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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7Q5A | 13830 | 2023-12-09 | 2021-11-03 | 2.46 | 2.69 | — | 2.6 | 0.112 | 1.10 | 0.0 | 0.06 | 9.54 | 0.00 | 2.247 | 3.06 | 0.00 | 0.0 | 100.0 | 0.0 | 0.99 | 0.66 | 0.84 | 6.72 | 2.6 | 0.055 | 4.01 | 258.0 | 0.21 | 16.76 | 0.02 | 1.950 | 33.36 | 2.52 | 0.0 | 100.0 | 0.0 | 0.88 | 1.64 | 0.67 | 0.85 | 6.22 | 61600 | 5600 | 800 | 0 | 1600 | 0 | 0 | logfile |
✔ | 7LQF | 23484 | 2023-12-07 | 2021-02-13 | 3.8 | 3.13 | — | 4.0 | 0.016 | 1.46 | 0.0 | 0.03 | 18.37 | 0.00 | 2.258 | 22.81 | 2.08 | 0.0 | 100.0 | 0.0 | -4.77 | 0.59 | 0.78 | 4.63 | 3.2 | 0.154 | 6.37 | 244.0 | 0.42 | 26.01 | 0.03 | 1.685 | 217.72 | 5.21 | 66.8 | 30.1 | 3.1 | -9.48 | 1.76 | 0.69 | 0.86 | 2.78 | 5376 | 512 | 64 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LQE | 23483 | 2023-12-08 | 2021-02-13 | 3.4 | 3.06 | — | 3.4 | 0.016 | 1.42 | 0.0 | 0.04 | 20.72 | 0.00 | 2.423 | 23.27 | 14.58 | 0.0 | 100.0 | 0.0 | -5.94 | 0.57 | 0.80 | 5.06 | 3.2 | 0.151 | 5.20 | 240.0 | 0.38 | 25.46 | 0.02 | 1.745 | 134.94 | 4.40 | 60.8 | 38.2 | 1.0 | -8.67 | 1.67 | 0.65 | 0.89 | 2.25 | 6048 | 576 | 72 | 0 | 0 | 0 | 0 | logfile |
✔ | 7K0S | 22615 | 2023-12-09 | 2020-09-05 | 4.5 | 4.73 | 4.68 | 4.6 | 0.003 | 0.64 | 2.0 | 0.04 | 14.04 | 0.00 | 2.069 | 9.69 | 0.95 | 7.8 | 92.0 | 0.2 | -0.12 | 0.80 | 0.73 | — | 4.6 | 0.043 | 3.17 | 223.0 | 0.13 | 17.19 | 0.02 | 1.395 | 136.01 | 0.02 | 44.5 | 52.1 | 3.4 | -7.53 | 2.27 | 0.84 | 0.82 | — | 115935 | 12896 | 8 | 0 | 3557 | 0 | 0 | logfile |
✔ | 8DST | 27688 | 2023-12-07 | 2022-07-22 | 3.2 | 2.71 | 2.73 | 3.4 | 0.046 | 2.10 | 0.0 | 0.03 | 22.27 | 0.00 | 2.205 | 41.47 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.44 | 0.57 | — | 2.4 | 0.136 | 9.30 | 191.0 | 0.34 | 28.93 | 0.03 | 1.065 | 133.79 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.16 | 0.55 | 0.80 | — | 3078 | 0 | 54 | 0 | 270 | 0 | 0 | logfile |
✔ | 7LQH | 23486 | 2023-12-09 | 2021-02-13 | 3.4 | 3.12 | — | 3.4 | 0.016 | 1.42 | 0.0 | 0.04 | 20.72 | 0.00 | 2.098 | 31.15 | 14.58 | 0.0 | 100.0 | 0.0 | -5.94 | 0.59 | 0.80 | 5.83 | 3.2 | 0.111 | 4.25 | 190.0 | 0.31 | 24.04 | 0.02 | 1.610 | 112.99 | 4.28 | 40.1 | 59.5 | 0.3 | -8.01 | 3.50 | 0.66 | 0.87 | 3.32 | 12096 | 1152 | 144 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LQG | 23485 | 2023-12-09 | 2021-02-13 | 3.4 | 3.13 | — | 3.3 | 0.016 | 1.42 | 0.0 | 0.04 | 20.72 | 0.00 | 1.842 | 31.02 | 14.58 | 0.0 | 100.0 | 0.0 | -5.94 | 0.61 | 0.81 | 5.57 | 3.1 | 0.110 | 4.37 | 186.0 | 0.30 | 23.67 | 0.02 | 1.819 | 120.04 | 3.70 | 35.6 | 64.4 | 0.0 | -8.04 | 1.65 | 0.66 | 0.86 | 3.86 | 12096 | 1152 | 144 | 0 | 0 | 0 | 0 | logfile |
