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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7ZC6 | 14622 | 2023-12-09 | 2022-03-25 | 4.27 | 4.35 | 4.17 | 4.3 | 0.014 | 1.95 | 12.0 | 2.55 | 19.30 | 0.01 | 2.098 | 12.11 | 10.79 | 6.1 | 93.1 | 0.8 | -1.59 | 0.66 | 0.74 | — | 4.3 | 0.020 | 3.90 | 0.0 | 0.76 | 15.13 | 0.00 | 1.130 | 11.04 | 0.00 | 3.8 | 96.2 | 0.0 | -0.96 | 0.73 | 0.68 | 0.77 | — | 11428 | 1513 | 11 | 0 | 12 | 0 | 0 | logfile |
✔ | 7AWT | 11930 | 2023-12-11 | 2020-11-09 | 2.73 | 3.29 | — | 3.2 | 0.012 | 1.12 | 8.0 | 1.95 | 14.80 | 0.01 | 1.618 | 15.63 | 1.58 | 8.0 | 92.0 | 0.0 | -3.38 | 0.67 | 0.74 | 3.45 | 3.2 | 0.015 | 2.83 | 0.0 | 0.58 | 16.49 | 0.00 | 2.057 | 9.14 | 2.03 | 5.4 | 94.6 | 0.0 | -1.03 | 1.19 | 0.64 | 0.71 | 3.01 | 18891 | 2375 | 17 | 0 | 18 | 125 | 0 | logfile |
✔ | 6L7P | 0850 | 2023-12-15 | 2019-11-02 | 3.6 | 3.75 | — | 3.8 | 0.008 | 1.40 | 0.0 | 1.89 | 46.20 | 0.01 | 2.044 | 8.89 | 0.25 | 6.6 | 93.4 | 0.0 | -4.32 | 0.62 | 0.74 | 0.45 | 3.7 | 0.008 | 3.06 | 0.0 | 0.42 | 34.53 | 0.00 | 2.124 | 8.01 | 0.31 | 6.1 | 93.9 | 0.0 | 0.46 | 0.73 | 0.68 | 0.83 | 1.44 | 32798 | 3896 | 28 | 0 | 66 | 0 | 0 | logfile |
✔ | 7MHY | 23836 | 2023-12-08 | 2021-04-16 | 2.7 | 2.86 | — | 2.8 | 0.012 | 1.07 | 1.0 | 1.79 | 53.38 | 0.01 | 2.160 | 6.30 | 0.54 | 3.3 | 96.7 | 0.0 | 1.01 | 0.65 | 0.88 | 3.72 | 2.8 | 0.003 | 2.70 | 0.0 | 0.26 | 35.45 | 0.00 | 2.178 | 6.50 | 2.16 | 2.7 | 97.3 | 0.0 | 1.53 | 0.40 | 0.61 | 0.88 | 2.91 | 7904 | 912 | 6 | 0 | 18 | 15 | 0 | logfile |
✔ | 4Ci0 | 2513 | 2023-12-14 | 2013-12-05 | 3.36 | 3.43 | — | 3.4 | 0.014 | 1.93 | 24.0 | 1.74 | 23.87 | 0.03 | 1.915 | 119.42 | 39.11 | 3.4 | 96.5 | 0.1 | 1.78 | 0.71 | 0.70 | 0.31 | 3.4 | 0.014 | 2.74 | 0.0 | 0.54 | 18.70 | 0.00 | 2.126 | 19.49 | 0.74 | 4.2 | 95.8 | 0.0 | -0.41 | 2.13 | 0.82 | 0.86 | 1.35 | 83472 | 10716 | 72 | 0 | 108 | 0 | 0 | logfile |
✔ | 7MHZ | 23837 | 2023-12-08 | 2021-04-16 | 3.2 | 3.82 | — | 3.7 | 0.005 | 0.77 | 0.0 | 1.63 | 49.49 | 0.00 | 2.210 | 7.55 | 0.00 | 3.4 | 96.6 | 0.0 | 1.45 | 0.61 | 0.79 | 2.94 | 3.7 | 0.002 | 2.50 | 0.0 | 0.25 | 33.68 | 0.00 | 2.197 | 6.79 | 0.17 | 2.4 | 97.6 | 0.0 | 1.83 | 0.35 | 0.62 | 0.81 | 2.71 | 6189 | 723 | 6 | 0 | 15 | 0 | 0 | logfile |
