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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6PUT | 20481 | 2023-12-09 | 2019-07-18 | 2.9 | 3.22 | 2.96 | 3.2 | 0.007 | 0.82 | 0.0 | 0.05 | 19.07 | 0.01 | 0.000 | 5.13 | 0.20 | 2.5 | 97.5 | 0.0 | -3.43 | 0.73 | 0.90 | 4.56 | 3.2 | 0.004 | 0.55 | 0.0 | 0.04 | 20.78 | 0.00 | 0.000 | 8.00 | 1.42 | 1.9 | 98.1 | 0.0 | 0.69 | 0.88 | 0.65 | 0.88 | 4.23 | 10976 | 1170 | 28 | 68 | 8 | 308 | 0 | logfile |
✔ | 6PUW | 20483 | 2023-12-09 | 2019-07-18 | 2.9 | 3.21 | 2.93 | 3.1 | 0.013 | 0.77 | 0.0 | 0.04 | 20.01 | 0.00 | 0.000 | 7.69 | 0.20 | 2.1 | 97.9 | 0.0 | -2.24 | 0.74 | 0.90 | 4.70 | 3.1 | 0.004 | 0.58 | 0.0 | 0.04 | 21.72 | 0.00 | 0.000 | 8.97 | 1.84 | 3.2 | 96.8 | 0.0 | 0.48 | 0.38 | 0.70 | 0.90 | 4.27 | 11116 | 1170 | 28 | 72 | 10 | 312 | 0 | logfile |
✔ | 8PVB | 17960 | 2023-12-11 | 2023-07-17 | 3.6 | 3.05 | 3.14 | 3.2 | 0.011 | 1.70 | 0.0 | 0.09 | 14.68 | 0.01 | 0.000 | 1.17 | 1.27 | 1.6 | 98.4 | 0.0 | -0.14 | 0.60 | 0.79 | 4.63 | 3.2 | 0.002 | 0.56 | 0.0 | 0.04 | 14.86 | 0.00 | 0.000 | 5.60 | 0.00 | 0.8 | 99.2 | 0.0 | 1.21 | 1.01 | 0.72 | 0.83 | 3.99 | 19225 | 2275 | 25 | 0 | 80 | 0 | 0 | logfile |
✔ | 6PUZ | 20485 | 2023-12-09 | 2019-07-18 | 2.8 | 3.10 | 2.87 | 3.1 | 0.008 | 0.86 | 0.0 | 0.05 | 19.79 | 0.01 | 0.000 | 5.85 | 0.19 | 2.2 | 97.8 | 0.0 | -2.67 | 0.74 | 0.89 | 4.50 | 3.0 | 0.004 | 0.53 | 0.0 | 0.04 | 21.50 | 0.00 | 0.000 | 7.83 | 0.97 | 2.2 | 97.8 | 0.0 | 0.65 | 0.40 | 0.70 | 0.90 | 4.00 | 11702 | 1230 | 28 | 72 | 10 | 340 | 0 | logfile |
✔ | 7EFC | 31083 | 2023-12-07 | 2021-03-21 | 1.7 | 1.76 | 1.76 | 1.9 | 0.032 | 3.16 | 16.0 | 0.09 | 14.88 | 0.02 | 0.001 | 2.15 | 2.15 | 2.5 | 96.6 | 0.8 | -0.84 | 0.75 | 0.84 | 6.42 | 1.9 | 0.004 | 0.75 | 0.0 | 0.05 | 14.46 | 0.00 | 1.841 | 7.51 | 1.08 | 3.2 | 96.8 | 0.0 | 0.63 | 0.92 | 0.80 | 0.85 | 6.49 | 4004 | 480 | 4 | 0 | 4 | 156 | 0 | logfile |
✔ | 6ZP7 | 11337 | 2023-12-13 | 2020-07-08 | 3.3 | 4.01 | 3.43 | 3.7 | 0.013 | 0.92 | 0.0 | 0.17 | 14.26 | 0.01 | 0.008 | 16.12 | 0.52 | 3.0 | 97.0 | 0.0 | -0.92 | 0.64 | 0.59 | 1.49 | 3.7 | 0.003 | 0.81 | 0.0 | 0.11 | 14.90 | 0.00 | 0.792 | 10.38 | 0.36 | 3.7 | 96.3 | 0.0 | 0.07 | 1.34 | 0.81 | 0.84 | 2.06 | 23615 | 2861 | 33 | 0 | 92 | 0 | 0 | logfile |
✔ | 6ZP5 | 11336 | 2023-12-13 | 2020-07-08 | 3.1 | 3.90 | 3.32 | 3.6 | 0.013 | 0.92 | 0.0 | 0.15 | 14.27 | 0.01 | 0.012 | 14.22 | 0.52 | 3.0 | 97.0 | 0.0 | -0.93 | 0.67 | 0.64 | 2.54 | 3.6 | 0.003 | 0.80 | 0.0 | 0.11 | 14.73 | 0.00 | 0.790 | 9.42 | 0.36 | 3.6 | 96.4 | 0.0 | 0.28 | 0.66 | 0.82 | 0.85 | 2.13 | 23615 | 2861 | 33 | 0 | 92 | 0 | 0 | logfile |
