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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7Uo4 | 26639 | 2023-12-09 | 2022-04-12 | 3.38 | 4.18 | 3.37 | 3.8 | 0.005 | 0.69 | 0.0 | 0.12 | 14.88 | 0.00 | 1.885 | 7.37 | 1.27 | 7.2 | 92.8 | 0.0 | -1.06 | 0.83 | 0.79 | 2.83 | 3.8 | 0.003 | 0.66 | 0.0 | 0.06 | 15.98 | 0.00 | 2.027 | 9.35 | 0.00 | 4.1 | 95.9 | 0.0 | 0.33 | 0.53 | 0.93 | 0.89 | 2.17 | 12470 | 1374 | 12 | 70 | 4 | 91 | 0 | logfile |
✔ | 7B1C | 11983 | 2023-12-11 | 2020-11-24 | 3.74 | 4.50 | 3.85 | 3.7 | 0.010 | 1.23 | 0.0 | 0.08 | 12.76 | 0.01 | 2.139 | 14.84 | 2.17 | 9.5 | 90.5 | 0.0 | -2.29 | 0.88 | 0.78 | 2.24 | 3.7 | 0.003 | 0.69 | 0.0 | 0.04 | 13.17 | 0.00 | 2.141 | 12.02 | 0.00 | 7.5 | 92.5 | 0.0 | -1.92 | 0.51 | 0.88 | 0.81 | 2.08 | 17197 | 2440 | 21 | 0 | 35 | 0 | 0 | logfile |
✔ | 7YGC | 33815 | 2023-12-08 | 2022-07-11 | 2.65 | 3.28 | 2.77 | 2.9 | 0.007 | 0.50 | 0.0 | 0.03 | 23.09 | 0.00 | 1.778 | 12.79 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.83 | — | 2.9 | 0.004 | 0.56 | 0.0 | 0.03 | 23.08 | 0.00 | 1.946 | 13.63 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.48 | 0.91 | 0.89 | — | 8690 | 0 | 3 | 407 | 6 | 0 | 0 | logfile |
✔ | 6CP7 | 7549 | 2023-12-08 | 2018-03-13 | 4.1 | 4.11 | — | 4.1 | 0.008 | 1.42 | 0.0 | 0.07 | 13.16 | 0.01 | 1.577 | 14.52 | 3.98 | 6.6 | 92.9 | 0.5 | -4.99 | 0.50 | 0.68 | — | 4.1 | 0.004 | 0.93 | 0.0 | 0.04 | 12.55 | 0.00 | 2.175 | 18.15 | 0.00 | 5.3 | 94.7 | 0.0 | -0.79 | 1.03 | 0.51 | 0.70 | — | 9164 | 1234 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 8HAL | 34595 | 2023-12-11 | 2022-10-26 | 4.4 | 3.43 | 4.32 | 3.4 | 0.003 | 0.63 | 0.0 | 0.04 | 24.76 | 0.00 | 2.187 | 12.41 | 0.00 | 1.7 | 98.3 | 0.0 | 1.26 | 0.85 | 0.73 | — | 2.9 | 0.004 | 0.69 | 0.0 | 0.04 | 26.75 | 0.00 | 2.139 | 20.92 | 0.00 | 2.9 | 97.1 | 0.0 | 0.63 | 2.72 | 0.87 | 0.80 | — | 16585 | 1292 | 11 | 302 | 0 | 0 | 0 | logfile |
✔ | 8DK2 | 27481 | 2023-12-13 | 2022-07-01 | 4.1 | 4.81 | 4.17 | 4.1 | 0.002 | 0.47 | 0.0 | 0.04 | 13.70 | 0.00 | 1.988 | 7.72 | 2.88 | 3.7 | 96.3 | 0.0 | 2.05 | 0.84 | 0.80 | — | 4.0 | 0.002 | 0.48 | 0.0 | 0.04 | 14.06 | 0.00 | 2.036 | 6.61 | 0.00 | 3.3 | 96.7 | 0.0 | 2.21 | 0.59 | 0.84 | 0.80 | — | 23727 | 2840 | 12 | 52 | 4 | 0 | 0 | logfile |
