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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5VLZ | 8709 | 2023-12-16 | 2017-04-26 | 4.4 | 4.55 | — | 4.4 | 0.006 | 0.89 | 0.0 | 0.00 | 5.88 | 0.00 | 2.272 | 2.04 | 0.00 | 6.1 | 93.9 | 0.0 | -1.92 | 0.80 | 0.66 | — | 4.4 | 0.002 | 0.73 | 0.0 | 0.00 | 4.75 | 0.00 | 2.276 | 0.95 | 0.00 | 4.8 | 95.2 | 0.0 | -0.40 | 2.02 | 0.83 | 0.78 | — | 96897 | 24179 | 181 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RRS | 4989 | 2023-12-15 | 2019-05-20 | 3.9 | 4.30 | 4.41 | 3.8 | 0.013 | 2.10 | 0.0 | 0.00 | 2.04 | 0.01 | 2.364 | 0.79 | 0.00 | 3.9 | 95.3 | 0.8 | -0.85 | 0.56 | 0.64 | — | 3.8 | 0.004 | 0.84 | 0.0 | 0.00 | 7.15 | 0.00 | 2.195 | 1.79 | 0.00 | 15.0 | 85.0 | 0.0 | -1.14 | 2.03 | 0.80 | 0.71 | — | 93060 | 23220 | 180 | 0 | 0 | 0 | 0 | logfile |
✔ | 7FiK | 31600 | 2023-12-09 | 2021-07-31 | 3.7 | 3.41 | — | 2.2 | 0.007 | 0.98 | 1.0 | 0.05 | 9.93 | 0.00 | 1.868 | 3.44 | 3.73 | 6.0 | 93.8 | 0.2 | -2.13 | 0.50 | 0.52 | 1.35 | 2.2 | 0.002 | 0.60 | 0.0 | 0.04 | 11.18 | 0.00 | 2.017 | 5.54 | 0.21 | 3.9 | 96.1 | 0.0 | 1.53 | 0.65 | 0.60 | 0.69 | 1.62 | 116163 | 19039 | 32 | 0 | 722 | 0 | 0 | logfile |
✔ | 7RoE | 24593 | 2023-12-13 | 2021-07-30 | 3.7 | 3.80 | — | 3.5 | 0.006 | 0.69 | 0.0 | 0.04 | 12.63 | 0.01 | 2.266 | 11.99 | 4.00 | 6.7 | 93.3 | 0.0 | 1.70 | 0.67 | 0.86 | 1.96 | 3.5 | 0.004 | 0.73 | 0.0 | 0.04 | 14.52 | 0.01 | 2.191 | 10.10 | 0.58 | 5.7 | 94.2 | 0.1 | 3.40 | 0.52 | 0.67 | 0.85 | 1.77 | 137200 | 18800 | 200 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Ro6 | 24589 | 2023-12-13 | 2021-07-30 | 4.1 | 4.30 | — | 3.8 | 0.006 | 0.69 | 0.0 | 0.04 | 12.71 | 0.01 | 2.220 | 13.37 | 1.33 | 5.4 | 94.6 | 0.0 | 1.57 | 0.68 | 0.86 | — | 3.8 | 0.003 | 0.72 | 0.0 | 0.05 | 12.01 | 0.01 | 2.189 | 10.14 | 0.00 | 4.5 | 95.5 | 0.0 | 3.10 | 0.56 | 0.68 | 0.85 | — | 137200 | 18800 | 200 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Ro5 | 24588 | 2023-12-14 | 2021-07-30 | 4.1 | 4.27 | — | 3.9 | 0.005 | 0.85 | 0.0 | 0.05 | 13.48 | 0.01 | 2.235 | 12.45 | 4.00 | 4.3 | 95.7 | 0.0 | 1.05 | 0.68 | 0.85 | — | 3.9 | 0.004 | 0.76 | 0.0 | 0.05 | 11.70 | 0.01 | 2.184 | 12.71 | 0.00 | 5.8 | 94.2 | 0.0 | 2.75 | 0.56 | 0.68 | 0.85 | — | 137200 | 18800 | 200 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Ro3 | 24586 | 2023-12-13 | 2021-07-30 | 4.8 | 4.78 | — | 4.4 | 0.004 | 0.65 | 0.0 | 0.05 | 12.47 | 0.01 | 2.358 | 11.99 | 1.33 | 4.3 | 95.7 | 0.0 | 1.70 | 0.67 | 0.84 | — | 