✔ | 8UF0 | 42181 | 2023-12-14 | 2023-10-03 | 2.02 | 2.34 | 2.08 | 2.2 | 0.007 | 0.76 | 0.0 | 0.05 | 17.50 | 0.01 | 0.013 | 4.37 | 0.54 | 1.8 | 98.2 | 0.0 | 0.09 | 0.84 | 0.89 | 5.17 | 2.2 | 0.003 | 0.58 | 0.0 | 0.05 | 17.89 | 0.01 | 2.174 | 2.91 | 0.94 | 1.3 | 98.7 | 0.0 | 1.32 | 0.37 | 0.81 | 0.87 | 3.91 | 27000 | 3456 | 48 | 0 | 0 | 804 | 0 | logfile |
✔ | 7B0N | 11969 | 2023-12-12 | 2020-11-20 | 3.7 | 3.22 | 3.70 | 3.2 | 0.018 | 1.20 | 0.0 | 0.45 | 16.45 | 0.01 | 0.019 | 3.79 | 0.07 | 5.5 | 94.4 | 0.1 | -2.92 | 0.59 | 0.74 | 2.70 | 3.2 | 0.004 | 0.84 | 0.0 | 0.13 | 16.40 | 0.00 | 1.903 | 8.56 | 0.15 | 4.5 | 95.5 | 0.0 | 0.03 | 2.50 | 0.60 | 0.75 | 2.24 | 129439 | 8092 | 62 | 0 | 38 | 0 | 64087 | logfile |
✔ | 5A1A | 2984 | 2023-12-16 | 2015-04-29 | 2.2 | 2.04 | 2.58 | 2.5 | 0.009 | 1.21 | 0.0 | 0.04 | 13.18 | 0.01 | 0.020 | 14.13 | 1.03 | 3.9 | 95.5 | 0.6 | -1.86 | 0.53 | 0.76 | 4.20 | 2.5 | 0.003 | 0.67 | 0.0 | 0.04 | 17.52 | 0.00 | 1.945 | 11.26 | 3.20 | 2.9 | 97.0 | 0.1 | -0.53 | 0.61 | 0.53 | 0.79 | 3.78 | 33696 | 4088 | 12 | 0 | 20 | 776 | 0 | logfile |
✔ | 7PQU | 13605 | 2023-12-09 | 2021-09-20 | 3.03 | 1.80 | — | 3.4 | 0.008 | 0.88 | 0.0 | 0.05 | 16.74 | 0.01 | 0.051 | 14.73 | 5.14 | 7.9 | 92.0 | 0.1 | -3.95 | 0.77 | 0.80 | 2.84 | 3.5 | 0.003 | 0.62 | 0.0 | 0.04 | 16.43 | 0.01 | 2.258 | 9.01 | 0.18 | 6.0 | 94.0 | 0.0 | -0.28 | 0.99 | 0.75 | 0.79 | 2.45 | 10798 | 1312 | 12 | 0 | 8 | 14 | 0 | logfile |
✔ | 7EPP | 31248 | 2023-12-14 | 2021-04-27 | 2.4 | 2.51 | — | 2.6 | 0.004 | 0.67 | 0.0 | 0.04 | 16.13 | 0.01 | 0.073 | 3.24 | 3.57 | 7.3 | 92.7 | 0.0 | -2.99 | 0.64 | 0.81 | 3.73 | 2.6 | 0.004 | 0.73 | 0.0 | 0.05 | 16.70 | 0.01 | 2.013 | 5.31 | 1.12 | 7.3 | 92.7 | 0.0 | -1.67 | 0.53 | 0.69 | 0.85 | 3.46 | 80520 | 10020 | 60 | 0 | 0 | 1800 | 0 | logfile |
✔ | 5Li4 | 4052 | 2023-12-12 | 2016-07-14 | 4.2 | 5.13 | — | 4.0 | 0.053 | 3.07 | 114.0 | 0.34 | 14.44 | 0.02 | 0.111 | 93.07 | 2.94 | 14.0 | 79.1 | 6.9 | -4.32 | 0.24 | 0.30 | — | 4.1 | 0.004 | 1.04 | 0.0 | 0.05 | 13.71 | 0.01 | 1.950 | 32.75 | 0.09 | 15.2 | 83.8 | 1.0 | -3.85 | 4.19 | 0.34 | 0.58 | — | 20070 | 2562 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XDi | 33148 | 2023-12-07 | 2022-03-27 | 3.8 | 3.93 | 3.63 | 3.9 | 0.003 | 0.71 | 0.0 | 0.04 | 16.85 | 0.01 | 0.137 | 25.89 | 0.56 | 4.7 | 94.6 | 0.6 | 0.46 | 0.58 | 0.82 | 1.80 | 3.9 | 0.004 | 0.79 | 0.0 | 0.04 | 17.10 | 0.01 | 2.125 | 14.62 | 0.92 | 5.3 | 94.0 | 0.6 | 0.66 | 1.35 | 0.58 | 0.82 | 1.62 | 53669 | 6804 | 42 | 0 | 0 | 0 | 0 | logfile |