✔ | 7LYP | 23598 | 2023-12-13 | 2021-03-07 | 4.05 | 4.38 | — | 4.1 | 0.013 | 1.73 | 0.0 | 0.09 | 12.97 | 0.01 | 2.509 | 0.28 | 0.71 | 6.7 | 92.7 | 0.6 | -1.22 | 0.82 | 0.81 | — | 4.1 | 0.004 | 0.65 | 0.0 | 0.04 | 12.56 | 0.00 | 2.051 | 9.77 | 0.00 | 5.3 | 94.7 | 0.0 | 0.04 | 0.68 | 0.83 | 0.82 | — | 23504 | 2985 | 6 | 0 | 28 | 0 | 0 | logfile |
✔ | 6TD6 | 10464 | 2023-12-10 | 2019-11-07 | 4.76 | 5.03 | — | 4.8 | 0.010 | 1.11 | 0.0 | 0.07 | 17.68 | 0.01 | 1.777 | 55.96 | 0.35 | 22.8 | 76.8 | 0.4 | -6.33 | 0.62 | 0.70 | — | 4.8 | 0.003 | 0.68 | 0.0 | 0.04 | 14.07 | 0.00 | 1.916 | 18.91 | 0.00 | 11.0 | 89.0 | 0.0 | -1.50 | 1.66 | 0.59 | 0.69 | — | 15680 | 982 | 4 | 0 | 3 | 0 | 7766 | logfile |
✔ | 7Z4E | 14494 | 2023-12-11 | 2022-03-03 | 4.14 | 5.32 | 4.15 | 4.2 | 0.004 | 0.55 | 0.0 | 0.04 | 17.53 | 0.00 | 2.196 | 9.63 | 1.64 | 2.0 | 98.0 | 0.0 | 0.67 | 0.88 | 0.76 | — | 4.3 | 0.004 | 0.64 | 0.0 | 0.04 | 17.95 | 0.00 | 2.129 | 21.56 | 0.00 | 3.9 | 96.1 | 0.0 | 0.49 | 3.44 | 0.90 | 0.82 | — | 14069 | 1357 | 4 | 142 | 0 | 0 | 0 | logfile |
✔ | 7SK8 | 25176 | 2023-12-10 | 2021-10-19 | 3.3 | 3.55 | — | 3.5 | 0.007 | 0.73 | 0.0 | 0.06 | 15.20 | 0.00 | 2.265 | 2.62 | 0.00 | 5.2 | 94.8 | 0.0 | -0.08 | 0.70 | 0.83 | 3.30 | 3.5 | 0.004 | 0.51 | 0.0 | 0.04 | 14.10 | 0.00 | 2.038 | 4.66 | 0.00 | 6.7 | 93.3 | 0.0 | 0.08 | 0.28 | 0.69 | 0.83 | 3.39 | 13389 | 835 | 7 | 0 | 8 | 0 | 6513 | logfile |
✔ | 8E29 | 27829 | 2023-12-08 | 2022-08-14 | 3.1 | 3.72 | 3.29 | 3.6 | 0.012 | 1.14 | 0.0 | 0.07 | 17.04 | 0.01 | 2.305 | 6.53 | 0.66 | 1.5 | 98.5 | 0.0 | -1.55 | 0.70 | 0.79 | 3.22 | 3.6 | 0.002 | 0.54 | 0.0 | 0.04 | 17.61 | 0.00 | 2.212 | 6.28 | 0.00 | 2.0 | 98.0 | 0.0 | 0.40 | 0.39 | 0.61 | 0.73 | 2.71 | 6197 | 692 | 2 | 33 | 0 | 0 | 0 | logfile |
✔ | 6BX3 | 7303 | 2023-12-09 | 2017-12-16 | 4.3 | 4.71 | — | 4.4 | 0.007 | 1.49 | 0.0 | 0.08 | 12.65 | 0.01 | 1.094 | 24.88 | 0.97 | 18.8 | 81.2 | 0.1 | -5.00 | 0.74 | 0.72 | — | 4.4 | 0.004 | 0.86 | 0.0 | 0.05 | 13.11 | 0.00 | 2.070 | 24.58 | 0.00 | 17.2 | 82.7 | 0.1 | -3.48 | 1.39 | 0.74 | 0.72 | — | 10456 | 1413 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QTK | 14143 | 2023-12-07 | 2022-01-14 | 3.84 | 4.13 | — | 4.0 | 0.004 | 0.73 | 1.0 | 0.05 | 13.16 | 0.00 | 2.182 | 9.44 | 0.54 | 4.9 | 95.0 | 0.2 | -0.03 | 0.61 | 0.79 | 1.74 | 4.0 | 0.003 | 0.71 | 0.0 | 0.05 | 14.52 | 0.00 | 2.129 | 12.28 | 0.00 | 5.2 | 94.7 | 0.2 | -0.35 | 0.56 | 0.62 | 0.80 | 1.76 | 5009 | 643 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7JPS | 22421 | 2023-12-11 | 2020-08-09 | 4.4 | 5.22 | — | 3.8 | 0.006 | 1.19 | 1.0 | 0.06 | 16.82 | 0.01 | 2.102 | 4.24 | 0.00 | 3.1 | 96.9 | 0.0 | -2.45 | 0.67 | 0.46 | — | 3.8 | 0.003 | 0.66 | 0.0 | 0.04 | 16.21 | 0.00 | 1.908 | 13.46 | 0.00 | 3.7 | 96.3 | 0.0 | 0.37 | 1.51 | 0.83 | 0.70 | — | 16352 | 1932 | 11 | 26 | 7 | 0 | 0 | logfile |
