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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7Q5A | 13830 | 2023-12-09 | 2021-11-03 | 2.46 | 2.69 | — | 2.6 | 0.112 | 1.10 | 0.0 | 0.06 | 9.54 | 0.00 | 2.247 | 3.06 | 0.00 | 0.0 | 100.0 | 0.0 | 0.99 | 0.66 | 0.84 | 6.72 | 2.6 | 0.055 | 4.01 | 258.0 | 0.21 | 16.76 | 0.02 | 1.950 | 33.36 | 2.52 | 0.0 | 100.0 | 0.0 | 0.88 | 1.64 | 0.67 | 0.85 | 6.22 | 61600 | 5600 | 800 | 0 | 1600 | 0 | 0 | logfile |
✔ | 6RVW | 4444 | 2023-12-08 | 2019-06-03 | 3.7 | 3.98 | — | 3.9 | 0.008 | 0.66 | 0.0 | 0.05 | 14.12 | 0.00 | 2.263 | 1.75 | 0.00 | 2.0 | 98.0 | 0.0 | -2.37 | 0.79 | 0.82 | 2.87 | 4.0 | 0.007 | 0.74 | 0.0 | 0.05 | 18.10 | 0.00 | 2.058 | 12.50 | 1.53 | 2.3 | 97.7 | 0.0 | -1.61 | 3.20 | 0.80 | 0.84 | 3.33 | 110208 | 14520 | 384 | 0 | 120 | 0 | 0 | logfile |
✔ | 6RVV | 4443 | 2023-12-08 | 2019-06-03 | 3.7 | 3.95 | — | 3.9 | 0.006 | 0.60 | 0.0 | 0.05 | 13.27 | 0.00 | 2.245 | 2.48 | 0.00 | 2.0 | 98.0 | 0.0 | -2.44 | 0.78 | 0.82 | 2.75 | 3.9 | 0.005 | 0.67 | 0.0 | 0.05 | 18.05 | 0.00 | 2.039 | 11.35 | 1.28 | 0.4 | 99.6 | 0.0 | -0.79 | 1.07 | 0.79 | 0.83 | 2.94 | 110208 | 14520 | 384 | 0 | 120 | 0 | 0 | logfile |
✔ | 5W7V | 8781 | 2023-12-12 | 2017-06-20 | 3.8 | 3.42 | — | 3.5 | 0.007 | 0.77 | 0.0 | 0.06 | 12.79 | 0.00 | 2.365 | 15.84 | 0.00 | 1.4 | 98.6 | 0.0 | -2.52 | 0.47 | 0.74 | 3.24 | 3.4 | 0.006 | 0.83 | 0.0 | 0.06 | 15.83 | 0.00 | 2.285 | 7.47 | 2.21 | 3.3 | 96.7 | 0.0 | -0.77 | 1.27 | 0.54 | 0.79 | 3.99 | 20430 | 2640 | 270 | 0 | 0 | 0 | 0 | logfile |
✔ | 7o0V | 12680 | 2023-12-08 | 2021-03-27 | 2.5 | 2.50 | — | 2.4 | 0.018 | 4.38 | 0.0 | 0.06 | 22.57 | 0.01 | 2.117 | 1.81 | 0.31 | 1.2 | 98.8 | 0.0 | 1.63 | 0.82 | 0.86 | 5.41 | 2.4 | 0.009 | 1.88 | 0.0 | 0.05 | 20.36 | 0.01 | 2.029 | 8.72 | 1.46 | 1.1 | 98.9 | 0.0 | 3.10 | 1.12 | 0.84 | 0.89 | 4.49 | 55475 | 4947 | 238 | 0 | 317 | 489 | 0 | logfile |
✔ | 7o0X | 12682 | 2023-12-08 | 2021-03-28 | 2.44 | 2.39 | — | 2.3 | 0.018 | 4.34 | 0.0 | 0.06 | 22.65 | 0.01 | 2.099 | 1.65 | 0.23 | 1.4 | 98.6 | 0.0 | 1.33 | 0.82 | 0.86 | 5.55 | 2.3 | 0.005 | 1.75 | 0.0 | 0.04 | 19.50 | 0.00 | 2.068 | 6.89 | 1.23 | 1.0 | 99.0 | 0.0 | 3.67 | 0.49 | 0.83 | 0.88 | 4.37 | 56446 | 5072 | 237 | 0 | 316 | 521 | 0 | logfile |
✔ | 7o0U | 12679 | 2023-12-08 | 2021-03-27 | 2.35 | 2.42 | — | 2.3 | 0.018 | 4.37 | 0.0 | 0.06 | 22.61 | 0.01 | 2.121 | 1.73 | 0.41 | 1.2 | 98.8 | 0.0 | 1.39 | 0.83 | 0.86 | 5.52 | 2.3 | 0.004 | 1.70 | 0.0 | 0.04 | 19.36 | 0.00 | 1.811 | 7.40 | 1.28 | 0.9 | 99.1 | 0.0 | 3.70 | 0.50 | 0.84 | 0.90 | 4.35 | 55758 | 4972 | 236 | 0 | 320 | 491 | 0 | logfile |
