The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8FJP | 29245 | 2023-12-13 | 2022-12-20 | 3.3 | 3.44 | 3.57 | 3.4 | 0.004 | 0.88 | 0.0 | 0.06 | 17.12 | 0.01 | 2.224 | 6.09 | 0.67 | 5.7 | 94.3 | 0.0 | -1.82 | 0.76 | 0.80 | 2.40 | 3.4 | 0.004 | 0.65 | 0.0 | 0.05 | 17.81 | 0.00 | 2.098 | 11.13 | 0.59 | 6.3 | 93.7 | 0.0 | -1.17 | 0.45 | 0.76 | 0.81 | 2.16 | 23390 | 2932 | 3 | 0 | 3 | 0 | 0 | logfile |
✔ | 6o1V | 0606 | 2023-12-09 | 2019-02-21 | 3.2 | 3.50 | — | 3.6 | 0.014 | 1.79 | 0.0 | 0.08 | 13.83 | 0.01 | 1.933 | 6.31 | 0.48 | 4.7 | 95.3 | 0.0 | -2.71 | 0.46 | 0.70 | 3.04 | 3.6 | 0.003 | 0.60 | 0.0 | 0.04 | 16.17 | 0.00 | 1.927 | 6.41 | 0.68 | 2.1 | 97.9 | 0.0 | 0.97 | 1.26 | 0.58 | 0.82 | 2.27 | 9711 | 1179 | 3 | 0 | 28 | 0 | 0 | logfile |
✔ | 7CCQ | 30339 | 2023-12-10 | 2020-06-17 | 3.8 | 3.94 | — | 3.8 | 0.010 | 1.03 | 0.0 | 0.06 | 24.88 | 0.01 | 2.235 | 4.76 | 0.00 | 4.3 | 95.7 | 0.0 | -2.89 | 0.84 | 0.83 | 2.29 | 3.8 | 0.004 | 0.66 | 0.0 | 0.04 | 26.53 | 0.00 | 2.071 | 14.39 | 0.32 | 4.3 | 95.7 | 0.0 | 1.08 | 1.28 | 0.83 | 0.83 | 1.16 | 14857 | 1101 | 11 | 294 | 0 | 0 | 0 | logfile |
✔ | 7KA3 | 22757 | 2023-12-09 | 2020-09-29 | 3.3 | 3.20 | — | 3.4 | 0.004 | 0.76 | 0.0 | 0.04 | 13.66 | 0.01 | 2.294 | 3.99 | 0.36 | 2.9 | 97.1 | 0.0 | -2.21 | 0.76 | 0.82 | 1.82 | 3.3 | 0.003 | 0.52 | 0.0 | 0.04 | 15.70 | 0.00 | 2.241 | 7.22 | 0.27 | 3.5 | 96.5 | 0.0 | 1.91 | 0.50 | 0.77 | 0.84 | 1.09 | 10472 | 1372 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JGH | 22327 | 2023-12-11 | 2020-07-19 | 3.36 | 3.67 | — | 3.6 | 0.007 | 0.83 | 1.0 | 0.08 | 11.77 | 0.00 | 2.092 | 7.77 | 0.39 | 5.3 | 94.7 | 0.0 | -0.15 | 0.55 | 0.63 | 1.95 | 3.6 | 0.003 | 0.53 | 1.0 | 0.05 | 14.03 | 0.00 | 1.967 | 14.51 | 0.15 | 7.9 | 92.1 | 0.0 | 0.40 | 0.66 | 0.60 | 0.71 | 2.16 | 19608 | 1421 | 3 | 0 | 12 | 0 | 7725 | logfile |
✔ | 7ML4 | 23908 | 2023-12-09 | 2021-04-27 | 3.1 | 4.67 | — | 2.5 | 0.015 | 1.09 | 0.0 | 0.05 | 17.00 | 0.01 | 1.769 | 29.17 | 12.47 | 10.6 | 89.1 | 0.2 | -2.14 | 0.58 | 0.51 | 1.65 | 2.4 | 0.004 | 0.68 | 0.0 | 0.04 | 16.58 | 0.00 | 1.975 | 19.27 | 0.13 | 7.9 | 92.0 | 0.1 | -0.77 | 1.22 | 0.81 | 0.78 | 1.42 | 62733 | 7907 | 42 | 91 | 138 | 0 | 0 | logfile |
✔ | 6DZY | 8942 | 2023-12-08 | 2018-07-05 | 4.1 | 4.52 | 4.39 | 4.6 | 0.015 | 0.95 | 4.0 | 0.17 | 12.08 | 0.01 | 1.386 | 9.20 | 1.32 | 4.7 | 95.2 | 0.1 | -2.99 | 0.42 | 0.61 | — | 4.5 | 0.003 | 0.77 | 0.0 | 0.04 | 12.92 | 0.00 | 2.135 | 18.03 | 0.00 | 4.9 | 95.0 | 0.1 | -0.58 | 1.87 | 0.44 | 0.68 | — | 7842 | 988 | 6 | 0 | 4 | 0 | 0 | logfile |