✔ | 7AQD | 11864 | 2023-12-15 | 2020-10-21 | 3.1 | 3.48 | — | 3.2 | 0.005 | 1.09 | 11.0 | 0.05 | 23.20 | 0.01 | 0.152 | 6.41 | 1.12 | 5.2 | 94.5 | 0.3 | -2.11 | 0.78 | 0.72 | 1.63 | 3.2 | 0.009 | 0.76 | 0.0 | 0.04 | 23.42 | 0.01 | 1.871 | 15.74 | 0.98 | 7.6 | 92.4 | 0.1 | -1.22 | 2.50 | 0.90 | 0.90 | 1.81 | 94357 | 3543 | 32 | 3106 | 0 | 0 | 0 | logfile |
✔ | 5M32 | 4146 | 2023-12-13 | 2016-10-14 | 3.8 | 3.96 | — | 3.8 | 0.009 | 1.47 | 12.0 | 0.07 | 13.19 | 0.01 | 0.185 | 19.65 | 3.10 | 14.4 | 83.9 | 1.7 | -5.42 | 0.81 | 0.79 | 1.92 | 3.8 | 0.003 | 0.81 | 0.0 | 0.04 | 14.67 | 0.00 | 1.490 | 14.96 | 0.38 | 10.8 | 88.9 | 0.3 | -1.88 | 1.49 | 0.82 | 0.81 | 1.22 | 76085 | 10500 | 52 | 0 | 8 | 0 | 0 | logfile |
✔ | 6Y7C | 10713 | 2023-12-13 | 2020-02-28 | 3.8 | 5.42 | 3.84 | 2.8 | 0.015 | 1.44 | 1.0 | 0.06 | 22.29 | 0.02 | 0.193 | 10.34 | 1.00 | 14.3 | 85.4 | 0.3 | -5.44 | 0.89 | 0.71 | 0.41 | 2.6 | 0.013 | 0.97 | 0.0 | 0.04 | 22.49 | 0.01 | 1.954 | 38.93 | 0.61 | 16.1 | 83.8 | 0.2 | -3.91 | 2.59 | 0.92 | 0.79 | 0.41 | 79690 | 5381 | 34 | 1735 | 0 | 0 | 0 | logfile |
✔ | 5ND1 | 3619 | 2023-12-10 | 2017-03-07 | 3.7 | 3.86 | — | 3.9 | 0.017 | 2.27 | 54.0 | 0.15 | 22.44 | 0.01 | 0.204 | 100.40 | 32.66 | 7.8 | 89.7 | 2.5 | -2.95 | 0.47 | 0.82 | 1.08 | 3.9 | 0.005 | 0.84 | 0.0 | 0.04 | 18.26 | 0.00 | 2.091 | 15.15 | 0.95 | 9.3 | 90.2 | 0.5 | -1.95 | 1.59 | 0.48 | 0.83 | 1.01 | 14963 | 1977 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J9S | 6272 | 2023-12-09 | 2015-02-19 | 2.6 | 3.83 | — | 3.5 | 0.020 | 1.80 | 0.0 | 0.12 | 18.55 | 0.01 | 0.216 | 25.10 | 6.86 | 1.3 | 98.0 | 0.8 | 1.97 | 0.68 | 0.76 | 3.15 | 3.5 | 0.003 | 0.62 | 0.0 | 0.04 | 17.43 | 0.00 | 1.145 | 9.20 | 1.43 | 1.5 | 98.5 | 0.0 | 1.37 | 1.90 | 0.70 | 0.89 | 3.19 | 9813 | 1191 | 3 | 0 | 15 | 315 | 0 | logfile |
✔ | 8PDQ | 17618 | 2023-12-16 | 2023-06-12 | 3.1 | 3.25 | 3.11 | 3.2 | 0.004 | 0.57 | 0.0 | 0.04 | 15.29 | 0.00 | 0.235 | 15.65 | 0.00 | 1.9 | 98.1 | 0.0 | 0.16 | 0.77 | 0.82 | 2.60 | 3.2 | 0.003 | 0.51 | 0.0 | 0.04 | 16.33 | 0.00 | 2.136 | 10.59 | 0.23 | 1.9 | 98.1 | 0.0 | 1.59 | 0.39 | 0.78 | 0.83 | 2.34 | 33176 | 4070 | 33 | 77 | 0 | 0 | 0 | logfile |