✔ | 7RoE | 24593 | 2023-12-13 | 2021-07-30 | 3.7 | 3.80 | — | 3.5 | 0.006 | 0.69 | 0.0 | 0.04 | 12.63 | 0.01 | 2.266 | 11.99 | 4.00 | 6.7 | 93.3 | 0.0 | 1.70 | 0.67 | 0.86 | 1.96 | 3.5 | 0.004 | 0.73 | 0.0 | 0.04 | 14.52 | 0.01 | 2.191 | 10.10 | 0.58 | 5.7 | 94.2 | 0.1 | 3.40 | 0.52 | 0.67 | 0.85 | 1.77 | 137200 | 18800 | 200 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Ro6 | 24589 | 2023-12-13 | 2021-07-30 | 4.1 | 4.30 | — | 3.8 | 0.006 | 0.69 | 0.0 | 0.04 | 12.71 | 0.01 | 2.220 | 13.37 | 1.33 | 5.4 | 94.6 | 0.0 | 1.57 | 0.68 | 0.86 | — | 3.8 | 0.003 | 0.72 | 0.0 | 0.05 | 12.01 | 0.01 | 2.189 | 10.14 | 0.00 | 4.5 | 95.5 | 0.0 | 3.10 | 0.56 | 0.68 | 0.85 | — | 137200 | 18800 | 200 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Ro5 | 24588 | 2023-12-14 | 2021-07-30 | 4.1 | 4.27 | — | 3.9 | 0.005 | 0.85 | 0.0 | 0.05 | 13.48 | 0.01 | 2.235 | 12.45 | 4.00 | 4.3 | 95.7 | 0.0 | 1.05 | 0.68 | 0.85 | — | 3.9 | 0.004 | 0.76 | 0.0 | 0.05 | 11.70 | 0.01 | 2.184 | 12.71 | 0.00 | 5.8 | 94.2 | 0.0 | 2.75 | 0.56 | 0.68 | 0.85 | — | 137200 | 18800 | 200 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Ro4 | 24587 | 2023-12-13 | 2021-07-30 | 4.3 | 4.51 | — | 4.2 | 0.006 | 0.78 | 0.0 | 0.05 | 13.23 | 0.01 | 2.237 | 17.04 | 4.00 | 5.4 | 94.6 | 0.0 | 0.68 | 0.68 | 0.85 | — | 4.2 | 0.004 | 0.79 | 0.0 | 0.05 | 11.12 | 0.01 | 2.104 | 13.80 | 0.01 | 6.1 | 93.9 | 0.0 | 1.92 | 0.60 | 0.68 | 0.85 | — | 137200 | 18800 | 200 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RoC | 24591 | 2023-12-13 | 2021-07-30 | 3.7 | 3.89 | — | 3.7 | 0.003 | 0.68 | 0.0 | 0.05 | 11.37 | 0.01 | 2.563 | 18.31 | 0.00 | 5.4 | 94.6 | 0.0 | 3.01 | 0.69 | 0.84 | 1.59 | 3.7 | 0.003 | 0.76 | 0.0 | 0.04 | 14.35 | 0.01 | 2.157 | 9.23 | 0.53 | 5.0 | 95.0 | 0.0 | 3.21 | 1.21 | 0.69 | 0.85 | 1.39 | 137200 | 18800 | 200 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Ro3 | 24586 | 2023-12-13 | 2021-07-30 | 4.8 | 4.78 | — | 4.4 | 0.004 | 0.65 | 0.0 | 0.05 | 12.47 | 0.01 | 2.358 | 11.99 | 1.33 | 4.3 | 95.7 | 0.0 | 1.70 | 0.67 | 0.84 | — | 4.4 | 0.005 | 1.03 | 0.0 | 0.05 | 11.66 | 0.01 | 2.227 | 24.92 | 0.00 | 6.5 | 93.5 | 0.0 | 0.29 | 2.18 | 0.68 | 0.84 | — | 137200 | 18800 | 200 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RoH | 24595 | 2023-12-14 | 2021-07-30 | 4.0 | 4.01 | — | 3.8 | 0.005 | 0.67 | 0.0 | 0.04 | 12.43 | 0.01 | 2.350 | 11.51 | 2.67 | 5.4 | 94.6 | 0.0 | 0.83 | 0.67 | 0.85 | — | 3.8 | 0.004 | 0.75 | 0.0 | 0.04 | 14.46 | 0.01 | 2.199 | 10.84 | 0.38 | 5.5 | 94.5 | 0.0 | 3.00 | 1.24 | 0.67 | 0.84 | — | 137200 | 18800 | 200 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RoG | 24594 | 2023-12-13 | 2021-07-30 | 3.8 | 4.00 | — | 3.7 | 0.007 | 0.74 | 0.0 | 0.05 | 12.33 | 0.01 | 2.355 | 14.52 | 1.33 | 5.4 | 94.6 | 0.0 | 1.76 | 0.67 | 0.85 | 1.80 | 3.8 | 0.004 | 0.77 | 0.0 | 0.04 | 14.26 | 0.01 | 2.175 | 11.90 | 0.23 | 4.4 | 95.6 | 0.0 | 3.10 | 1.65 | 0.66 | 0.84 | 2.05 | 137200 | 18800 | 200 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RoB | 24590 | 2023-12-14 | 2021-07-30 | 3.9 | 4.43 | — | 4.1 | 0.004 | 0.71 | 0.0 | 0.04 | 13.08 | 0.01 | 2.151 | 11.28 | 4.00 | 4.3 | 95.7 | 0.0 | 1.28 | 0.68 | 0.85 | 2.11 | 4.1 | 0.004 | 0.94 | 1.0 | 0.05 | 14.23 | 0.01 | 2.079 | 12.67 | 0.64 | 5.3 | 94.7 | 0.0 | 2.47 | 1.23 | 0.68 | 0.85 | 1.54 | 137200 | 18800 | 200 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Roi | 24597 | 2023-12-14 | 2021-07-30 | 4.3 | 4.43 | — | 4.1 | 0.004 | 0.66 | 0.0 | 0.05 | 12.41 | 0.01 | 2.400 | 9.73 | 1.33 | 4.3 | 95.7 | 0.0 | 1.63 | 0.67 | 0.85 | — | 4.1 | 0.004 | 0.77 | 0.0 | 0.05 | 11.38 | 0.01 | 2.186 | 11.55 | 0.00 | 4.3 | 95.7 | 0.0 | 2.65 | 0.64 | 0.67 | 0.85 | — | 137200 | 18800 | 200 | 0 | 0 | 0 | 0 | logfile |
✔ | 5VLZ | 8709 | 2023-12-16 | 2017-04-26 | 4.4 | 4.55 | — | 4.4 | 0.006 | 0.89 | 0.0 | 0.00 | 5.88 | 0.00 | 2.272 | 2.04 | 0.00 | 6.1 | 93.9 | 0.0 | -1.92 | 0.80 | 0.66 | — | 4.4 | 0.002 | 0.73 | 0.0 | 0.00 | 4.75 | 0.00 | 2.276 | 0.95 | 0.00 | 4.8 | 95.2 | 0.0 | -0.40 | 2.02 | 0.83 | 0.78 | — | 96897 | 24179 | 181 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UJL | 26566 | 2023-12-14 | 2022-03-31 | 3.3 | 3.53 | 3.27 | 3.4 | 0.015 | 2.11 | 120.0 | 0.14 | 20.14 | 0.02 | 1.760 | 6.20 | 0.00 | 5.1 | 94.9 | 0.0 | -1.45 | 0.58 | 0.70 | 1.54 | 3.4 | 0.005 | 0.67 | 0.0 | 0.04 | 20.98 | 0.00 | 2.170 | 6.74 | 0.59 | 3.1 | 96.9 | 0.0 | 0.37 | 1.05 | 0.68 | 0.92 | 3.61 | 86820 | 9660 | 180 | 480 | 0 | 0 | 0 | logfile |
✔ | 6RRS | 4989 | 2023-12-15 | 2019-05-20 | 3.9 | 4.30 | 4.41 | 3.8 | 0.013 | 2.10 | 0.0 | 0.00 | 2.04 | 0.01 | 2.364 | 0.79 | 0.00 | 3.9 | 95.3 | 0.8 | -0.85 | 0.56 | 0.64 | — | 3.8 | 0.004 | 0.84 | 0.0 | 0.00 | 7.15 | 0.00 | 2.195 | 1.79 | 0.00 | 15.0 | 85.0 | 0.0 | -1.14 | 2.03 | 0.80 | 0.71 | — | 93060 | 23220 | 180 | 0 | 0 | 0 | 0 | logfile |