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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7N9Q | 24259 | 2023-12-08 | 2021-06-18 | 4.6 | 4.92 | — | 2.3 | 0.002 | 0.88 | 0.0 | 0.00 | 5.65 | 0.00 | 2.600 | 0.00 | 0.00 | 8.9 | 90.3 | 0.8 | -1.59 | 0.79 | 0.69 | — | 2.5 | 0.003 | 1.00 | 0.0 | 0.00 | 5.05 | 0.00 | 2.580 | 6.76 | 0.00 | 12.3 | 86.7 | 0.9 | -4.51 | 2.40 | 0.85 | 0.81 | — | 6945 | 2315 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 3JBS | 6478 | 2023-12-07 | 2015-10-13 | 2.9 | 3.04 | — | 3.2 | 0.010 | 1.32 | 0.0 | 0.06 | 8.67 | 0.01 | 2.510 | 0.00 | 0.00 | 2.9 | 97.1 | 0.0 | 0.51 | 0.21 | 0.76 | 4.15 | 3.0 | 0.003 | 0.61 | 0.0 | 0.04 | 18.11 | 0.00 | 2.225 | 5.17 | 3.95 | 1.7 | 98.3 | 0.0 | 0.99 | 1.75 | 0.21 | 0.81 | 3.63 | 1401 | 175 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JSE | 22451 | 2023-12-10 | 2020-08-14 | 4.6 | 5.13 | — | 4.2 | 0.001 | 0.38 | 0.0 | 0.02 | 10.51 | 0.00 | 2.425 | 0.00 | 0.00 | 11.4 | 88.0 | 0.6 | -2.68 | 0.79 | 0.50 | — | 3.9 | 0.007 | 1.10 | 0.0 | 0.09 | 14.86 | 0.00 | 2.156 | 11.87 | 0.00 | 20.1 | 79.9 | 0.0 | -3.21 | 2.77 | 0.87 | 0.64 | — | 13288 | 3168 | 24 | 32 | 0 | 0 | 0 | logfile |
✔ | 8KB5 | 37070 | 2023-12-09 | 2023-08-03 | 2.26133 | 2.35 | 2.23 | 2.3 | 0.007 | 0.98 | 0.0 | 0.05 | 28.08 | 0.01 | 2.377 | 0.00 | 0.00 | 0.7 | 99.3 | 0.0 | 2.15 | 0.79 | 0.85 | 3.73 | 2.3 | 0.005 | 0.62 | 0.0 | 0.04 | 28.37 | 0.01 | 2.292 | 3.58 | 0.96 | 1.1 | 98.9 | 0.0 | 2.65 | 0.24 | 0.78 | 0.85 | 3.78 | 11953 | 758 | 10 | 290 | 0 | 0 | 0 | logfile |
✔ | 7JSH | 22454 | 2023-12-08 | 2020-08-14 | 4.4 | 7.07 | — | 17.0 | 0.001 | 0.20 | 0.0 | 0.02 | 8.81 | 0.00 | 2.581 | 0.00 | 0.00 | 13.1 | 83.7 | 3.2 | -3.27 | 0.49 | 0.25 | — | 5.3 | 0.005 | 1.30 | 0.0 | 0.05 | 13.69 | 0.01 | 1.942 | 27.17 | 0.00 | 31.8 | 67.9 | 0.3 | -5.48 | 6.11 | 0.73 | 0.61 | — | 7916 | 1904 | 8 | 15 | 0 | 0 | 0 | logfile |
✔ | 6WX6 | 21951 | 2023-12-11 | 2020-05-09 | 2.0 | 2.11 | 2.08 | 2.1 | 0.006 | 0.69 | 0.0 | 0.04 | 14.94 | 0.00 | 2.277 | 0.00 | 0.00 | 1.2 | 98.8 | 0.0 | 1.60 | 0.77 | 0.88 | 7.70 | 2.1 | 0.003 | 0.53 | 0.0 | 0.03 | 16.12 | 0.00 | 2.010 | 2.94 | 0.69 | 1.2 | 98.8 | 0.0 | 4.69 | 0.55 | 0.79 | 0.90 | 7.38 | 68332 | 4128 | 56 | 0 | 8 | 2420 | 32664 | logfile |