✔ | 6Q9D | 4480 | 2023-12-14 | 2018-12-18 | 3.8 | 3.99 | — | 3.9 | 0.007 | 1.15 | 0.0 | 1.60 | 10.39 | 0.01 | 2.107 | 6.42 | 0.24 | 10.8 | 89.0 | 0.2 | -4.23 | 0.74 | 0.82 | 2.23 | 3.9 | 0.012 | 2.40 | 0.0 | 0.48 | 15.92 | 0.00 | 2.123 | 13.68 | 0.37 | 9.9 | 90.1 | 0.0 | -1.36 | 2.17 | 0.74 | 0.83 | 1.82 | 27662 | 3463 | 26 | 0 | 12 | 0 | 0 | logfile |
✔ | 6ZK9 | 11241 | 2023-12-14 | 2020-06-30 | 2.3 | 2.55 | — | 2.4 | 0.008 | 1.05 | 0.0 | 1.58 | 10.85 | 0.01 | 2.257 | 5.07 | 0.07 | 3.2 | 96.8 | 0.0 | -2.52 | 0.78 | 0.92 | 6.57 | 2.4 | 0.012 | 2.33 | 0.0 | 0.48 | 15.18 | 0.00 | 2.089 | 8.58 | 1.27 | 2.7 | 97.3 | 0.0 | 0.45 | 0.47 | 0.80 | 0.93 | 6.08 | 29587 | 3480 | 45 | 0 | 19 | 1472 | 0 | logfile |
✔ | 7ZC5 | 14620 | 2023-12-16 | 2022-03-25 | 3.0 | 2.69 | — | 2.6 | 0.007 | 0.85 | 0.0 | 1.48 | 15.78 | 0.01 | 2.216 | 5.43 | 1.96 | 3.0 | 97.0 | 0.0 | -0.62 | 0.89 | 0.87 | 3.49 | 2.7 | 0.011 | 2.21 | 0.0 | 0.44 | 16.09 | 0.00 | 2.066 | 9.18 | 2.38 | 2.6 | 97.4 | 0.0 | 1.18 | 1.10 | 0.89 | 0.86 | 3.28 | 36692 | 4645 | 24 | 0 | 23 | 0 | 0 | logfile |
✔ | 7P62 | 13215 | 2023-12-16 | 2021-07-15 | 3.6 | 3.37 | — | 3.2 | 0.004 | 0.83 | 0.0 | 1.48 | 15.12 | 0.01 | 2.217 | 7.10 | 0.45 | 4.1 | 95.9 | 0.0 | -1.26 | 0.89 | 0.86 | 2.08 | 3.2 | 0.012 | 2.23 | 0.0 | 0.44 | 15.49 | 0.00 | 2.118 | 11.88 | 0.34 | 4.1 | 95.9 | 0.0 | 0.44 | 0.39 | 0.89 | 0.86 | 2.20 | 36597 | 4675 | 19 | 0 | 13 | 0 | 0 | logfile |
✔ | 7P7K | 13238 | 2023-12-16 | 2021-07-19 | 3.1 | 2.77 | — | 2.7 | 0.006 | 0.71 | 0.0 | 1.48 | 13.06 | 0.01 | 2.238 | 4.98 | 2.21 | 2.5 | 97.5 | 0.0 | -0.42 | 0.90 | 0.89 | 3.67 | 2.6 | 0.011 | 2.20 | 0.0 | 0.44 | 14.57 | 0.00 | 2.057 | 9.00 | 0.37 | 2.2 | 97.8 | 0.0 | 1.41 | 1.15 | 0.90 | 0.88 | 3.16 | 36531 | 4630 | 23 | 0 | 23 | 0 | 0 | logfile |
✔ | 7P61 | 13214 | 2023-12-16 | 2021-07-15 | 3.2 | 3.01 | — | 3.1 | 0.004 | 0.82 | 0.0 | 1.47 | 15.22 | 0.01 | 2.156 | 7.19 | 0.29 | 3.9 | 96.1 | 0.0 | -1.15 | 0.88 | 0.87 | 2.37 | 3.1 | 0.012 | 2.23 | 0.0 | 0.44 | 15.60 | 0.00 | 1.990 | 11.64 | 0.31 | 4.2 | 95.8 | 0.0 | 0.40 | 1.16 | 0.90 | 0.89 | 2.69 | 36690 | 4681 | 20 | 0 | 15 | 0 | 0 | logfile |
✔ | 6ZJL | 11235 | 2023-12-16 | 2020-06-29 | 4.3 | 4.31 | — | 4.3 | 0.021 | 2.33 | 37.0 | 1.41 | 15.36 | 0.02 | 2.162 | 1.03 | 2.43 | 9.6 | 87.6 | 2.9 | -4.76 | 0.55 | 0.77 | — | 4.3 | 0.012 | 2.30 | 0.0 | 0.44 | 14.33 | 0.01 | 1.099 | 15.58 | 0.08 | 5.6 | 94.1 | 0.2 | -0.56 | 2.05 | 0.56 | 0.79 | — | 36057 | 4646 | 20 | 0 | 10 | 0 | 0 | logfile |