4.4 | 0.005 | 1.03 | 0.0 | 0.05 | 11.66 | 0.01 | 2.227 | 24.92 | 0.00 | 6.5 | 93.5 | 0.0 | 0.29 | 2.18 | 0.68 | 0.84 | — | 137200 | 18800 | 200 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RoH | 24595 | 2023-12-14 | 2021-07-30 | 4.0 | 4.01 | — | 3.8 | 0.005 | 0.67 | 0.0 | 0.04 | 12.43 | 0.01 | 2.350 | 11.51 | 2.67 | 5.4 | 94.6 | 0.0 | 0.83 | 0.67 | 0.85 | — | 3.8 | 0.004 | 0.75 | 0.0 | 0.04 | 14.46 | 0.01 | 2.199 | 10.84 | 0.38 | 5.5 | 94.5 | 0.0 | 3.00 | 1.24 | 0.67 | 0.84 | — | 137200 | 18800 | 200 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Ro4 | 24587 | 2023-12-13 | 2021-07-30 | 4.3 | 4.51 | — | 4.2 | 0.006 | 0.78 | 0.0 | 0.05 | 13.23 | 0.01 | 2.237 | 17.04 | 4.00 | 5.4 | 94.6 | 0.0 | 0.68 | 0.68 | 0.85 | — | 4.2 | 0.004 | 0.79 | 0.0 | 0.05 | 11.12 | 0.01 | 2.104 | 13.80 | 0.01 | 6.1 | 93.9 | 0.0 | 1.92 | 0.60 | 0.68 | 0.85 | — | 137200 | 18800 | 200 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RoC | 24591 | 2023-12-13 | 2021-07-30 | 3.7 | 3.89 | — | 3.7 | 0.003 | 0.68 | 0.0 | 0.05 | 11.37 | 0.01 | 2.563 | 18.31 | 0.00 | 5.4 | 94.6 | 0.0 | 3.01 | 0.69 | 0.84 | 1.59 | 3.7 | 0.003 | 0.76 | 0.0 | 0.04 | 14.35 | 0.01 | 2.157 | 9.23 | 0.53 | 5.0 | 95.0 | 0.0 | 3.21 | 1.21 | 0.69 | 0.85 | 1.39 | 137200 | 18800 | 200 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RoG | 24594 | 2023-12-13 | 2021-07-30 | 3.8 | 4.00 | — | 3.7 | 0.007 | 0.74 | 0.0 | 0.05 | 12.33 | 0.01 | 2.355 | 14.52 | 1.33 | 5.4 | 94.6 | 0.0 | 1.76 | 0.67 | 0.85 | 1.80 | 3.8 | 0.004 | 0.77 | 0.0 | 0.04 | 14.26 | 0.01 | 2.175 | 11.90 | 0.23 | 4.4 | 95.6 | 0.0 | 3.10 | 1.65 | 0.66 | 0.84 | 2.05 | 137200 | 18800 | 200 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RoB | 24590 | 2023-12-14 | 2021-07-30 | 3.9 | 4.43 | — | 4.1 | 0.004 | 0.71 | 0.0 | 0.04 | 13.08 | 0.01 | 2.151 | 11.28 | 4.00 | 4.3 | 95.7 | 0.0 | 1.28 | 0.68 | 0.85 | 2.11 | 4.1 | 0.004 | 0.94 | 1.0 | 0.05 | 14.23 | 0.01 | 2.079 | 12.67 | 0.64 | 5.3 | 94.7 | 0.0 | 2.47 | 1.23 | 0.68 | 0.85 | 1.54 | 137200 | 18800 | 200 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Roi | 24597 | 2023-12-14 | 2021-07-30 | 4.3 | 4.43 | — | 4.1 | 0.004 | 0.66 | 0.0 | 0.05 | 12.41 | 0.01 | 2.400 | 9.73 | 1.33 | 4.3 | 95.7 | 0.0 | 1.63 | 0.67 | 0.85 | — | 4.1 | 0.004 | 0.77 | 0.0 | 0.05 | 11.38 | 0.01 | 2.186 | 11.55 | 0.00 | 4.3 | 95.7 | 0.0 | 2.65 | 0.64 | 0.67 | 0.85 | — | 137200 | 18800 | 200 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WKK | 32566 | 2023-12-15 | 2022-01-10 | 4.2 | 4.30 | — | 3.9 | 0.006 | 0.63 | 0.0 | 0.04 | 4.94 | 0.00 | 2.138 | 2.83 | 0.00 | 4.7 | 95.2 | 0.1 | -2.36 | 0.46 | 0.60 | — | 3.8 | 0.005 | 0.74 | 0.0 | 0.04 | 5.51 | 0.00 | 2.124 | 3.84 | 0.00 | 9.6 | 90.4 | 0.0 | -0.97 | 0.64 | 0.52 | 0.69 | — | 92821 | 18728 | 30 | 0 | 0 | 0 | 0 | logfile |
