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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7V3P | 31671 | 2024-04-12 | 2021-08-11 | 3.6 | 3.81 | — | 3.7 | 0.008 | 1.14 | 5.0 | 0.07 | 14.31 | 0.01 | 2.011 | 12.91 | 2.27 | 7.7 | 91.3 | 1.0 | -2.21 | 0.75 | 0.67 | 1.92 | 3.7 | 0.002 | 0.61 | 0.0 | 0.05 | 14.92 | 0.00 | 2.010 | 6.72 | 0.60 | 7.2 | 92.6 | 0.2 | -1.77 | 1.26 | 0.77 | 0.71 | 2.07 | 26331 | 1674 | 6 | 0 | 4 | 0 | 12814 | logfile |
✔ | 6VCD | 21149 | 2024-04-06 | 2019-12-20 | 3.0 | 3.21 | — | 3.2 | 0.005 | 0.70 | 0.0 | 0.04 | 14.13 | 0.00 | 2.170 | 9.40 | 0.11 | 10.1 | 89.7 | 0.2 | -4.83 | 0.73 | 0.82 | 3.84 | 3.2 | 0.002 | 0.61 | 0.0 | 0.04 | 16.36 | 0.00 | 2.177 | 10.09 | 2.68 | 7.8 | 92.1 | 0.1 | -1.57 | 0.43 | 0.72 | 0.83 | 2.56 | 8082 | 1033 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 6WKN | 21705 | 2024-04-10 | 2020-04-16 | 3.46 | 3.36 | 3.47 | 3.3 | 0.007 | 0.74 | 0.0 | 0.04 | 15.69 | 0.01 | 2.264 | 6.06 | 4.53 | 4.0 | 96.0 | 0.0 | -2.93 | 0.78 | 0.81 | 2.98 | 3.3 | 0.002 | 0.53 | 0.0 | 0.04 | 16.91 | 0.00 | 2.175 | 8.21 | 3.20 | 3.2 | 96.8 | 0.0 | 1.19 | 0.61 | 0.79 | 0.83 | 2.87 | 19320 | 2424 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 6UVA | 20906 | 2024-04-07 | 2019-11-01 | 2.3 | 2.12 | 2.31 | 2.2 | 0.002 | 0.55 | 0.0 | 0.04 | 18.04 | 0.00 | 2.207 | 6.66 | 3.36 | 3.2 | 96.8 | 0.0 | -2.29 | 0.63 | 0.72 | 2.83 | 2.3 | 0.002 | 0.58 | 0.0 | 0.04 | 18.38 | 0.00 | 2.149 | 8.35 | 3.36 | 3.8 | 96.2 | 0.0 | 0.39 | 1.29 | 0.65 | 0.78 | 2.62 | 9561 | 1199 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MiM | 23856 | 2024-04-11 | 2021-04-17 | 3.42 | 3.40 | — | 3.4 | 0.010 | 1.37 | 0.0 | 0.05 | 19.54 | 0.01 | 2.327 | 3.40 | 0.00 | 5.3 | 94.6 | 0.2 | -5.95 | 0.61 | 0.79 | 3.00 | 3.4 | 0.002 | 0.55 | 0.0 | 0.04 | 16.83 | 0.00 | 2.192 | 5.45 | 0.92 | 3.9 | 96.1 | 0.0 | 0.42 | 1.24 | 0.68 | 0.86 | 1.83 | 22728 | 2560 | 8 | 0 | 40 | 0 | 0 | logfile |
✔ | 7B5R | 12048 | 2024-04-07 | 2020-12-07 | 3.8 | 4.08 | 3.77 | 3.9 | 0.006 | 0.81 | 0.0 | 0.05 | 14.43 | 0.00 | 2.001 | 16.73 | 0.00 | 9.3 | 90.7 | 0.0 | -1.41 | 0.85 | 0.81 | 1.55 | 3.9 | 0.002 | 0.62 | 0.0 | 0.04 | 15.95 | 0.00 | 2.206 | 11.00 | 1.40 | 4.8 | 95.2 | 0.0 | -0.17 | 1.20 | 0.85 | 0.80 | 1.20 | 11606 | 1430 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 8HiL | 34820 | 2024-04-11 | 2022-11-20 | 3.57 | 3.29 | 3.64 | 3.2 | 0.007 | 1.12 | 0.0 | 0.06 | 11.20 | 0.01 | 2.105 | 6.12 | 1.12 | 13.3 | 86.4 | 0.3 | -4.62 | 0.82 | 0.79 | 2.26 | 3.2 | 0.002 | 0.63 | 0.0 | 0.04 | 14.77 | 0.00 | 2.022 | 9.28 | 2.44 | 11.1 | 88.9 | 0.0 | -1.83 | 1.25 | 0.83 | 0.79 | 1.37 | 23134 | 2914 | 15 | 0 | 7 | 0 | 0 | logfile |
