | — | 3.8 | 0.006 | 0.69 | 0.0 | 0.04 | 12.71 | 0.01 | 2.220 | 13.37 | 1.33 | 5.4 | 94.6 | 0.0 | 1.57 | 0.68 | 0.86 | — | 3.8 | 0.003 | 0.72 | 0.0 | 0.05 | 11.87 | 0.01 | 2.208 | 11.17 | 0.00 | 3.4 | 96.6 | 0.0 | 2.99 | 0.57 | 0.68 | 0.84 | — | 137200 | 18800 | 200 | 0 | 0 | 0 | 0 | logfile |
✔ | 6BQW | 7134 | 2024-04-10 | 2017-11-28 | 4.2 | 4.44 | — | 4.3 | 0.016 | 1.28 | 0.0 | 0.07 | 13.92 | 0.01 | 2.307 | 8.25 | 0.00 | 10.3 | 83.9 | 5.9 | -3.51 | 0.73 | 0.68 | — | 4.3 | 0.012 | 0.82 | 0.0 | 0.05 | 15.14 | 0.01 | 1.871 | 27.30 | 0.00 | 14.2 | 84.6 | 1.3 | -2.85 | 1.77 | 0.80 | 0.81 | — | 19953 | 2475 | 18 | 0 | 9 | 0 | 0 | logfile |
✔ | 7UUW | 26805 | 2024-04-12 | 2022-04-29 | 3.36 | 3.61 | 3.51 | 3.6 | 0.007 | 0.75 | 0.0 | 0.05 | 17.00 | 0.00 | 2.202 | 7.09 | 1.34 | 3.1 | 96.9 | 0.0 | -0.17 | 0.67 | 0.86 | 3.53 | 3.6 | 0.006 | 0.60 | 0.0 | 0.04 | 16.64 | 0.00 | 2.133 | 5.84 | 0.82 | 2.9 | 97.1 | 0.0 | 0.66 | 0.32 | 0.66 | 0.87 | 3.13 | 24852 | 3174 | 18 | 0 | 12 | 0 | 0 | logfile |
✔ | 8HDW | 34681 | 2024-04-06 | 2022-11-06 | 3.0 | 2.72 | 2.96 | 2.9 | 0.006 | 0.83 | 0.0 | 0.05 | 15.95 | 0.01 | 1.939 | 13.55 | 11.19 | 11.8 | 88.2 | 0.0 | -2.56 | 0.46 | 0.72 | 1.96 | 2.8 | 0.004 | 0.76 | 1.0 | 0.04 | 17.32 | 0.01 | 1.710 | 13.23 | 6.00 | 8.4 | 91.6 | 0.0 | -1.55 | 1.29 | 0.53 | 0.75 | 1.77 | 54552 | 7140 | 30 | 0 | 0 | 0 | 0 | logfile |
✔ | 8HHA | 34757 | 2024-04-12 | 2022-11-16 | 3.4 | 3.24 | 3.42 | 3.4 | 0.003 | 0.60 | 0.0 | 0.04 | 14.06 | 0.00 | 1.970 | 6.08 | 0.00 | 3.0 | 96.9 | 0.0 | 0.84 | 0.78 | 0.87 | 3.10 | 3.4 | 0.003 | 0.54 | 0.0 | 0.04 | 15.39 | 0.00 | 1.875 | 6.78 | 1.40 | 3.8 | 96.2 | 0.0 | 0.60 | 0.29 | 0.79 | 0.88 | 2.69 | 24245 | 3129 | 12 | 0 | 11 | 0 | 0 | logfile |
✔ | 6VEC | 21155 | 2024-04-05 | 2019-12-31 | 3.9 | 3.99 | — | 3.9 | 0.008 | 1.02 | 0.0 | 0.05 | 10.32 | 0.01 | 1.923 | 3.67 | 0.95 | 7.2 | 92.3 | 0.5 | -3.21 | 0.79 | 0.82 | 2.06 | 3.8 | 0.004 | 0.70 | 0.0 | 0.04 | 13.18 | 0.00 | 1.944 | 9.94 | 1.41 | 6.1 | 93.6 | 0.3 | 0.16 | 1.65 | 0.81 | 0.87 | 1.70 | 53064 | 6721 | 33 | 0 | 22 | 0 | 0 | logfile |