✔ | 6VFH | 21172 | 2023-12-16 | 2020-01-05 | 3.86 | 3.96 | 3.81 | 3.9 | 0.019 | 1.39 | 0.0 | 0.08 | 9.31 | 0.01 | 2.497 | 0.82 | 0.00 | 0.8 | 99.2 | 0.0 | 2.06 | 0.75 | 0.80 | 1.89 | 3.9 | 0.004 | 0.66 | 0.0 | 0.04 | 16.67 | 0.00 | 2.125 | 10.38 | 0.69 | 2.2 | 97.8 | 0.0 | 3.51 | 2.49 | 0.76 | 0.80 | 1.09 | 36984 | 4752 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 6LYU | 30018 | 2023-12-09 | 2020-02-15 | 4.2 | 4.46 | — | 4.2 | 0.009 | 1.16 | 6.0 | 0.06 | 15.38 | 0.01 | 1.986 | 57.04 | 1.18 | 23.1 | 76.2 | 0.7 | -6.16 | 0.86 | 0.81 | — | 4.2 | 0.003 | 0.80 | 0.0 | 0.04 | 13.80 | 0.00 | 2.070 | 23.31 | 0.00 | 11.4 | 88.4 | 0.1 | -2.63 | 0.88 | 0.85 | 0.79 | — | 11118 | 1430 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7FDi | 31544 | 2023-12-08 | 2021-07-16 | 3.12 | 3.24 | — | 3.2 | 0.005 | 0.64 | 0.0 | 0.05 | 15.54 | 0.00 | 2.109 | 15.52 | 0.15 | 3.7 | 96.3 | 0.0 | -0.19 | 0.61 | 0.78 | 3.28 | 3.2 | 0.003 | 0.64 | 0.0 | 0.04 | 15.06 | 0.00 | 2.089 | 12.78 | 0.30 | 2.8 | 97.2 | 0.0 | 1.13 | 1.12 | 0.60 | 0.78 | 2.57 | 6403 | 788 | 4 | 0 | 5 | 0 | 0 | logfile |
✔ | 7DCR | 30640 | 2023-12-07 | 2020-10-26 | 3.15 | 3.27 | — | 3.2 | 0.005 | 0.89 | 1.0 | 0.06 | 10.49 | 0.01 | 2.260 | 4.10 | 0.63 | 3.0 | 96.7 | 0.3 | -4.71 | 0.66 | 0.78 | 3.15 | 3.2 | 0.002 | 0.59 | 0.0 | 0.04 | 13.95 | 0.00 | 2.155 | 7.76 | 0.47 | 3.3 | 96.7 | 0.0 | 0.55 | 0.69 | 0.67 | 0.81 | 2.29 | 5653 | 711 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6VFi | 21173 | 2023-12-08 | 2020-01-05 | 4.54 | 4.63 | 4.96 | 4.5 | 0.018 | 1.47 | 0.0 | 0.09 | 10.93 | 0.01 | 2.449 | 0.53 | 0.00 | 1.3 | 98.7 | 0.0 | 1.21 | 0.80 | 0.78 | — | 4.5 | 0.003 | 0.69 | 0.0 | 0.04 | 13.66 | 0.00 | 1.654 | 28.86 | 0.00 | 2.9 | 97.1 | 0.0 | 1.43 | 2.11 | 0.80 | 0.80 | — | 58488 | 7560 | 48 | 0 | 0 | 0 | 0 | logfile |
✔ | 8GQY | 34203 | 2023-12-09 | 2022-08-31 | 3.4 | 2.82 | 3.40 | 3.6 | 0.005 | 0.66 | 0.0 | 0.04 | 12.58 | 0.00 | 2.117 | 7.22 | 5.67 | 3.6 | 96.4 | 0.0 | -7.14 | 0.69 | 0.86 | 3.37 | 3.6 | 0.003 | 0.65 | 0.0 | 0.04 | 15.11 | 0.00 | 2.171 | 7.06 | 0.70 | 1.8 | 98.2 | 0.0 | -0.57 | 1.39 | 0.66 | 0.86 | 2.19 | 9515 | 1265 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DD7 | 27335 | 2023-12-09 | 2022-06-17 | 3.3 | 3.57 | 3.30 | 3.4 | 0.005 | 0.94 | 0.0 | 0.05 | 17.63 | 0.01 | 2.272 | 11.26 | 