The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6ZYD | 11557 | 2023-12-16 | 2020-07-31 | 3.0 | 3.62 | 2.76 | 3.4 | 0.017 | 1.20 | 0.0 | 0.12 | 19.71 | 0.01 | 2.269 | 4.88 | 0.00 | 5.1 | 94.9 | 0.0 | -3.12 | 0.75 | 0.77 | 4.36 | 3.4 | 0.059 | 2.56 | 0.0 | 0.17 | 21.26 | 0.02 | 1.754 | 57.23 | 13.07 | 21.5 | 78.5 | 0.0 | -6.15 | 1.48 | 0.79 | 0.86 | 3.27 | 31423 | 1792 | 14 | 0 | 476 | 0 | 14490 | logfile |
✔ | 8oKR | 16930 | 2023-12-07 | 2023-03-29 | 2.86 | 3.36 | 2.66 | 3.4 | 0.007 | 1.56 | 0.0 | 0.09 | 22.91 | 0.01 | 1.489 | 4.96 | 0.00 | 0.0 | 100.0 | 0.0 | -4.51 | 0.55 | 0.67 | 7.31 | 3.4 | 0.191 | 6.68 | 64.0 | 0.43 | 28.26 | 0.04 | 1.558 | 166.46 | 10.71 | 46.7 | 40.0 | 13.3 | -7.58 | 2.35 | 0.64 | 0.88 | 1.62 | 1608 | 168 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 8TTW | 41613 | 2023-12-15 | 2023-08-15 | 2.96 | 3.21 | 3.03 | 3.3 | 0.005 | 1.03 | 1.0 | 0.05 | 18.56 | 0.00 | 1.953 | 31.63 | 10.42 | 7.5 | 91.8 | 0.7 | -2.50 | 0.69 | 0.82 | 2.69 | 3.3 | 0.007 | 0.80 | 0.0 | 0.05 | 17.95 | 0.01 | 2.074 | 9.91 | 10.11 | 7.6 | 92.0 | 0.3 | -1.68 | 0.39 | 0.69 | 0.86 | 2.59 | 31275 | 3744 | 69 | 0 | 162 | 0 | 0 | logfile |
✔ | 7YNL | 33965 | 2023-12-07 | 2022-07-31 | 2.6 | 2.16 | 2.41 | 3.2 | 0.009 | 2.40 | 0.0 | 0.06 | 16.15 | 0.05 | 2.128 | 26.40 | 0.00 | 8.9 | 91.1 | 0.0 | -6.11 | 0.27 | 0.35 | 2.03 | 3.4 | 0.004 | 0.96 | 0.0 | 0.05 | 18.12 | 0.00 | 2.218 | 11.58 | 8.44 | 9.8 | 90.2 | 0.0 | -4.15 | 3.90 | 0.39 | 0.64 | 2.49 | 4080 | 464 | 16 | 0 | 16 | 0 | 0 | logfile |
✔ | 6W6P | 21562 | 2023-12-12 | 2020-03-17 | 2.9 | 2.21 | — | 1.7 | 0.010 | 1.07 | 0.0 | 0.06 | 22.66 | 0.01 | 1.989 | 6.48 | 16.52 | 12.1 | 87.6 | 0.3 | -4.00 | 0.77 | 0.84 | 2.96 | 1.6 | 0.005 | 0.77 | 0.0 | 0.04 | 22.31 | 0.01 | 1.947 | 5.83 | 8.41 | 9.3 | 90.7 | 0.1 | -1.98 | 1.59 | 0.79 | 0.86 | 2.57 | 133554 | 5058 | 51 | 4378 | 4 | 0 | 0 | logfile |
✔ | 7CYD | 30497 | 2023-12-12 | 2020-09-03 | 3.55 | 3.92 | — | 3.9 | 0.009 | 1.21 | 15.0 | 0.09 | 15.76 | 0.01 | 1.838 | 30.73 | 9.09 | 5.6 | 94.3 | 0.1 | -3.27 | 0.74 | 0.73 | 1.51 | 3.8 | 0.007 | 1.04 | 0.0 | 0.06 | 16.59 | 0.01 | 1.956 | 28.61 | 7.95 | 10.6 | 89.3 | 0.1 | -2.58 | 0.86 | 0.82 | 0.80 | 1.38 | 22320 | 2892 | 12 | 0 | 72 | 0 | 0 | logfile |
✔ | 8iYK | 35824 | 2023-12-13 | 2023-04-05 | 2.95 | 3.32 | 3.08 | 3.2 | 0.003 | 0.64 | 1.0 | 0.05 | 18.22 | 0.00 | 2.066 | 11.71 | 7.67 | 7.1 | 92.3 | 0.6 | -1.67 | 0.78 | 0.87 | 2.43 | 3.2 | 0.003 | 0.63 | 0.0 | 0.04 | 18.30 | 0.00 | 2.038 | 11.71 | 7.89 | 6.7 | 92.8 | 0.5 | -1.63 | 0.21 | 0.78 | 0.87 | 2.36 | 77370 | 10248 | 45 | 0 | 3 | 0 | 0 | logfile |
