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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 4V91 | 2599 | 2023-12-11 | 2014-03-21 | 3.7 | 3.84 | — | 3.8 | 0.133 | 4.77 | 525.0 | 0.43 | 24.78 | 0.07 | 0.695 | 17.94 | 12.79 | 14.1 | 78.2 | 7.8 | -5.39 | 0.33 | 0.36 | 0.15 | 3.8 | 0.036 | 1.48 | 0.0 | 0.04 | 22.24 | 0.02 | 2.008 | 17.16 | 1.21 | 8.6 | 90.7 | 0.7 | -2.77 | 2.00 | 0.62 | 0.81 | 1.39 | 125665 | 6450 | 45 | 3482 | 0 | 0 | 0 | logfile |
✔ | 3J1B | 5391 | 2023-12-09 | 2012-02-06 | 4.9 | 5.01 | — | 4.8 | 0.034 | 3.60 | 502.0 | 0.21 | 17.58 | 0.03 | 2.352 | 1.73 | 4.08 | 6.4 | 90.1 | 3.5 | -3.28 | 0.67 | 0.51 | — | 4.8 | 0.003 | 0.79 | 0.0 | 0.05 | 14.59 | 0.01 | 2.170 | 16.48 | 0.00 | 4.4 | 95.0 | 0.6 | 0.64 | 2.25 | 0.79 | 0.70 | — | 62992 | 8304 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J06 | 5185 | 2023-12-09 | 2011-04-26 | 3.3 | 2.88 | — | 3.5 | 0.011 | 2.34 | 441.0 | 0.15 | 21.41 | 0.01 | 1.607 | 79.64 | 14.71 | 21.1 | 65.4 | 13.5 | -7.24 | 0.56 | 0.80 | 1.90 | 3.0 | 0.004 | 0.92 | 0.0 | 0.04 | 20.79 | 0.01 | 2.088 | 17.33 | 1.28 | 8.8 | 89.8 | 1.5 | -2.84 | 1.27 | 0.55 | 0.79 | 2.18 | 62916 | 7595 | 98 | 147 | 0 | 0 | 0 | logfile |
✔ | 6GH5 | 0001 | 2023-12-14 | 2018-05-04 | 3.4 | 3.71 | — | 3.4 | 0.033 | 3.30 | 333.0 | 0.22 | 17.39 | 0.02 | 1.847 | 24.49 | 4.29 | 11.0 | 86.7 | 2.3 | -4.34 | 0.89 | 0.88 | 2.50 | 3.4 | 0.004 | 0.83 | 1.0 | 0.04 | 18.27 | 0.00 | 2.103 | 12.88 | 0.31 | 9.2 | 89.8 | 1.0 | -0.89 | 1.33 | 0.88 | 0.86 | 1.68 | 28316 | 3593 | 8 | 92 | 50 | 0 | 0 | logfile |
✔ | 5G06 | 3366 | 2023-12-14 | 2016-03-17 | 4.2 | 4.89 | — | 4.7 | 0.036 | 3.53 | 246.0 | 0.21 | 17.03 | 0.03 | 1.189 | 3.05 | 3.01 | 5.9 | 92.3 | 1.9 | -2.39 | 0.66 | 0.46 | — | 4.7 | 0.003 | 0.75 | 0.0 | 0.04 | 14.36 | 0.00 | 2.082 | 17.81 | 0.00 | 4.2 | 95.6 | 0.1 | -0.48 | 1.80 | 0.88 | 0.79 | — | 26794 | 3420 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 3LoS | 5137 | 2023-12-09 | 2010-02-04 | 4.3 | 2.98 | — | 3.0 | 0.008 | 2.44 | 224.0 | 0.19 | 19.87 | 0.01 | 2.259 | 87.93 | 23.89 | 17.4 | 68.9 | 13.8 | -6.57 | 0.57 | 0.49 | — | 3.2 | 0.004 | 1.16 | 0.0 | 0.05 | 15.91 | 0.01 | 2.171 | 27.07 | 0.03 | 20.2 | 75.7 | 4.1 | -4.25 | 1.37 | 0.62 | 0.54 | — | 63712 | 8512 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 5J8V | 8073 | 2023-12-12 | 2016-04-08 | 4.9 | 4.81 | — | 4.7 | 0.024 | 2.67 | 214.0 | 0.16 | 10.17 | 0.01 | 1.145 | 73.68 | 28.71 | 6.2 | 86.5 | 7.3 | 2.50 | 0.71 | 0.67 | — | 4.7 | 0.003 | 0.96 | 4.0 | 0.04 | 9.37 | 0.00 | 2.173 | 6.74 | 0.32 | 9.5 | 88.8 | 1.7 | 0.19 | 0.81 | 0.75 | 0.74 | — | 73616 | 13812 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HE7 | 0211 | 2023-12-13 | 2018-08-20 | 3.69 | 3.80 | — | 3.8 | 0.039 | 3.60 | 213.0 | 0.21 | 17.65 | 0.03 | 2.081 | 3.03 | 4.93 | 5.6 | 92.9 | 1.6 | -2.44 | 0.64 | 0.70 | 2.28 | 3.8 | 0.012 | 0.75 | 0.0 | 0.05 | 17.37 | 0.00 | 1.905 | 11.76 | 0.39 | 2.9 | 97.1 | 0.0 | 0.06 | 0.91 | 0.62 | 0.78 | 1.56 | 23821 | 3059 | 14 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PBX | 13308 | 2023-12-08 | 2021-08-02 | 3.43 | 3.70 | 3.43 | 3.1 | 0.032 | 2.53 | 206.0 | 0.21 | 19.43 | 0.02 | 0.597 | 32.75 | 11.71 | 3.1 | 95.3 | 1.6 | 1.29 | 0.69 | 0.65 | 1.83 | 3.2 | 0.004 | 0.77 | 0.0 | 0.05 | 17.15 | 0.00 | 1.823 | 14.67 | 0.32 | 4.7 | 95.3 | 0.1 | 1.26 | 1.42 | 0.90 | 0.87 | 2.10 | 59472 | 8015 | 35 | 0 | 28 | 0 | 0 | logfile |
✔ | 6ET5 | 3951 | 2023-12-15 | 2017-10-25 | 2.87 | 4.09 | 3.11 | 3.5 | 0.025 | 2.86 | 202.0 | 0.21 | 21.89 | 0.03 | 1.592 | 33.46 | 8.13 | 12.2 | 83.7 | 4.1 | -5.05 | 0.80 | 0.85 | 3.34 | 3.5 | 0.004 | 1.01 | 0.0 | 0.05 | 18.86 | 0.00 | 2.052 | 14.93 | 1.57 | 8.6 | 91.2 | 0.3 | -0.24 | 1.32 | 0.79 | 0.85 | 3.04 | 31994 | 3492 | 92 | 0 | 75 | 0 | 0 | logfile |
✔ | 7TDD | 25825 | 2023-12-12 | 2021-12-30 | 3.5 | 2.37 | 2.70 | 2.8 | 0.029 | 2.07 | 183.0 | 0.29 | 12.65 | 0.01 | 2.192 | 1.90 | 0.55 | 1.5 | 98.4 | 0.1 | -0.52 | 0.67 | 0.64 | 2.40 | 2.1 | 0.005 | 0.61 | 0.0 | 0.04 | 15.69 | 0.00 | 1.951 | 8.43 | 0.46 | 2.5 | 97.4 | 0.1 | 2.00 | 3.04 | 0.67 | 0.68 | 2.54 | 20031 | 1211 | 2 | 0 | 0 | 0 | 10025 | logfile |
✔ | 6HE5 | 0210 | 2023-12-13 | 2018-08-20 | 4.12 | 4.16 | — | 4.2 | 0.036 | 3.51 | 183.0 | 0.20 | 17.65 | 0.03 | 2.236 | 2.09 | 4.51 | 5.3 | 92.5 | 2.2 | -2.68 | 0.54 | 0.60 | — | 4.1 | 0.005 | 0.88 | 0.0 | 0.05 | 14.49 | 0.00 | 2.074 | 22.24 | 0.00 | 4.4 | 95.4 | 0.2 | -0.85 | 1.76 | 0.58 | 0.76 | — | 24633 | 3162 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 5G04 | 3385 | 2023-12-09 | 2016-03-16 | 3.9 | 3.86 | — | 3.8 | 0.019 | 1.88 | 181.0 | 0.13 | 19.17 | 0.01 | 1.629 | 17.65 | 13.63 | 6.3 | 91.5 | 2.2 | -2.36 | 0.78 | 0.65 | 0.91 | 3.8 | 0.008 | 0.89 | 0.0 | 0.04 | 18.07 | 0.00 | 2.003 | 19.55 | 0.83 | 5.9 | 93.5 | 0.6 | 0.04 | 1.74 | 0.84 | 0.77 | 0.67 | 65481 | 8322 | 22 | 0 | 3 | 0 | 0 | logfile |