✔ | 8Q8D | 18251 | 2023-12-08 | 2023-08-18 | 3.04 | 2.88 | 2.87 | 3.0 | 0.011 | 1.85 | 2.0 | 0.08 | 13.26 | 0.01 | 2.504 | 0.00 | 0.00 | 2.9 | 97.1 | 0.0 | -1.65 | 0.32 | 0.75 | 5.97 | 3.0 | 0.004 | 0.56 | 0.0 | 0.05 | 16.36 | 0.00 | 2.218 | 1.56 | 0.25 | 1.6 | 98.4 | 0.0 | -1.36 | 1.65 | 0.39 | 0.87 | 6.13 | 7074 | 456 | 6 | 0 | 0 | 0 | 3606 | logfile |
✔ | 7QL0 | 14059 | 2023-12-08 | 2021-12-19 | 3.13 | 2.96 | 2.97 | 3.1 | 0.011 | 1.87 | 0.0 | 0.09 | 12.06 | 0.01 | 2.510 | 0.00 | 0.00 | 4.0 | 96.0 | 0.0 | -2.04 | 0.39 | 0.77 | 6.02 | 3.2 | 0.002 | 0.58 | 0.0 | 0.05 | 14.10 | 0.00 | 2.116 | 5.95 | 0.00 | 0.5 | 99.5 | 0.0 | -1.68 | 1.65 | 0.41 | 0.84 | 5.97 | 6390 | 414 | 6 | 0 | 0 | 0 | 3258 | logfile |
✔ | 7TPA | 26050 | 2023-12-13 | 2022-01-25 | 3.6 | 3.99 | — | 3.6 | 0.013 | 1.75 | 3.0 | 0.10 | 12.53 | 0.01 | 2.510 | 0.00 | 1.11 | 6.5 | 92.8 | 0.8 | -1.19 | 0.84 | 0.85 | 2.96 | 3.6 | 0.005 | 0.63 | 0.0 | 0.04 | 12.78 | 0.00 | 2.091 | 4.83 | 0.26 | 4.6 | 95.2 | 0.2 | 0.34 | 0.48 | 0.84 | 0.84 | 2.51 | 23199 | 2983 | 18 | 0 | 58 | 0 | 0 | logfile |
✔ | 7JG7 | 22313 | 2023-12-11 | 2020-07-18 | 3.5 | 2.41 | 3.57 | 3.4 | 0.008 | 1.54 | 0.0 | 0.00 | 6.82 | 0.01 | 2.433 | 0.00 | 0.00 | 2.9 | 96.9 | 0.1 | -0.73 | 0.63 | 0.55 | — | 2.3 | 0.006 | 1.16 | 0.0 | 0.00 | 7.34 | 0.01 | 2.119 | 4.50 | 0.00 | 14.7 | 85.1 | 0.1 | -2.00 | 1.65 | 0.74 | 0.72 | — | 19316 | 4818 | 20 | 0 | 11 | 0 | 0 | logfile |
✔ | 8Q9i | 18282 | 2023-12-07 | 2023-08-20 | 2.56 | 2.01 | 2.38 | 2.2 | 0.011 | 1.80 | 0.0 | 0.08 | 11.44 | 0.01 | 2.520 | 0.00 | 0.00 | 3.8 | 96.2 | 0.0 | -1.34 | 0.29 | 0.75 | 7.51 | 2.3 | 0.003 | 0.56 | 0.0 | 0.05 | 17.42 | 0.00 | 2.228 | 1.76 | 0.00 | 0.5 | 99.5 | 0.0 | -1.46 | 4.60 | 0.38 | 0.87 | 7.68 | 3411 | 219 | 3 | 0 | 0 | 0 | 1740 | logfile |
✔ | 7QKi | 14043 | 2023-12-08 | 2021-12-17 | 3.13 | 3.29 | 3.04 | 3.2 | 0.011 | 1.99 | 3.0 | 0.10 | 9.18 | 0.01 | 2.508 | 0.00 | 0.00 | 10.1 | 89.9 | 0.0 | -1.50 | 0.41 | 0.79 | 6.28 | 3.3 | 0.003 | 0.60 | 0.0 | 0.05 | 12.04 | 0.00 | 2.098 | 5.09 | 0.00 | 4.7 | 95.3 | 0.0 | -1.88 | 0.76 | 0.39 | 0.80 | 5.64 | 7074 | 456 | 6 | 0 | 0 | 0 | 3606 | logfile |
✔ | 7JG6 | 22312 | 2023-12-11 | 2020-07-18 | 3.7 | 2.39 | 3.79 | 2.2 | 0.008 | 1.40 | 0.0 | 0.00 | 6.55 | 0.01 | 2.433 | 0.00 | 0.00 | 2.9 | 97.0 | 0.1 | -0.59 | 0.62 | 0.54 | — | 2.3 | 0.004 | 0.90 | 0.0 | 0.00 | 5.83 | 0.00 | 2.226 | 1.17 | 0.00 | 11.4 | 88.6 | 0.0 | -0.80 | 1.65 | 0.71 | 0.69 | — | 19320 | 4819 | 20 | 0 | 11 | 0 | 0 | logfile |