✔ | 6oSL | 20185 | 2023-12-07 | 2019-05-01 | 3.0 | 3.04 | — | 3.0 | 0.010 | 1.06 | 0.0 | 0.07 | 13.47 | 0.00 | 2.308 | 12.61 | 2.44 | 12.3 | 87.7 | 0.0 | -4.40 | 0.45 | 0.79 | 1.34 | 3.0 | 0.005 | 0.78 | 0.0 | 0.06 | 15.86 | 0.00 | 2.273 | 12.36 | 7.80 | 8.2 | 91.8 | 0.0 | -3.35 | 1.24 | 0.45 | 0.80 | 2.29 | 4060 | 590 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 8iYL | 35825 | 2023-12-13 | 2023-04-05 | 3.0 | 3.35 | 3.11 | 3.2 | 0.004 | 0.66 | 0.0 | 0.05 | 18.10 | 0.01 | 2.040 | 11.95 | 7.11 | 7.1 | 92.3 | 0.6 | -1.70 | 0.78 | 0.84 | 2.48 | 3.2 | 0.003 | 0.64 | 0.0 | 0.05 | 18.21 | 0.01 | 2.035 | 11.75 | 7.69 | 7.1 | 92.4 | 0.6 | -1.60 | 0.23 | 0.79 | 0.85 | 2.42 | 77370 | 10248 | 45 | 0 | 3 | 0 | 0 | logfile |
✔ | 6WMP | 21850 | 2023-12-12 | 2020-04-21 | 2.98 | 3.16 | — | 3.1 | 0.011 | 0.93 | 0.0 | 0.06 | 18.69 | 0.01 | 1.965 | 9.61 | 12.01 | 13.6 | 86.2 | 0.2 | -5.30 | 0.72 | 0.83 | 2.98 | 3.1 | 0.003 | 0.66 | 0.0 | 0.04 | 18.79 | 0.00 | 1.975 | 8.03 | 7.39 | 9.1 | 90.8 | 0.1 | -2.15 | 0.46 | 0.72 | 0.84 | 2.44 | 22296 | 2879 | 9 | 47 | 3 | 0 | 0 | logfile |
✔ | 6YPU | 10869 | 2023-12-16 | 2020-04-16 | 2.9 | 2.97 | 2.78 | 2.9 | 0.012 | 0.99 | 0.0 | 0.06 | 22.80 | 0.01 | 1.849 | 6.04 | 11.02 | 9.3 | 90.5 | 0.2 | -3.96 | 0.78 | 0.85 | 2.54 | 2.9 | 0.005 | 0.65 | 0.0 | 0.04 | 22.33 | 0.00 | 1.860 | 5.37 | 7.11 | 6.6 | 93.3 | 0.1 | -0.86 | 0.27 | 0.79 | 0.88 | 2.35 | 33322 | 1496 | 17 | 1040 | 60 | 0 | 0 | logfile |
✔ | 7X27 | 32960 | 2023-12-12 | 2022-02-25 | 2.49 | 2.92 | 2.58 | 2.7 | 0.004 | 0.75 | 0.0 | 0.04 | 18.74 | 0.00 | 1.052 | 7.39 | 9.19 | 6.8 | 93.2 | 0.0 | -1.20 | 0.84 | 0.87 | 3.07 | 2.7 | 0.003 | 0.60 | 0.0 | 0.04 | 18.27 | 0.00 | 2.189 | 6.68 | 6.95 | 6.2 | 93.8 | 0.0 | -0.39 | 1.15 | 0.84 | 0.88 | 3.28 | 22770 | 2949 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Q66 | 13853 | 2023-12-07 | 2021-11-05 | 2.79 | 2.87 | 2.63 | 2.9 | 0.021 | 1.42 | 0.0 | 0.11 | 12.58 | 0.01 | 2.277 | 13.59 | 6.52 | 0.0 | 100.0 | 0.0 | -4.18 | 0.63 | 0.84 | 3.82 | 2.9 | 0.004 | 0.75 | 0.0 | 0.04 | 16.09 | 0.00 | 2.208 | 12.61 | 6.92 | 0.8 | 99.2 | 0.0 | -4.23 | 0.65 | 0.62 | 0.88 | 4.75 | 4807 | 682 | 22 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Q64 | 13851 | 2023-12-08 | 2021-11-05 | 2.76 | 2.81 | 2.66 | 2.9 | 0.014 | 1.34 | 0.0 | 0.09 | 10.20 | 0.01 | 2.276 | 7.23 | 3.83 | 8.3 | 91.7 | 0.0 | -6.01 | 0.58 | 0.78 | 3.39 | 2.8 | 0.007 | 0.74 | 0.0 | 0.04 | 14.97 | 0.00 | 2.095 | 13.26 | 6.91 | 7.5 | 92.5 | 0.0 | -5.63 | 0.76 | 0.59 | 0.86 | 3.88 | 7810 | 1100 | 30 | 0 | 0 | 0 | 0 | logfile |