✔ | 8GRN | 34209 | 2023-12-09 | 2022-09-02 | 2.5 | 3.22 | 2.91 | 3.2 | 0.033 | 3.22 | 177.0 | 0.26 | 23.95 | 0.02 | 1.568 | 20.38 | 36.57 | 14.8 | 77.8 | 7.4 | -5.62 | 0.54 | 0.70 | 2.38 | 3.2 | 0.004 | 0.83 | 0.0 | 0.05 | 19.31 | 0.01 | 1.940 | 9.44 | 3.96 | 9.7 | 89.7 | 0.6 | -0.17 | 1.25 | 0.44 | 0.71 | 2.57 | 11602 | 1432 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 4V1W | 2788 | 2023-12-15 | 2014-10-02 | 4.7 | 4.69 | — | 4.7 | 0.020 | 2.45 | 172.0 | 0.17 | 18.97 | 0.01 | 2.533 | 7.94 | 7.67 | 3.0 | 96.5 | 0.6 | -2.40 | 0.74 | 0.84 | — | 4.6 | 0.004 | 0.91 | 0.0 | 0.04 | 16.60 | 0.01 | 2.039 | 20.50 | 0.00 | 2.4 | 97.6 | 0.0 | 0.57 | 2.81 | 0.73 | 0.76 | — | 32736 | 4080 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 8H40 | 34476 | 2023-12-16 | 2022-10-09 | 3.6 | 4.14 | 3.56 | 3.3 | 0.059 | 3.51 | 163.0 | 0.18 | 20.66 | 0.02 | 0.727 | 175.67 | 4.55 | 35.8 | 60.4 | 3.8 | -7.43 | 0.85 | 0.79 | 0.76 | 3.3 | 0.004 | 0.92 | 0.0 | 0.05 | 20.67 | 0.01 | 1.897 | 21.40 | 0.48 | 12.1 | 87.3 | 0.6 | -2.64 | 1.94 | 0.87 | 0.81 | 0.95 | 34833 | 4130 | 11 | 120 | 0 | 0 | 0 | logfile |
✔ | 7EGQ | 31138 | 2023-12-12 | 2021-03-25 | 3.35 | 3.74 | — | 3.5 | 0.008 | 1.56 | 155.0 | 0.10 | 18.51 | 0.01 | 1.423 | 23.53 | 9.99 | 10.5 | 88.9 | 0.6 | -3.84 | 0.84 | 0.83 | 1.81 | 3.5 | 0.003 | 0.67 | 0.0 | 0.04 | 17.35 | 0.00 | 2.097 | 11.75 | 0.17 | 5.9 | 94.1 | 0.0 | -0.88 | 1.60 | 0.84 | 0.84 | 1.79 | 54547 | 6644 | 32 | 116 | 29 | 0 | 0 | logfile |
✔ | 6KiQ | 9997 | 2023-12-10 | 2019-07-19 | 3.62 | 3.66 | — | 3.8 | 0.035 | 3.74 | 145.0 | 0.27 | 19.81 | 0.04 | 2.201 | 12.20 | 14.75 | 18.6 | 70.7 | 10.7 | -6.77 | 0.58 | 0.71 | 1.68 | 3.5 | 0.003 | 0.79 | 0.0 | 0.04 | 17.15 | 0.01 | 2.016 | 12.53 | 0.36 | 12.1 | 87.3 | 0.6 | -2.66 | 1.19 | 0.62 | 0.75 | 1.32 | 15093 | 968 | 3 | 0 | 0 | 0 | 7444 | logfile |
✔ | 7PBJ | 13293 | 2023-12-08 | 2021-08-02 | 3.4 | 3.54 | 3.40 | 3.2 | 0.018 | 2.20 | 140.0 | 0.13 | 19.50 | 0.01 | 0.650 | 29.74 | 11.71 | 2.5 | 96.9 | 0.6 | 1.69 | 0.71 | 0.67 | 2.07 | 3.2 | 0.004 | 0.70 | 0.0 | 0.04 | 17.42 | 0.00 | 1.896 | 14.50 | 0.24 | 3.7 | 96.3 | 0.1 | 0.78 | 2.34 | 0.89 | 0.86 | 2.01 | 59486 | 8015 | 42 | 0 | 28 | 14 | 0 | logfile |
✔ | 7Woo | 32653 | 2023-12-11 | 2022-01-22 | 3.71 | 4.08 | — | 3.9 | 0.010 | 1.69 | 139.0 | 0.10 | 15.86 | 0.01 | 1.041 | 23.12 | 4.33 | 9.3 | 88.5 | 2.2 | -3.11 | 0.47 | 0.44 | 0.31 | 3.9 | 0.003 | 0.81 | 0.0 | 0.04 | 16.42 | 0.00 | 2.097 | 15.49 | 0.35 | 8.6 | 91.1 | 0.3 | -0.38 | 1.64 | 0.47 | 0.44 | 0.13 | 66949 | 8644 | 12 | 0 | 0 | 0 | 0 | logfile |