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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6WPS | 21864 | 2023-12-14 | 2020-04-27 | 3.1 | 3.36 | 3.25 | 3.3 | 0.013 | 1.34 | 0.0 | 0.09 | 9.99 | 0.01 | 2.364 | 0.29 | 0.10 | 2.4 | 97.6 | 0.0 | 0.67 | 0.73 | 0.74 | 3.01 | 3.3 | 0.003 | 0.61 | 0.0 | 0.04 | 13.93 | 0.00 | 2.087 | 7.01 | 0.17 | 3.2 | 96.8 | 0.0 | 0.16 | 1.66 | 0.77 | 0.81 | 2.83 | 28116 | 3540 | 27 | 0 | 75 | 0 | 0 | logfile |
✔ | 7SVW | 25455 | 2023-12-10 | 2021-11-19 | 3.69 | 3.57 | 3.59 | 3.5 | 0.012 | 1.46 | 9.0 | 0.07 | 20.29 | 0.02 | 0.955 | 14.70 | 2.78 | 4.0 | 95.8 | 0.3 | 0.11 | 0.78 | 0.72 | 2.09 | 3.5 | 0.003 | 0.61 | 0.0 | 0.04 | 21.70 | 0.00 | 2.063 | 7.20 | 0.08 | 3.9 | 96.1 | 0.0 | 1.29 | 1.56 | 0.82 | 0.80 | 1.89 | 15830 | 1484 | 12 | 190 | 2 | 0 | 0 | logfile |
✔ | 6WKN | 21705 | 2023-12-11 | 2020-04-16 | 3.46 | 3.36 | 3.47 | 3.3 | 0.007 | 0.74 | 0.0 | 0.04 | 15.69 | 0.01 | 2.264 | 6.06 | 4.53 | 4.0 | 96.0 | 0.0 | -2.93 | 0.78 | 0.81 | 2.98 | 3.3 | 0.002 | 0.52 | 0.0 | 0.04 | 16.76 | 0.00 | 2.177 | 8.21 | 0.05 | 2.9 | 97.1 | 0.0 | 1.34 | 0.63 | 0.79 | 0.82 | 2.68 | 19320 | 2424 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 7S3i | 24825 | 2023-12-08 | 2021-09-07 | 2.51 | 2.95 | 2.29 | 2.8 | 0.002 | 0.44 | 0.0 | 0.04 | 13.63 | 0.00 | 2.088 | 5.73 | 0.00 | 2.1 | 97.9 | 0.0 | 1.36 | 0.80 | 0.87 | 3.90 | 2.8 | 0.003 | 0.50 | 0.0 | 0.04 | 16.13 | 0.00 | 2.094 | 5.73 | 1.15 | 1.8 | 98.2 | 0.0 | 1.82 | 0.93 | 0.76 | 0.88 | 3.50 | 8094 | 1023 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WUJ | 32837 | 2023-12-08 | 2022-02-08 | 3.3 | 3.09 | — | 3.1 | 0.007 | 1.00 | 0.0 | 0.06 | 13.92 | 0.01 | 2.219 | 18.92 | 0.51 | 7.1 | 92.9 | 0.0 | -4.30 | 0.58 | 0.72 | 2.43 | 3.2 | 0.004 | 0.68 | 0.0 | 0.04 | 15.25 | 0.00 | 2.050 | 21.05 | 0.77 | 5.9 | 94.1 | 0.0 | -1.19 | 1.59 | 0.57 | 0.73 | 1.59 | 8600 | 1209 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WHD | 32499 | 2023-12-16 | 2021-12-30 | 2.65 | 3.19 | — | 3.9 | 0.006 | 0.71 | 0.0 | 0.05 | 14.15 | 0.00 | 1.554 | 11.40 | 0.93 | 9.1 | 90.8 | 0.1 | -1.88 | 0.61 | 0.35 | 0.03 | 3.1 | 0.004 | 0.90 | 0.0 | 0.05 | 16.40 | 0.01 | 2.108 | 13.68 | 2.96 | 7.7 | 92.3 | 0.0 | -1.66 | 1.57 | 0.85 | 0.82 | 1.95 | 34209 | 4331 | 29 | 0 | 54 | 0 | 0 | logfile |