✔ | 7T6E | 25714 | 2023-12-07 | 2021-12-13 | 3.1 | 3.11 | — | 3.1 | 0.129 | 5.90 | 125.0 | 0.23 | 23.20 | 0.02 | 2.041 | 30.29 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.60 | 0.87 | — | 3.1 | 0.122 | 5.61 | 134.0 | 0.36 | 21.80 | 0.02 | 2.082 | 31.46 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.19 | 0.66 | 0.90 | — | 3480 | 0 | 60 | 0 | 300 | 0 | 0 | logfile |
✔ | 6BWi | 7299 | 2023-12-13 | 2017-12-15 | 3.7 | 3.76 | — | 3.7 | 0.011 | 1.39 | 4.0 | 0.09 | 12.18 | 0.01 | 1.745 | 22.56 | 1.36 | 8.1 | 91.5 | 0.4 | -5.08 | 0.67 | 0.73 | 2.06 | 3.7 | 0.089 | 4.98 | 122.0 | 0.27 | 22.17 | 0.03 | 1.601 | 112.52 | 5.39 | 44.5 | 49.2 | 6.3 | -8.59 | 2.58 | 0.80 | 0.86 | 1.95 | 23491 | 2484 | 8 | 0 | 813 | 0 | 0 | logfile |
✔ | 8oKR | 16930 | 2023-12-07 | 2023-03-29 | 2.86 | 3.36 | 2.66 | 3.4 | 0.007 | 1.56 | 0.0 | 0.09 | 22.91 | 0.01 | 1.489 | 4.96 | 0.00 | 0.0 | 100.0 | 0.0 | -4.51 | 0.55 | 0.67 | 7.31 | 3.4 | 0.191 | 6.68 | 64.0 | 0.43 | 28.26 | 0.04 | 1.558 | 166.46 | 10.71 | 46.7 | 40.0 | 13.3 | -7.58 | 2.35 | 0.64 | 0.88 | 1.62 | 1608 | 168 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 6S8F | 10120 | 2023-12-16 | 2019-07-09 | 4.0 | 4.88 | — | 3.9 | 0.007 | 1.26 | 0.0 | 0.06 | 11.79 | 0.01 | 1.859 | 6.71 | 0.80 | 9.6 | 90.3 | 0.1 | -4.38 | 0.88 | 0.77 | — | 3.9 | 0.042 | 2.94 | 52.0 | 0.11 | 17.97 | 0.02 | 1.498 | 186.50 | 4.69 | 52.9 | 44.6 | 2.5 | -8.01 | 2.39 | 0.90 | 0.88 | — | 33664 | 3530 | 4 | 0 | 1616 | 0 | 0 | logfile |
✔ | 7X7M | 33041 | 2023-12-12 | 2022-03-09 | 2.33 | 2.38 | 2.34 | 2.3 | 0.007 | 0.72 | 13.0 | 0.05 | 17.99 | 0.01 | 2.256 | 4.82 | 2.56 | 2.6 | 97.4 | 0.0 | 2.72 | 0.78 | 0.86 | 3.51 | 2.3 | 0.005 | 0.68 | 43.0 | 0.05 | 18.55 | 0.01 | 2.159 | 4.43 | 2.97 | 2.6 | 97.4 | 0.0 | 2.53 | 0.52 | 0.80 | 0.88 | 3.58 | 70620 | 9240 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 8B3A | 15824 | 2023-12-07 | 2022-09-16 | 3.8 | 3.66 | 2.91 | 4.1 | 0.122 | 1.89 | 0.0 | 0.10 | 27.06 | 0.09 | 2.613 | 1.89 | 0.00 | 0.0 | 100.0 | 0.0 | -4.71 | 0.55 | 0.64 | 5.18 | 4.1 | 0.078 | 6.51 | 29.0 | 0.43 | 19.99 | 0.05 | 1.652 | 313.51 | 3.81 | 47.3 | 8.0 | 44.7 | -10.72 | 2.68 | 0.43 | 0.58 | 2.94 | 2010 | 210 | 30 | 0 | 60 | 0 | 0 | logfile |