✔ | 7ADM | 11731 | 2023-12-09 | 2020-09-15 | 3.5 | 3.77 | 3.57 | 3.8 | 0.013 | 1.98 | 3.0 | 0.11 | 15.37 | 0.02 | 2.582 | 0.00 | 0.73 | 11.9 | 88.1 | 0.0 | -2.91 | 0.49 | 0.70 | 2.46 | 3.8 | 0.003 | 0.64 | 0.0 | 0.04 | 16.54 | 0.00 | 1.935 | 10.80 | 0.37 | 10.0 | 90.0 | 0.0 | -1.89 | 0.93 | 0.49 | 0.70 | 2.41 | 9726 | 614 | 1 | 0 | 0 | 0 | 4799 | logfile |
✔ | 8oRE | 17121 | 2023-12-07 | 2023-04-13 | 2.5 | 2.67 | 2.44 | 2.7 | 0.011 | 2.09 | 7.0 | 0.14 | 10.93 | 0.01 | 2.570 | 0.00 | 0.00 | 8.0 | 92.0 | 0.0 | -2.10 | 0.32 | 0.74 | 5.29 | 2.7 | 0.003 | 0.66 | 0.0 | 0.05 | 17.31 | 0.00 | 2.204 | 2.77 | 2.49 | 6.7 | 93.3 | 0.0 | -1.75 | 3.47 | 0.37 | 0.81 | 4.54 | 3615 | 231 | 3 | 0 | 0 | 0 | 1845 | logfile |
✔ | 7QKW | 14055 | 2023-12-07 | 2021-12-19 | 2.32 | 1.74 | 2.60 | 2.3 | 0.010 | 1.93 | 1.0 | 0.10 | 13.53 | 0.01 | 2.534 | 0.00 | 0.00 | 5.4 | 94.6 | 0.0 | -2.79 | 0.41 | 0.81 | 7.02 | 2.3 | 0.003 | 0.54 | 0.0 | 0.05 | 16.64 | 0.00 | 2.487 | 3.40 | 2.17 | 3.7 | 96.3 | 0.0 | -2.92 | 1.37 | 0.41 | 0.85 | 6.06 | 4707 | 306 | 6 | 0 | 0 | 0 | 2439 | logfile |
✔ | 7QVF | 14176 | 2023-12-08 | 2022-01-21 | 3.64 | 3.54 | 3.42 | 4.1 | 0.012 | 2.10 | 22.0 | 0.12 | 15.51 | 0.01 | 2.525 | 0.00 | 0.53 | 6.0 | 94.0 | 0.0 | -2.41 | 0.43 | 0.77 | 3.90 | 3.6 | 0.005 | 0.87 | 0.0 | 0.06 | 16.80 | 0.00 | 2.168 | 16.59 | 1.19 | 6.6 | 93.4 | 0.0 | -2.44 | 3.86 | 0.40 | 0.75 | 3.27 | 6516 | 810 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6CoZ | 7545 | 2023-12-07 | 2018-03-13 | 3.36 | 4.78 | — | 4.7 | 0.009 | 1.71 | 0.0 | 0.07 | 5.63 | 0.01 | 2.541 | 0.00 | 0.00 | 3.2 | 96.2 | 0.6 | -2.49 | 0.78 | 0.68 | — | 4.4 | 0.003 | 0.85 | 0.0 | 0.04 | 5.41 | 0.00 | 2.334 | 6.19 | 0.00 | 9.6 | 90.4 | 0.0 | -1.73 | 1.59 | 0.82 | 0.77 | — | 1586 | 320 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NCH | 12266 | 2023-12-09 | 2021-01-28 | 3.84 | 3.76 | 3.69 | 3.8 | 0.013 | 1.61 | 2.0 | 0.10 | 14.68 | 0.00 | 2.485 | 0.00 | 0.19 | 9.4 | 90.6 | 0.0 | -3.70 | 0.60 | 0.45 | 2.36 | 3.8 | 0.003 | 0.73 | 2.0 | 0.05 | 15.61 | 0.00 | 1.927 | 11.18 | 0.19 | 14.2 | 85.8 | 0.0 | -4.48 | 1.66 | 0.65 | 0.53 | 2.28 | 11292 | 816 | 12 | 0 | 0 | 0 | 5796 | logfile |
✔ | 7QJY | 14026 | 2023-12-07 | 2021-12-17 | 3.14 | 2.93 | 3.08 | 3.1 | 0.011 | 1.87 | 0.0 | 0.09 | 12.32 | 0.01 | 2.519 | 0.00 | 0.25 | 5.7 | 94.3 | 0.0 | -2.50 | 0.38 | 0.82 | 5.27 | 3.1 | 0.007 | 0.81 | 0.0 | 0.05 | 17.02 | 0.00 | 2.151 | 8.68 | 0.76 | 2.3 | 97.7 | 0.0 | -2.24 | 3.43 | 0.35 | 0.83 | 4.41 | 3444 | 450 | 6 | 0 | 0 | 0 | 0 | logfile |