✔ | 7MR0 | 23952 | 2023-12-11 | 2021-05-07 | 3.7 | 4.10 | — | 4.0 | 0.003 | 0.81 | 0.0 | 0.05 | 15.13 | 0.01 | 2.284 | 4.14 | 0.44 | 5.8 | 94.2 | 0.0 | -1.82 | 0.84 | 0.82 | 1.66 | 4.0 | 0.005 | 0.66 | 0.0 | 0.04 | 16.44 | 0.00 | 2.174 | 9.21 | 0.29 | 7.5 | 92.5 | 0.0 | -0.46 | 0.36 | 0.85 | 0.84 | 1.84 | 19282 | 2400 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7X06 | 32918 | 2023-12-10 | 2022-02-21 | 3.1 | 3.31 | — | 3.2 | 0.003 | 0.51 | 0.0 | 0.04 | 10.34 | 0.00 | 2.215 | 3.96 | 0.43 | 4.1 | 95.9 | 0.0 | 2.06 | 0.66 | 0.82 | 2.47 | 3.3 | 0.004 | 0.56 | 0.0 | 0.04 | 14.63 | 0.00 | 2.214 | 5.56 | 0.14 | 6.5 | 93.5 | 0.0 | 1.52 | 1.17 | 0.66 | 0.84 | 2.20 | 12964 | 1608 | 4 | 2 | 2 | 0 | 0 | logfile |
✔ | 7TMM | 25996 | 2023-12-16 | 2022-01-19 | 3.5 | 3.65 | — | 3.6 | 0.005 | 0.54 | 0.0 | 0.04 | 11.40 | 0.00 | 2.195 | 7.40 | 0.04 | 3.8 | 96.2 | 0.0 | 1.51 | 0.82 | 0.84 | 3.00 | 3.6 | 0.003 | 0.52 | 0.0 | 0.04 | 12.91 | 0.00 | 2.136 | 7.19 | 0.36 | 3.4 | 96.6 | 0.0 | 1.56 | 1.06 | 0.82 | 0.84 | 2.55 | 33713 | 5236 | 17 | 0 | 1 | 0 | 0 | logfile |
✔ | 7W84 | 32351 | 2023-12-10 | 2021-12-07 | 3.4 | 2.66 | — | 3.4 | 0.004 | 0.74 | 1.0 | 0.05 | 16.68 | 0.00 | 1.982 | 18.13 | 7.85 | 12.9 | 87.0 | 0.1 | -3.60 | 0.79 | 0.78 | 1.21 | 3.5 | 0.004 | 0.88 | 0.0 | 0.05 | 17.57 | 0.00 | 2.037 | 21.38 | 1.17 | 12.3 | 87.7 | 0.0 | -2.02 | 0.86 | 0.80 | 0.79 | 1.37 | 7879 | 995 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UNA | 26618 | 2023-12-11 | 2022-04-09 | 4.0 | 3.57 | 3.79 | 3.8 | 0.020 | 0.86 | 0.0 | 0.04 | 15.47 | 0.01 | 1.980 | 13.79 | 0.00 | 7.1 | 92.9 | 0.0 | -0.95 | 0.55 | 0.71 | — | 3.8 | 0.004 | 0.62 | 0.0 | 0.04 | 15.89 | 0.00 | 1.963 | 16.38 | 0.79 | 7.4 | 92.6 | 0.0 | -0.37 | 0.60 | 0.56 | 0.75 | — | 18414 | 1132 | 12 | 0 | 4 | 0 | 9203 | logfile |
✔ | 7R6L | 24281 | 2023-12-08 | 2021-06-22 | 2.85 | 3.04 | — | 3.0 | 0.008 | 0.89 | 0.0 | 0.05 | 23.95 | 0.01 | 1.985 | 4.24 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.67 | 0.86 | — | 3.0 | 0.006 | 0.73 | 0.0 | 0.04 | 23.54 | 0.01 | 1.878 | 7.46 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.09 | 0.62 | 0.86 | — | 7857 | 0 | 3 | 366 | 20 | 0 | 0 | logfile |
✔ | 7V1Z | 31631 | 2023-12-09 | 2021-08-07 | 2.98 | 3.07 | — | 3.1 | 0.003 | 0.58 | 0.0 | 0.05 | 13.83 | 0.00 | 2.207 | 3.78 | 0.22 | 2.9 | 97.1 | 0.0 | 1.19 | 0.66 | 0.82 | 2.96 | 3.0 | 0.002 | 0.54 | 0.0 | 0.04 | 16.33 | 0.00 | 2.193 | 4.70 | 1.71 | 2.8 | 97.2 | 0.0 | 1.43 | 0.60 | 0.69 | 0.86 | 2.23 | 12588 | 1592 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8HiL | 34820 | 2023-12-12 | 2022-11-20 | 3.57 | 3.29 | 3.64 | 3.2 | 0.007 | 1.12 | 0.0 | 0.06 | 11.20 | 0.01 | 2.105 | 6.12 | 1.12 | 13.3 | 86.4 | 0.3 | -4.62 | 0.82 | 0.79 | 2.26 | 3.1 | 0.003 | 0.67 | 0.0 | 0.04 | 14.51 | 0.00 | 1.728 | 10.27 | 0.04 | 11.7 | 88.3 | 0.0 | -1.91 | 1.26 | 0.83 | 0.79 | 1.59 | 23134 | 2914 | 15 | 0 | 7 | 0 | 0 | logfile |