✔ | 6ZiY | 11231 | 2023-12-16 | 2020-06-26 | 4.25 | 4.27 | — | 4.2 | 0.021 | 2.37 | 37.0 | 1.39 | 16.06 | 0.02 | 1.919 | 1.33 | 3.34 | 9.9 | 86.7 | 3.4 | -4.76 | 0.54 | 0.76 | — | 4.2 | 0.012 | 2.29 | 0.0 | 0.44 | 14.55 | 0.00 | 2.144 | 12.61 | 0.03 | 5.3 | 94.5 | 0.2 | -0.40 | 2.06 | 0.55 | 0.78 | — | 36101 | 4646 | 20 | 0 | 11 | 0 | 0 | logfile |
✔ | 4UQ8 | 2676 | 2023-12-14 | 2014-06-21 | 4.95 | 5.05 | 4.64 | 4.9 | 0.012 | 2.07 | 23.0 | 1.38 | 6.71 | 0.01 | 1.032 | 64.12 | 25.00 | 0.0 | 0.0 | 0.0 | — | 0.57 | 0.75 | — | 4.9 | 0.013 | 2.54 | 0.0 | 0.41 | 5.47 | 0.00 | 2.110 | 23.19 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.11 | 0.61 | 0.83 | — | 28647 | 33 | 54 | 0 | 5686 | 0 | 0 | logfile |
✔ | 7URF | 26711 | 2023-12-08 | 2022-04-21 | 2.8 | 2.78 | 2.80 | 2.9 | 0.009 | 0.78 | 0.0 | 1.24 | 38.42 | 0.00 | 2.148 | 5.35 | 0.00 | 3.1 | 96.9 | 0.0 | -0.96 | 0.62 | 0.88 | 3.48 | 2.9 | 0.003 | 1.89 | 0.0 | 0.19 | 28.88 | 0.00 | 2.167 | 5.01 | 1.93 | 3.4 | 96.6 | 0.0 | 1.93 | 0.98 | 0.63 | 0.89 | 2.79 | 6133 | 722 | 5 | 0 | 8 | 0 | 0 | logfile |
✔ | 8DFU | 27414 | 2023-12-12 | 2022-06-22 | 3.44 | 3.84 | 3.52 | 3.8 | 0.010 | 0.92 | 0.0 | 1.18 | 31.93 | 0.00 | 2.461 | 3.48 | 0.00 | 1.2 | 98.8 | 0.0 | 1.08 | 0.59 | 0.85 | 1.18 | 3.8 | 0.004 | 0.56 | 0.0 | 0.03 | 29.60 | 0.01 | 2.258 | 5.51 | 0.50 | 1.7 | 98.3 | 0.0 | 4.47 | 1.19 | 0.58 | 0.84 | 0.57 | 22710 | 2520 | 56 | 0 | 60 | 0 | 0 | logfile |
✔ | 8ESW | 28581 | 2023-12-10 | 2022-10-15 | 3.3 | 3.67 | 3.46 | 3.7 | 0.006 | 1.01 | 0.0 | 1.05 | 16.62 | 0.01 | 1.932 | 5.33 | 0.63 | 3.0 | 97.0 | 0.0 | -2.36 | 0.74 | 0.83 | 2.53 | 3.6 | 0.008 | 1.59 | 0.0 | 0.31 | 16.85 | 0.00 | 1.405 | 9.44 | 0.26 | 2.6 | 97.4 | 0.0 | 0.76 | 0.38 | 0.75 | 0.87 | 2.24 | 66555 | 8036 | 64 | 0 | 76 | 0 | 0 | logfile |
✔ | 7AK5 | 11810 | 2023-12-10 | 2020-09-29 | 3.17 | 2.97 | 3.17 | 3.1 | 0.005 | 0.73 | 0.0 | 1.04 | 15.54 | 0.00 | 1.865 | 7.38 | 0.01 | 5.9 | 94.0 | 0.0 | -3.68 | 0.66 | 0.82 | 3.16 | 3.1 | 0.008 | 1.60 | 0.0 | 0.31 | 16.74 | 0.00 | 2.142 | 8.25 | 0.28 | 3.9 | 96.1 | 0.0 | 0.52 | 1.48 | 0.68 | 0.86 | 2.62 | 65895 | 8069 | 64 | 0 | 28 | 0 | 0 | logfile |
✔ | 6ZKU | 11262 | 2023-12-09 | 2020-06-30 | 3.0 | 2.73 | — | 2.9 | 0.009 | 1.03 | 0.0 | 1.04 | 12.30 | 0.01 | 2.218 | 4.96 | 0.06 | 4.1 | 95.9 | 0.0 | -2.98 | 0.62 | 0.82 | 3.82 | 2.9 | 0.009 | 1.63 | 0.0 | 0.32 | 16.69 | 0.00 | 2.077 | 12.12 | 2.11 | 3.9 | 96.1 | 0.0 | 0.29 | 0.67 | 0.63 | 0.84 | 3.14 | 65505 | 7966 | 69 | 0 | 36 | 0 | 0 | logfile |