The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7QV5 | 14167 | 2023-12-07 | 2022-01-19 | 3.0 | 3.03 | 1.88 | 3.0 | 0.085 | 0.44 | 0.0 | 0.06 | 9.44 | 0.00 | 2.689 | 1.08 | 0.00 | 6.2 | 93.8 | 0.0 | -2.64 | 0.46 | 0.86 | 7.89 | 3.1 | 0.002 | 0.35 | 0.0 | 0.06 | 12.46 | 0.00 | 2.557 | 6.30 | 0.00 | 2.1 | 97.9 | 0.0 | -1.71 | 0.87 | 0.49 | 0.90 | 6.99 | 5562 | 342 | 27 | 0 | 18 | 0 | 2997 | logfile |
✔ | 7NCG | 12265 | 2023-12-09 | 2021-01-28 | 3.43 | 3.45 | 3.16 | 3.6 | 0.012 | 2.20 | 0.0 | 0.08 | 10.99 | 0.01 | 2.685 | 0.58 | 0.00 | 7.8 | 92.2 | 0.0 | -1.51 | 0.58 | 0.69 | 3.64 | 3.7 | 0.003 | 0.66 | 0.0 | 0.05 | 14.04 | 0.00 | 2.333 | 9.12 | 0.39 | 7.2 | 92.8 | 0.0 | -2.63 | 1.46 | 0.61 | 0.73 | 3.17 | 10428 | 732 | 12 | 0 | 0 | 0 | 5376 | logfile |
✔ | 7QL2 | 14061 | 2023-12-07 | 2021-12-19 | 2.95 | 2.96 | 2.65 | 3.1 | 0.010 | 2.11 | 2.0 | 0.11 | 10.98 | 0.01 | 2.674 | 0.00 | 0.00 | 7.6 | 92.4 | 0.0 | -2.82 | 0.30 | 0.74 | 4.50 | 3.4 | 0.003 | 0.56 | 0.0 | 0.05 | 12.48 | 0.00 | 2.544 | 1.75 | 1.48 | 8.3 | 91.7 | 0.0 | -3.02 | 0.82 | 0.22 | 0.71 | 4.19 | 2286 | 150 | 3 | 0 | 0 | 0 | 1179 | logfile |
✔ | 6QJH | 4563 | 2023-12-07 | 2019-01-24 | 3.3 | 3.70 | 2.77 | 3.6 | 0.012 | 1.21 | 3.0 | 0.10 | 14.39 | 0.01 | 2.673 | 1.49 | 1.96 | 7.0 | 93.0 | 0.0 | -3.22 | 0.36 | 0.83 | 2.97 | 3.6 | 0.003 | 0.65 | 0.0 | 0.05 | 15.68 | 0.00 | 2.258 | 4.48 | 0.00 | 2.3 | 97.7 | 0.0 | -2.63 | 1.57 | 0.30 | 0.77 | 2.79 | 1302 | 177 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8GZ9 | 34393 | 2023-12-07 | 2022-09-26 | 2.62 | 2.44 | 2.40 | 2.4 | 0.003 | 0.69 | 0.0 | 0.06 | 14.01 | 0.00 | 2.670 | 1.93 | 0.00 | 0.3 | 99.7 | 0.0 | -0.15 | 0.28 | 0.90 | 7.26 | 2.4 | 0.002 | 0.57 | 0.0 | 0.06 | 14.29 | 0.00 | 2.672 | 0.77 | 1.77 | 0.3 | 99.7 | 0.0 | -0.16 | 0.26 | 0.28 | 0.91 | 7.94 | 2426 | 390 | 58 | 0 | 0 | 24 | 0 | logfile |
✔ | 8CYR | 27082 | 2023-12-08 | 2022-05-24 | 4.2 | 3.54 | 3.92 | 4.0 | 0.003 | 0.62 | 0.0 | 0.05 | 8.97 | 0.00 | 2.654 | 0.08 | 2.00 | 4.4 | 95.6 | 0.0 | -2.37 | 0.46 | 0.55 | — | 4.0 | 0.004 | 0.75 | 0.0 | 0.05 | 11.88 | 0.00 | 2.099 | 11.78 | 0.00 | 7.5 | 92.5 | 0.0 | -3.23 | 2.73 | 0.53 | 0.68 | — | 5964 | 864 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QL1 | 14060 | 2023-12-07 | 2021-12-19 | 3.34 | 3.41 | 3.13 | 3.4 | 0.011 | 2.01 | 0.0 | 0.10 | 11.06 | 0.01 | 2.654 | 0.29 | 0.00 | 7.5 | 92.5 | 0.0 | -3.09 | 0.42 | 0.83 | 4.57 | 3.4 | 0.007 | 0.85 | 0.0 | 0.05 | 15.42 | 0.00 | 2.104 | 12.32 | 0.00 | 4.2 | 95.8 | 0.0 | -2.34 | 1.74 | 0.39 | 0.81 | 4.21 | 1671 | 219 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8P34 | 17383 | 2023-12-07 | 2023-05-17 | 2.61 | 2.80 | 2.24 | 2.8 | 0.009 | 1.32 | 0.0 | 0.08 | 11.05 | 0.01 | 2.651 | 0.69 | 0.00 | 5.4 | 94.6 | 0.0 | -1.84 | 0.29 | 0.90 | 7.34 | 2.8 | 0.002 | 0.50 | 0.0 | 0.05 | 13.21 | 0.00 | 2.693 | 0.69 | 0.00 | 4.3 | 95.7 | 0.0 | -1.63 | 0.36 | 0.28 | 0.88 | 6.21 | 711 | 94 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NCA | 12264 | 2023-12-09 | 2021-01-28 | 3.47 | 3.58 | 3.04 | 3.6 | 0.012 | 2.04 | 0.0 | 0.08 | 10.64 | 0.01 | 2.645 | 0.00 | 0.19 | 5.5 | 94.5 | 0.0 | -2.04 | 0.73 | 0.85 | 4.45 | 3.7 | 0.002 | 0.50 | 0.0 | 0.05 | 12.98 | 0.00 | 2.422 | 0.77 | 0.00 | 3.8 | 96.2 | 0.0 | -3.03 | 0.76 | 0.70 | 0.85 | 3.63 | 10428 | 732 | 12 | 0 | 0 | 0 | 5376 | logfile |
✔ | 6UUR | 20900 | 2023-12-07 | 2019-10-31 | 3.5 | 3.51 | — | 3.6 | 0.004 | 0.76 | 0.0 | 0.05 | 15.65 | 0.00 | 2.644 | 8.15 | 0.00 | 5.3 | 94.7 | 0.0 | -4.46 | 0.56 | 0.78 | 3.10 | 3.6 | 0.005 | 0.85 | 0.0 | 0.05 | 16.32 | 0.00 | 2.222 | 11.96 | 0.80 | 7.6 | 92.4 | 0.0 | -4.56 | 2.23 | 0.50 | 0.78 | 2.96 | 2770 | 400 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Q9M | 18286 | 2023-12-08 | 2023-08-20 | 2.65 | 2.53 | 2.47 | 2.7 | 0.011 | 1.76 | 0.0 | 0.09 | 11.56 | 0.01 | 2.640 | 0.28 | 0.00 | 1.8 | 98.2 | 0.0 | -1.02 | 0.33 | 0.79 | 6.36 | 2.6 | 0.004 | 0.54 | 0.0 | 0.05 | 17.87 | 0.00 | 2.347 | 1.42 | 0.25 | 0.9 | 99.1 | 0.0 | -1.59 | 1.46 | 0.41 | 0.90 | 6.06 | 7032 | 450 | 6 | 0 | 0 | 0 | 3588 | logfile |
✔ | 8CGG | 16642 | 2023-12-07 | 2023-02-04 | 2.5 | 2.67 | 2.48 | 2.7 | 0.011 | 1.67 | 0.0 | 0.08 | 16.62 | 0.01 | 2.637 | 6.41 | 0.00 | 11.5 | 88.5 | 0.0 | -5.62 | 0.55 | 0.94 | 8.29 | 2.7 | 0.004 | 0.86 | 0.0 | 0.04 | 16.89 | 0.00 | 2.615 | 1.17 | 0.00 | 4.9 | 95.1 | 0.0 | -4.89 | 1.33 | 0.50 | 0.92 | 7.55 | 2710 | 400 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CGH | 16643 | 2023-12-07 | 2023-02-04 | 2.68 | 2.73 | 2.52 | 2.7 | 0.011 | 1.54 | 0.0 | 0.08 | 16.67 | 0.01 | 2.629 | 3.30 | 0.00 | 5.1 | 92.3 | 2.6 | -5.57 | 0.54 | 0.94 | 7.81 | 2.7 | 0.003 | 0.79 | 0.0 | 0.04 | 17.32 | 0.00 | 2.650 | 0.97 | 0.00 | 5.4 | 94.6 | 0.0 | -4.92 | 0.93 | 0.53 | 0.92 | 6.30 | 2710 | 400 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HRF | 0260 | 2023-12-07 | 2018-09-26 | 3.3 | 3.38 | 2.95 | 3.5 | 0.016 | 1.25 | 0.0 | 0.09 | 13.68 | 0.01 | 2.627 | 7.82 | 0.00 | 13.3 | 86.7 | 0.0 | -4.08 | 0.38 | 0.74 | 2.93 | 3.5 | 0.005 | 0.84 | 0.0 | 0.05 | 16.52 | 0.00 | 2.196 | 8.66 | 0.50 | 6.9 | 93.1 | 0.0 | -3.41 | 3.56 | 0.37 | 0.78 | 3.67 | 3522 | 462 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8PPo | 17806 | 2023-12-07 | 2023-07-07 | 2.0 | 2.30 | 1.95 | 2.2 | 0.008 | 1.20 | 1.0 | 0.07 | 13.41 | 0.01 | 2.625 | 0.29 | 0.00 | 6.7 | 93.3 | 0.0 | 0.71 | 0.58 | 0.84 | 6.50 | 2.2 | 0.004 | 0.53 | 0.0 | 0.06 | 13.89 | 0.00 | 2.300 | 0.00 | 1.04 | 0.0 | 100.0 | 0.0 | 1.18 | 0.38 | 0.50 | 0.88 | 5.61 | 1696 | 240 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CG3 | 16628 | 2023-12-07 | 2023-02-03 | 2.39 | 2.55 | 2.34 | 2.5 | 0.012 | 1.69 | 0.0 | 0.08 | 14.77 | 0.01 | 2.619 | 1.73 | 0.00 | 2.3 | 97.7 | 0.0 | -4.90 | 0.52 | 0.96 | 8.23 | 2.5 | 0.004 | 0.84 | 0.0 | 0.04 | 16.20 | 0.00 | 2.636 | 0.69 | 0.71 | 1.8 | 98.2 | 0.0 | -4.73 | 0.32 | 0.51 | 0.94 | 7.39 | 3040 | 445 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8oL7 | 16953 | 2023-12-07 | 2023-03-30 | 3.0 | 3.28 | 2.45 | 3.4 | 0.006 | 0.81 | 0.0 | 0.07 | 13.04 | 0.00 | 2.619 | 10.11 | 0.00 | 3.3 | 96.7 | 0.0 | -2.92 | 0.50 | 0.79 | 5.15 | 3.4 | 0.006 | 0.75 | 0.0 | 0.06 | 15.85 | 0.00 | 2.444 | 13.55 | 0.00 | 7.7 | 92.3 | 0.0 | -2.76 | 0.96 | 0.44 | 0.81 | 5.70 | 2320 | 320 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6FU8 | 4319 | 2023-12-07 | 2018-02-26 | 3.2 | 4.43 | 2.98 | 3.8 | 0.013 | 2.11 | 2.0 | 0.10 | 20.18 | 0.02 | 2.617 | 1.47 | 2.78 | 11.2 | 86.2 | 2.5 | -3.87 | 0.17 | 0.42 | 2.23 | 4.1 | 0.003 | 0.76 | 0.0 | 0.04 | 15.76 | 0.00 | 2.243 | 15.40 | 0.00 | 10.0 | 88.8 | 1.2 | -1.46 | 2.97 | 0.22 | 0.61 | -0.89 | 1364 | 82 | 1 | 0 | 0 | 0 | 711 | logfile |
✔ | 8FF3 | 29037 | 2023-12-07 | 2022-12-07 | 3.09 | 2.31 | 2.69 | 3.2 | 0.002 | 0.43 | 0.0 | 0.06 | 8.70 | 0.00 | 2.616 | 1.83 | 0.00 | 0.0 | 100.0 | 0.0 | -2.15 | 0.40 | 0.67 | 4.94 | 3.2 | 0.002 | 0.49 | 0.0 | 0.05 | 11.42 | 0.00 | 2.240 | 6.87 | 0.00 | 1.4 | 98.6 | 0.0 | -2.14 | 0.47 | 0.36 | 0.72 | 4.33 | 2190 | 150 | 6 | 0 | 0 | 0 | 1122 | logfile |
✔ | 8B3A | 15824 | 2023-12-07 | 2022-09-16 | 3.8 | 3.66 | 2.91 | 4.1 | 0.122 | 1.89 | 0.0 | 0.10 | 27.06 | 0.09 | 2.613 | 1.89 | 0.00 | 0.0 | 100.0 | 0.0 | -4.71 | 0.55 | 0.64 | 5.18 | 4.1 | 0.078 | 6.51 | 29.0 | 0.43 | 19.99 | 0.05 | 1.652 | 313.51 | 3.81 | 47.3 | 8.0 | 44.7 | -10.72 | 2.68 | 0.43 | 0.58 | 2.94 | 2010 | 210 | 30 | 0 | 60 | 0 | 0 | logfile |