✔ | 6YTF | 10915 | 2023-12-11 | 2020-04-24 | 3.0 | 3.05 | 2.90 | 3.0 | 0.010 | 0.92 | 0.0 | 0.05 | 23.23 | 0.01 | 1.898 | 15.26 | 11.09 | 8.7 | 91.0 | 0.2 | -4.10 | 0.71 | 0.71 | 1.43 | 3.0 | 0.005 | 0.78 | 0.0 | 0.04 | 22.41 | 0.01 | 1.867 | 13.68 | 6.86 | 7.8 | 92.0 | 0.2 | -0.82 | 1.19 | 0.73 | 0.74 | 1.33 | 16906 | 852 | 12 | 477 | 25 | 0 | 0 | logfile |
✔ | 7ML0 | 23904 | 2023-12-09 | 2021-04-27 | 3.0 | 3.82 | — | 2.2 | 0.018 | 1.12 | 0.0 | 0.06 | 19.83 | 0.01 | 1.912 | 37.28 | 20.13 | 15.6 | 84.2 | 0.3 | -3.87 | 0.62 | 0.63 | 2.22 | 2.2 | 0.003 | 0.78 | 0.0 | 0.04 | 18.67 | 0.00 | 2.053 | 17.73 | 6.77 | 7.9 | 92.0 | 0.1 | -1.16 | 1.64 | 0.84 | 0.84 | 2.00 | 64214 | 7986 | 40 | 132 | 139 | 0 | 0 | logfile |
✔ | 7CZT | 30516 | 2023-12-15 | 2020-09-09 | 2.7 | 2.78 | — | 2.7 | 0.011 | 0.98 | 0.0 | 0.07 | 17.52 | 0.01 | 1.981 | 13.57 | 11.97 | 9.9 | 89.1 | 1.0 | -3.68 | 0.73 | 0.81 | 2.38 | 2.7 | 0.004 | 0.75 | 0.0 | 0.05 | 17.06 | 0.00 | 2.116 | 8.41 | 6.62 | 7.5 | 92.5 | 0.1 | -1.12 | 1.26 | 0.73 | 0.80 | 2.15 | 31060 | 3872 | 31 | 0 | 70 | 0 | 0 | logfile |
✔ | 6WQN | 21872 | 2023-12-14 | 2020-04-29 | 2.9 | 2.43 | 2.85 | 2.8 | 0.003 | 0.49 | 3.0 | 0.03 | 22.14 | 0.01 | 1.951 | 9.03 | 2.31 | 2.9 | 97.1 | 0.0 | -3.39 | 0.75 | 0.85 | 3.70 | 2.8 | 0.005 | 0.80 | 0.0 | 0.04 | 22.72 | 0.01 | 2.057 | 4.76 | 6.57 | 5.8 | 94.2 | 0.0 | -2.52 | 0.35 | 0.76 | 0.87 | 3.55 | 80700 | 2646 | 28 | 2798 | 1 | 0 | 0 | logfile |
✔ | 8DE4 | 27384 | 2023-12-08 | 2022-06-19 | 2.9 | 3.20 | 2.90 | 3.3 | 0.009 | 0.79 | 0.0 | 0.23 | 18.02 | 0.01 | 2.096 | 10.13 | 4.35 | 3.0 | 97.0 | 0.0 | 0.28 | 0.50 | 0.66 | 1.62 | 3.3 | 0.003 | 0.59 | 0.0 | 0.04 | 16.55 | 0.00 | 2.129 | 11.83 | 6.52 | 6.7 | 93.3 | 0.0 | -0.43 | 1.21 | 0.52 | 0.69 | 2.03 | 6188 | 767 | 5 | 0 | 9 | 0 | 0 | logfile |
✔ | 8HPo | 34935 | 2023-12-14 | 2022-12-12 | 2.6 | 2.84 | 2.69 | 3.0 | 0.008 | 0.98 | 13.0 | 0.06 | 19.27 | 0.01 | 1.346 | 14.56 | 11.26 | 6.4 | 93.2 | 0.4 | -3.79 | 0.72 | 0.77 | 2.37 | 3.0 | 0.003 | 0.66 | 0.0 | 0.04 | 19.01 | 0.00 | 1.932 | 9.62 | 6.49 | 4.8 | 95.1 | 0.1 | -0.41 | 0.57 | 0.72 | 0.78 | 2.16 | 27951 | 3571 | 13 | 0 | 6 | 0 | 0 | logfile |