0.44 | 6.7 | 93.3 | 0.0 | -2.46 | 0.82 | 0.77 | 1.51 | 3.4 | 0.003 | 0.65 | 0.0 | 0.04 | 17.63 | 0.00 | 2.145 | 12.28 | 0.17 | 5.7 | 94.3 | 0.0 | -0.13 | 0.58 | 0.85 | 0.83 | 1.53 | 10370 | 1275 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 6X2N | 22012 | 2023-12-16 | 2020-05-20 | 3.9 | 4.07 | — | 3.9 | 0.009 | 1.21 | 1.0 | 0.07 | 17.58 | 0.01 | 2.024 | 10.33 | 0.28 | 8.2 | 91.6 | 0.3 | -2.89 | 0.76 | 0.77 | 0.56 | 3.9 | 0.003 | 0.70 | 0.0 | 0.04 | 18.45 | 0.00 | 2.047 | 14.59 | 0.28 | 6.1 | 93.9 | 0.0 | -0.96 | 1.89 | 0.76 | 0.76 | 0.44 | 36079 | 4316 | 11 | 113 | 4 | 0 | 0 | logfile |
✔ | 6XBD | 22116 | 2023-12-11 | 2020-06-05 | 3.05 | 3.71 | — | 3.6 | 0.004 | 0.66 | 0.0 | 0.04 | 12.08 | 0.00 | 2.104 | 8.98 | 0.06 | 3.5 | 96.5 | 0.0 | -2.47 | 0.78 | 0.85 | 2.38 | 3.6 | 0.003 | 0.61 | 0.0 | 0.04 | 14.53 | 0.00 | 2.202 | 7.66 | 0.18 | 3.4 | 96.6 | 0.0 | 0.48 | 0.98 | 0.75 | 0.84 | 2.02 | 17433 | 2084 | 15 | 0 | 322 | 0 | 0 | logfile |
✔ | 6J0M | 9764 | 2023-12-09 | 2018-12-24 | 3.9 | 3.79 | — | 3.8 | 0.007 | 0.98 | 0.0 | 0.06 | 15.91 | 0.01 | 2.282 | 6.73 | 0.87 | 5.2 | 94.8 | 0.0 | -4.05 | 0.52 | 0.82 | 1.83 | 3.8 | 0.003 | 0.66 | 0.0 | 0.05 | 17.65 | 0.00 | 2.174 | 12.35 | 0.22 | 5.9 | 94.1 | 0.0 | -1.95 | 1.29 | 0.52 | 0.82 | 1.43 | 12585 | 1605 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6PK4 | 20354 | 2023-12-11 | 2019-06-28 | 3.5 | 4.11 | — | 4.0 | 0.011 | 1.37 | 12.0 | 0.09 | 12.05 | 0.01 | 1.380 | 11.51 | 1.44 | 7.5 | 91.6 | 0.9 | -4.81 | 0.69 | 0.77 | 2.05 | 4.0 | 0.003 | 0.79 | 0.0 | 0.05 | 14.86 | 0.00 | 2.039 | 14.94 | 0.36 | 4.8 | 95.2 | 0.0 | -1.26 | 0.90 | 0.69 | 0.77 | 1.79 | 17876 | 2236 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 8DQL | 27656 | 2023-12-08 | 2022-07-19 | 3.0 | 2.95 | 2.90 | 2.9 | 0.002 | 0.47 | 0.0 | 0.04 | 14.89 | 0.00 | 2.309 | 5.10 | 0.00 | 3.6 | 96.4 | 0.0 | 2.01 | 0.74 | 0.81 | 1.75 | 2.9 | 0.003 | 0.60 | 0.0 | 0.04 | 16.66 | 0.00 | 2.244 | 6.10 | 2.06 | 4.4 | 95.6 | 0.0 | 1.72 | 3.33 | 0.76 | 0.84 | 1.87 | 6402 | 771 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M69 | 23691 | 2023-12-12 | 2021-03-25 | 3.42 | 4.12 | 4.11 | 4.1 | 0.006 | 0.87 | 0.0 | 0.04 | 13.25 | 0.01 | 2.304 | 0.82 | 1.29 | 5.1 | 94.9 | 0.0 | -0.08 | 0.52 | 0.70 | 1.11 | 4.1 | 0.003 | 0.58 | 0.0 | 0.04 | 15.65 | 0.00 | 1.972 | 11.04 | 0.51 | 5.7 | 94.3 | 0.0 | 0.92 | 1.08 | 0.53 | 0.72 | 0.83 | 21781 | 1390 | 1 | 0 | 0 | 0 | 10898 | logfile |