✔ | 6AB5 | 6999 | 2023-12-15 | 2018-07-20 | 3.7 | 3.79 | — | 3.7 | 0.007 | 0.96 | 6.0 | 0.06 | 11.27 | 0.01 | 1.686 | 24.89 | 0.75 | 5.6 | 94.4 | 0.0 | -3.80 | 0.85 | 0.86 | 3.48 | 3.7 | 0.007 | 0.66 | 0.0 | 0.05 | 14.07 | 0.00 | 2.100 | 12.10 | 0.29 | 7.2 | 92.8 | 0.0 | -2.04 | 0.62 | 0.87 | 0.87 | 2.34 | 139740 | 18180 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 7o3W | 12710 | 2023-12-14 | 2021-04-03 | 4.9 | 6.81 | 5.80 | 7.1 | 0.017 | 1.84 | 0.0 | 0.11 | 18.08 | 0.01 | 0.360 | 24.19 | 0.30 | 3.5 | 96.4 | 0.2 | 1.74 | 0.66 | 0.54 | — | 7.1 | 0.004 | 0.92 | 0.0 | 0.04 | 15.52 | 0.00 | 1.988 | 27.22 | 0.01 | 1.6 | 98.3 | 0.1 | 1.59 | 2.07 | 0.75 | 0.81 | — | 138390 | 17976 | 98 | 0 | 14 | 0 | 0 | logfile |
✔ | 8i4M | 35175 | 2023-12-13 | 2023-01-19 | 3.81 | 4.11 | 3.85 | 4.0 | 0.003 | 0.67 | 0.0 | 0.04 | 16.95 | 0.00 | 2.042 | 11.62 | 0.28 | 5.0 | 94.8 | 0.2 | 0.30 | 0.68 | 0.82 | 1.47 | 4.0 | 0.004 | 0.67 | 0.0 | 0.04 | 17.43 | 0.00 | 2.131 | 11.17 | 0.36 | 6.3 | 93.5 | 0.2 | 0.35 | 1.77 | 0.67 | 0.82 | 1.46 | 134400 | 17436 | 48 | 0 | 0 | 0 | 0 | logfile |
✔ | 7T64 | 25709 | 2023-12-13 | 2021-12-13 | 4.0 | 4.36 | 4.08 | 3.9 | 0.002 | 0.64 | 0.0 | 0.04 | 14.83 | 0.00 | 2.175 | 5.90 | 0.00 | 6.1 | 93.5 | 0.4 | -0.38 | 0.76 | 0.70 | — | 4.0 | 0.004 | 0.68 | 0.0 | 0.04 | 16.19 | 0.00 | 2.067 | 11.75 | 0.25 | 9.1 | 90.7 | 0.2 | -0.27 | 0.50 | 0.77 | 0.74 | — | 134196 | 17416 | 12 | 0 | 4 | 0 | 0 | logfile |
✔ | 7U9Z | 26410 | 2023-12-15 | 2022-03-11 | 3.29 | 3.51 | — | 1.9 | 0.003 | 0.76 | 4.0 | 0.04 | 15.41 | 0.01 | 1.938 | 11.72 | 1.19 | 4.6 | 95.3 | 0.1 | 0.57 | 0.86 | 0.79 | 2.26 | 1.9 | 0.003 | 0.65 | 0.0 | 0.04 | 15.80 | 0.00 | 2.134 | 11.25 | 0.09 | 4.7 | 95.3 | 0.1 | 0.86 | 1.01 | 0.87 | 0.85 | 2.87 | 138688 | 17332 | 12 | 0 | 20 | 0 | 0 | logfile |
✔ | 7U9Q | 26405 | 2023-12-15 | 2022-03-11 | 3.11 | 3.51 | — | 1.9 | 0.003 | 0.85 | 0.0 | 0.04 | 14.30 | 0.01 | 2.065 | 12.40 | 0.66 | 3.4 | 96.5 | 0.1 | -1.28 | 0.86 | 0.79 | 2.19 | 1.9 | 0.004 | 0.72 | 0.0 | 0.04 | 14.83 | 0.00 | 2.099 | 12.36 | 0.16 | 3.7 | 96.2 | 0.1 | 0.74 | 0.47 | 0.88 | 0.86 | 2.51 | 138608 | 17324 | 12 | 0 | 12 | 0 | 0 | logfile |