✔ | 6UEN | 20754 | 2023-12-10 | 2019-09-22 | 3.67 | 3.75 | — | 3.7 | 0.006 | 0.65 | 0.0 | 0.04 | 14.23 | 0.00 | 2.112 | 9.04 | 0.13 | 4.6 | 95.4 | 0.0 | -2.28 | 0.73 | 0.83 | 1.86 | 3.7 | 0.002 | 0.59 | 0.0 | 0.04 | 16.38 | 0.00 | 2.180 | 8.61 | 0.39 | 3.7 | 96.3 | 0.0 | 1.03 | 0.54 | 0.72 | 0.81 | 1.29 | 13705 | 1696 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ELB | 31179 | 2023-12-15 | 2021-04-09 | 4.1 | 4.43 | — | 4.1 | 0.002 | 0.59 | 0.0 | 0.04 | 13.34 | 0.00 | 2.021 | 9.17 | 2.07 | 8.6 | 91.4 | 0.0 | -3.36 | 0.80 | 0.69 | — | 4.1 | 0.003 | 0.76 | 0.0 | 0.04 | 13.20 | 0.00 | 2.129 | 14.44 | 0.03 | 9.4 | 90.5 | 0.0 | -1.36 | 1.50 | 0.83 | 0.74 | — | 31012 | 3972 | 8 | 0 | 10 | 0 | 0 | logfile |
✔ | 6M16 | 30038 | 2023-12-13 | 2020-02-24 | 2.83 | 2.92 | — | 2.9 | 0.011 | 1.07 | 0.0 | 0.07 | 11.54 | 0.01 | 1.146 | 5.17 | 0.36 | 7.5 | 92.4 | 0.1 | -4.10 | 0.79 | 0.85 | 3.94 | 2.9 | 0.006 | 0.71 | 0.0 | 0.05 | 13.29 | 0.00 | 2.217 | 7.47 | 2.20 | 6.4 | 93.6 | 0.0 | -1.07 | 1.17 | 0.80 | 0.87 | 3.14 | 23433 | 2895 | 18 | 0 | 60 | 0 | 0 | logfile |
✔ | 6NN6 | 0458 | 2023-12-10 | 2019-01-14 | 3.9 | 3.97 | — | 3.8 | 0.010 | 1.02 | 0.0 | 0.05 | 25.94 | 0.01 | 2.144 | 9.01 | 0.81 | 3.8 | 96.0 | 0.2 | -5.04 | 0.83 | 0.80 | 2.90 | 3.8 | 0.004 | 0.66 | 0.0 | 0.04 | 26.52 | 0.00 | 2.089 | 12.17 | 0.61 | 2.8 | 97.2 | 0.0 | -0.01 | 1.76 | 0.83 | 0.79 | 1.34 | 15125 | 1149 | 12 | 290 | 0 | 0 | 0 | logfile |
✔ | 7P1H | 13159 | 2023-12-10 | 2021-07-01 | 3.9 | 4.12 | — | 3.9 | 0.005 | 1.01 | 0.0 | 0.05 | 14.38 | 0.01 | 2.016 | 12.38 | 0.00 | 5.7 | 94.3 | 0.0 | -1.60 | 0.81 | 0.60 | 0.33 | 3.8 | 0.003 | 0.65 | 0.0 | 0.04 | 15.76 | 0.00 | 1.872 | 14.46 | 0.26 | 6.4 | 93.6 | 0.0 | -0.81 | 1.68 | 0.86 | 0.74 | 1.06 | 13957 | 898 | 4 | 0 | 2 | 0 | 6917 | logfile |
✔ | 6PWW | 20513 | 2023-12-16 | 2019-07-23 | 4.4 | 5.49 | — | 4.5 | 0.004 | 0.64 | 0.0 | 0.04 | 25.78 | 0.00 | 1.996 | 21.91 | 1.22 | 4.5 | 95.5 | 0.0 | -2.62 | 0.92 | 0.84 | — | 4.5 | 0.004 | 0.69 | 0.0 | 0.04 | 25.21 | 0.00 | 2.039 | 23.78 | 0.00 | 5.0 | 95.0 | 0.0 | -1.06 | 0.68 | 0.92 | 0.85 | — | 18174 | 1550 | 14 | 292 | 1 | 0 | 0 | logfile |