✔ | 6T7S | 10371 | 2023-12-13 | 2019-10-23 | 4.5 | 4.67 | — | 4.5 | 0.004 | 0.93 | 0.0 | 0.06 | 14.16 | 0.01 | 2.278 | 7.26 | 0.28 | 6.0 | 94.0 | 0.0 | -4.74 | 0.65 | 0.77 | — | 4.5 | 0.003 | 0.81 | 0.0 | 0.04 | 13.18 | 0.00 | 2.047 | 16.04 | 0.00 | 6.0 | 93.9 | 0.1 | -1.26 | 3.57 | 0.66 | 0.74 | — | 23436 | 3090 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SK9 | 25177 | 2023-12-09 | 2021-10-19 | 3.7 | 4.01 | — | 3.9 | 0.005 | 0.62 | 0.0 | 0.05 | 15.65 | 0.00 | 2.028 | 4.76 | 0.00 | 4.4 | 95.6 | 0.0 | 1.15 | 0.71 | 0.81 | 1.92 | 3.9 | 0.002 | 0.47 | 0.0 | 0.04 | 14.16 | 0.00 | 2.055 | 5.20 | 0.00 | 2.8 | 97.2 | 0.0 | 1.47 | 0.42 | 0.70 | 0.81 | 1.83 | 11261 | 716 | 4 | 0 | 3 | 0 | 5561 | logfile |
✔ | 7TCH | 25812 | 2023-12-08 | 2021-12-23 | 3.7 | 3.94 | 3.73 | 3.9 | 0.005 | 1.16 | 0.0 | 0.04 | 16.68 | 0.00 | 2.246 | 5.68 | 0.00 | 8.0 | 92.0 | 0.0 | 0.08 | 0.71 | 0.84 | 1.54 | 3.9 | 0.002 | 0.65 | 0.0 | 0.04 | 17.06 | 0.00 | 2.299 | 5.02 | 0.00 | 6.9 | 93.1 | 0.0 | 0.38 | 0.38 | 0.69 | 0.83 | 0.93 | 9043 | 1135 | 6 | 0 | 3 | 0 | 0 | logfile |
✔ | 6RiU | 4898 | 2023-12-07 | 2019-04-25 | 3.9 | 6.21 | 2.04 | 7.0 | 0.008 | 1.19 | 0.0 | 0.09 | 15.19 | 0.01 | 2.182 | 5.20 | 0.00 | 8.4 | 91.6 | 0.0 | -5.77 | 0.59 | 0.69 | 0.56 | 7.1 | 0.003 | 0.68 | 0.0 | 0.03 | 16.88 | 0.00 | 2.053 | 14.90 | 0.00 | 5.1 | 94.9 | 0.0 | -0.72 | 1.43 | 0.61 | 0.75 | 0.76 | 2882 | 182 | 2 | 0 | 0 | 0 | 1430 | logfile |
✔ | 7YG8 | 33811 | 2023-12-08 | 2022-07-11 | 2.97 | 3.59 | 3.04 | 3.0 | 0.002 | 0.48 | 0.0 | 0.03 | 23.19 | 0.00 | 2.042 | 13.48 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.89 | 0.82 | — | 3.0 | 0.006 | 0.64 | 0.0 | 0.04 | 23.44 | 0.00 | 1.840 | 19.39 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.38 | 0.91 | 0.89 | — | 8440 | 0 | 3 | 395 | 5 | 0 | 0 | logfile |
✔ | 7B1B | 11982 | 2023-12-10 | 2020-11-24 | 4.23 | 6.70 | 4.32 | 4.1 | 0.004 | 0.75 | 0.0 | 0.05 | 14.67 | 0.01 | 2.087 | 33.07 | 0.54 | 13.6 | 86.4 | 0.0 | -2.84 | 0.88 | 0.83 | — | 4.2 | 0.003 | 0.67 | 0.0 | 0.04 | 12.45 | 0.00 | 2.068 | 23.51 | 0.00 | 12.4 | 87.6 | 0.0 | -2.70 | 0.92 | 0.88 | 0.83 | — | 12870 | 1697 | 12 | 0 | 22 | 0 | 0 | logfile |