✔ | 7SQR | 25391 | 2024-04-09 | 2021-11-06 | 3.4 | 4.22 | 3.33 | 3.9 | 0.003 | 0.63 | 0.0 | 0.04 | 13.78 | 0.00 | 2.185 | 6.82 | 0.00 | 3.1 | 96.9 | 0.0 | 1.05 | 0.85 | 0.83 | 2.86 | 3.9 | 0.002 | 0.52 | 0.0 | 0.04 | 15.05 | 0.00 | 2.025 | 6.12 | 1.42 | 3.8 | 96.2 | 0.0 | 0.83 | 0.40 | 0.85 | 0.83 | 2.93 | 17272 | 2216 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Y5A | 33614 | 2024-04-11 | 2022-06-16 | 3.5 | 4.25 | 3.40 | 3.6 | 0.003 | 0.60 | 0.0 | 0.04 | 15.01 | 0.00 | 1.986 | 6.54 | 0.04 | 2.7 | 97.3 | 0.0 | 0.45 | 0.90 | 0.85 | 1.38 | 3.6 | 0.002 | 0.56 | 0.0 | 0.04 | 16.01 | 0.00 | 1.942 | 7.30 | 1.82 | 2.8 | 97.2 | 0.0 | 0.62 | 0.28 | 0.90 | 0.86 | 1.40 | 23975 | 3164 | 12 | 0 | 10 | 0 | 0 | logfile |
✔ | 6Y5B | 10693 | 2024-04-14 | 2020-02-25 | 3.1 | 4.45 | 2.96 | 3.0 | 0.006 | 0.87 | 0.0 | 0.05 | 13.31 | 0.01 | 2.010 | 5.44 | 0.00 | 1.9 | 98.1 | 0.0 | -3.11 | 0.93 | 0.85 | 2.13 | 3.0 | 0.002 | 0.53 | 0.0 | 0.04 | 14.13 | 0.00 | 2.106 | 6.52 | 0.74 | 1.7 | 98.3 | 0.0 | 0.46 | 1.10 | 0.94 | 0.87 | 2.41 | 31429 | 1887 | 5 | 0 | 0 | 0 | 15794 | logfile |
✔ | 7AoF | 11843 | 2024-04-14 | 2020-10-14 | 2.98 | 3.67 | — | 3.2 | 0.002 | 0.46 | 0.0 | 0.05 | 9.85 | 0.00 | 1.984 | 4.35 | 1.81 | 4.9 | 95.0 | 0.1 | 0.39 | 0.90 | 0.87 | 3.30 | 3.2 | 0.002 | 0.59 | 0.0 | 0.04 | 12.87 | 0.00 | 2.036 | 7.65 | 1.27 | 5.1 | 94.9 | 0.0 | 0.40 | 1.92 | 0.91 | 0.89 | 3.06 | 32727 | 4034 | 12 | 0 | 5 | 0 | 0 | logfile |
✔ | 6V6B | 21067 | 2024-04-06 | 2019-12-04 | 3.8 | 3.96 | — | 3.9 | 0.005 | 0.55 | 0.0 | 0.04 | 14.36 | 0.00 | 2.211 | 5.33 | 0.00 | 5.1 | 94.9 | 0.0 | -5.29 | 0.54 | 0.84 | 1.85 | 3.9 | 0.002 | 0.58 | 0.0 | 0.04 | 16.91 | 0.00 | 2.219 | 6.21 | 3.00 | 3.0 | 97.0 | 0.0 | -0.36 | 0.50 | 0.53 | 0.83 | 0.78 | 9115 | 1111 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MR2 | 23954 | 2024-04-09 | 2021-05-07 | 4.3 | 4.72 | — | 4.5 | 0.003 | 0.75 | 0.0 | 0.05 | 14.96 | 0.01 | 2.257 | 5.77 | 0.00 | 5.1 | 94.9 | 0.0 | -1.32 | 0.90 | 0.84 | — | 4.5 | 0.002 | 0.55 | 0.0 | 0.04 | 14.95 | 0.00 | 2.178 | 9.67 | 0.06 | 4.6 | 95.4 | 0.0 | 0.26 | 0.30 | 0.90 | 0.84 | — | 16671 | 2075 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7S9V | 24938 | 2024-04-08 | 2021-09-21 | 3.3 | 3.25 | — | 3.4 | 0.007 | 0.86 | 0.0 | 0.05 | 13.96 | 0.01 | 2.257 | 2.04 | 0.00 | 5.1 | 94.9 | 0.0 | -1.75 | 0.83 | 0.82 | 2.23 | 3.4 | 0.002 | 0.53 | 0.0 | 0.04 | 15.39 | 0.00 | 2.211 | 3.66 | 2.04 | 3.0 | 97.0 | 0.0 | -0.20 | 1.19 | 0.83 | 0.82 | 1.99 | 14286 | 1825 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 7MJP | 23881 | 2024-04-08 | 2021-04-20 | 4.2 | 4.40 | — | 4.3 | 0.008 | 1.11 | 0.0 | 0.07 | 10.54 | 0.01 | 1.477 | 2.76 | 0.00 | 9.1 | 90.9 | 0.0 | -1.16 | 0.51 | 0.65 | — | 4.4 | 0.002 | 0.62 | 0.0 | 0.05 | 8.27 | 0.00 | 2.278 | 0.82 | 0.00 | 8.1 | 91.9 | 0.0 | -0.47 | 0.45 | 0.56 | 0.70 | — | 14163 | 2818 | 10 | 0 | 8 | 0 | 0 | logfile |
✔ | 7R8A | 24313 | 2024-04-07 | 2021-06-26 | 2.9 | 3.05 | — | 3.0 | 0.003 | 0.57 | 0.0 | 0.04 | 13.81 | 0.00 | 2.305 | 6.32 | 3.39 | 4.6 | 95.3 | 0.1 | -1.64 | 0.66 | 0.81 | 2.32 | 3.0 | 0.002 | 0.57 | 0.0 | 0.04 | 15.81 | 0.00 | 2.251 | 5.75 | 2.86 | 4.8 | 95.2 | 0.0 | 1.19 | 1.00 | 0.75 | 0.91 | 2.98 | 10530 | 1332 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7EoS | 31229 | 2024-04-12 | 2021-04-22 | 3.9 | 4.43 | — | 3.9 | 0.002 | 0.42 | 0.0 | 0.04 | 9.75 | 0.00 | 2.254 | 6.49 | 1.89 | 4.1 | 95.8 | 0.1 | 0.47 | 0.88 | 0.78 | 1.32 | 4.0 | 0.002 | 0.65 | 0.0 | 0.04 | 12.37 | 0.00 | 2.048 | 12.13 | 1.93 | 5.5 | 94.4 | 0.1 | -0.39 | 1.68 | 0.90 | 0.82 | 1.19 | 24600 | 3106 | 8 | 0 | 18 | 0 | 0 | logfile |
✔ | 7MR0 | 23952 | 2024-04-10 | 2021-05-07 | 3.7 | 4.10 | — | 4.0 | 0.003 | 0.81 | 0.0 | 0.05 | 15.13 | 0.01 | 2.284 | 4.14 | 0.44 | 5.8 | 94.2 | 0.0 | -1.82 | 0.84 | 0.82 | 1.66 | 4.0 | 0.002 | 0.56 | 0.0 | 0.04 | 16.25 | 0.00 | 2.202 | 7.15 | 1.46 | 5.8 | 94.2 | 0.0 | 0.00 | 0.31 | 0.84 | 0.83 | 1.81 | 19282 | 2400 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N4X | 24180 | 2024-04-06 | 2021-06-04 | 3.33 | 3.49 | — | 3.5 | 0.014 | 1.76 | 0.0 | 0.21 | 15.86 | 0.01 | 2.134 | 5.53 | 1.23 | 7.5 | 92.5 | 0.0 | -3.15 | 0.52 | 0.76 | 2.75 | 3.5 | 0.002 | 0.56 | 0.0 | 0.04 | 15.07 | 0.00 | 2.180 | 5.46 | 2.22 | 3.3 | 96.7 | 0.0 | 0.44 | 0.92 | 0.71 | 0.87 | 2.32 | 7647 | 953 | 5 | 0 | 13 | 0 | 0 | logfile |
✔ | 6SWY | 10333 | 2024-04-09 | 2019-09-24 | 3.2 | 3.32 | 3.04 | 3.3 | 0.004 | 0.62 | 0.0 | 0.04 | 14.00 | 0.00 | 2.202 | 6.33 | 0.06 | 6.0 | 94.0 | 0.0 | 0.07 | 0.78 | 0.86 | 2.96 | 3.3 | 0.002 | 0.51 | 0.0 | 0.04 | 15.50 | 0.00 | 2.247 | 5.19 | 1.82 | 5.1 | 94.9 | 0.0 | 1.52 | 1.13 | 0.78 | 0.87 | 2.46 | 16057 | 1876 | 5 | 0 | 154 | 0 | 0 | logfile |