✔ | 8CEU | 16613 | 2023-12-15 | 2023-02-02 | 1.83 | 1.74 | 1.82 | 1.7 | 0.009 | 1.57 | 16.0 | 0.11 | 21.73 | 0.03 | 1.830 | 0.53 | 0.65 | 2.7 | 97.2 | 0.0 | -1.11 | 0.79 | 0.85 | 6.99 | 1.7 | 0.005 | 0.93 | 16.0 | 0.05 | 22.12 | 0.01 | 1.797 | 4.66 | 0.37 | 2.0 | 98.0 | 0.0 | -0.28 | 0.77 | 0.84 | 0.89 | 6.84 | 92838 | 3076 | 79 | 2872 | 304 | 6830 | 0 | logfile |
✔ | 7ZMA | 14793 | 2023-12-11 | 2022-04-19 | 2.9 | 3.20 | 3.03 | 3.2 | 0.003 | 0.89 | 11.0 | 0.17 | 12.20 | 0.00 | 2.013 | 4.62 | 0.00 | 5.5 | 94.5 | 0.0 | -0.24 | 0.64 | 0.73 | 3.49 | 3.2 | 0.004 | 0.90 | 12.0 | 0.17 | 15.37 | 0.01 | 1.901 | 7.07 | 1.11 | 6.6 | 93.4 | 0.0 | -0.20 | 0.62 | 0.68 | 0.78 | 3.62 | 18816 | 1214 | 2 | 0 | 0 | 0 | 9332 | logfile |
✔ | 7UUQ | 26800 | 2023-12-07 | 2022-04-28 | 3.1 | 3.45 | 2.98 | 3.3 | 0.018 | 1.82 | 0.0 | 0.06 | 18.29 | 0.01 | 1.865 | 20.35 | 0.00 | 0.0 | 100.0 | 0.0 | -9.31 | 0.68 | 0.85 | 2.95 | 3.3 | 0.118 | 4.56 | 11.0 | 0.23 | 30.56 | 0.02 | 1.630 | 55.02 | 2.47 | 64.9 | 32.1 | 3.0 | -10.63 | 0.67 | 0.73 | 0.90 | 3.19 | 4760 | 364 | 98 | 0 | 98 | 0 | 0 | logfile |
✔ | 8CY7 | 27069 | 2023-12-08 | 2022-05-23 | 2.9 | 3.84 | 3.06 | 3.3 | 0.003 | 0.76 | 10.0 | 0.17 | 13.02 | 0.00 | 2.018 | 5.28 | 0.26 | 3.7 | 96.1 | 0.1 | 0.96 | 0.83 | 0.76 | 2.16 | 3.3 | 0.003 | 0.77 | 10.0 | 0.17 | 12.99 | 0.00 | 1.986 | 7.99 | 0.66 | 5.0 | 94.9 | 0.1 | 0.39 | 1.22 | 0.84 | 0.79 | 2.39 | 54932 | 3513 | 21 | 0 | 74 | 0 | 26549 | logfile |
✔ | 7URT | 26718 | 2023-12-07 | 2022-04-22 | 2.39 | 2.51 | 2.52 | 2.5 | 0.008 | 0.96 | 0.0 | 0.07 | 13.99 | 0.01 | 0.512 | 6.62 | 1.60 | 0.9 | 99.1 | 0.0 | 1.22 | 0.71 | 0.82 | 4.21 | 2.5 | 0.038 | 3.42 | 10.0 | 0.29 | 25.44 | 0.01 | 0.460 | 10.66 | 1.28 | 1.5 | 98.5 | 0.0 | 1.89 | 1.11 | 0.69 | 0.81 | 2.66 | 107880 | 13260 | 60 | 0 | 120 | 0 | 0 | logfile |
✔ | 8G2J | 29679 | 2023-12-16 | 2023-02-04 | 3.3 | 3.77 | 3.27 | 3.7 | 0.007 | 0.72 | 6.0 | 0.07 | 11.59 | 0.00 | 2.018 | 8.71 | 0.59 | 4.7 | 95.1 | 0.2 | 1.19 | 0.59 | 0.75 | 1.81 | 3.7 | 0.003 | 0.63 | 6.0 | 0.07 | 14.95 | 0.00 | 1.939 | 10.50 | 0.38 | 5.6 | 94.2 | 0.1 | 0.94 | 1.51 | 0.62 | 0.81 | 2.04 | 34401 | 2157 | 9 | 0 | 21 | 0 | 16852 | logfile |
✔ | 7LQi | 23487 | 2023-12-08 | 2021-02-13 | 3.5 | 3.92 | — | 3.9 | 0.016 | 1.40 | 0.0 | 0.03 | 20.42 | 0.00 | 2.242 | 22.86 | 5.00 | 0.0 | 100.0 | 0.0 | -3.42 | 0.62 | 0.78 | 4.80 | 3.9 | 0.051 | 2.84 | 5.0 | 0.14 | 22.95 | 0.01 | 1.918 | 120.77 | 3.33 | 46.5 | 53.5 | 0.0 | -7.05 | 1.54 | 0.65 | 0.83 | 2.52 | 8400 | 800 | 100 | 0 | 0 | 0 | 0 | logfile |