The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7LVT | 23542 | 2023-12-11 | 2021-02-26 | 4.6 | 4.32 | — | 4.0 | 0.008 | 1.36 | 3.0 | 0.09 | 13.04 | 0.01 | 2.057 | 6.40 | 0.96 | 6.4 | 93.3 | 0.3 | -2.96 | 0.68 | 0.65 | — | 3.8 | 0.003 | 0.71 | 0.0 | 0.04 | 12.92 | 0.00 | 2.206 | 12.08 | 0.00 | 5.2 | 94.6 | 0.1 | 0.10 | 16.93 | 0.56 | 0.46 | — | 18944 | 2876 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8HiA | 34813 | 2023-12-08 | 2022-11-19 | 4.9 | 4.49 | 2.13 | 9.6 | 0.001 | 0.36 | 0.0 | 0.05 | 15.83 | 0.00 | 2.251 | 1.11 | 2.86 | 12.1 | 87.6 | 0.2 | -4.39 | 0.47 | 0.07 | — | 9.3 | 0.006 | 0.76 | 0.0 | 0.05 | 13.94 | 0.01 | 2.113 | 35.97 | 4.76 | 9.5 | 90.5 | 0.0 | -6.92 | 12.60 | 0.69 | 0.30 | — | 7200 | 460 | 20 | 0 | 0 | 0 | 3660 | logfile |
✔ | 7ZTD | 14958 | 2023-12-13 | 2022-05-09 | 4.6 | 4.11 | 4.55 | 4.3 | 0.007 | 1.04 | 0.0 | 0.06 | 15.69 | 0.01 | 2.097 | 8.15 | 0.00 | 5.4 | 94.6 | 0.0 | -2.32 | 0.70 | 0.80 | — | 4.4 | 0.003 | 0.68 | 0.0 | 0.04 | 13.92 | 0.00 | 2.049 | 9.84 | 0.00 | 4.9 | 95.1 | 0.0 | 0.37 | 10.50 | 0.68 | 0.78 | — | 25740 | 2928 | 20 | 0 | 548 | 0 | 0 | logfile |
✔ | 7U13 | 26276 | 2023-12-07 | 2022-02-19 | 2.9 | 3.67 | — | 4.2 | 0.018 | 2.43 | 0.0 | 0.07 | 19.23 | 0.01 | 2.120 | 29.95 | 6.30 | 11.3 | 88.0 | 0.8 | -3.06 | 0.30 | 0.47 | 1.37 | 4.2 | 0.005 | 1.06 | 0.0 | 0.06 | 17.56 | 0.00 | 2.164 | 17.39 | 4.46 | 12.5 | 87.5 | 0.0 | -4.15 | 6.83 | 0.33 | 0.57 | 1.53 | 3456 | 405 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 7JSH | 22454 | 2023-12-08 | 2020-08-14 | 4.4 | 7.07 | — | 17.0 | 0.001 | 0.20 | 0.0 | 0.02 | 8.81 | 0.00 | 2.581 | 0.00 | 0.00 | 13.1 | 83.7 | 3.2 | -3.27 | 0.49 | 0.25 | — | 5.3 | 0.005 | 1.30 | 0.0 | 0.05 | 13.69 | 0.01 | 1.942 | 27.17 | 0.00 | 31.8 | 67.9 | 0.3 | -5.48 | 6.11 | 0.73 | 0.61 | — | 7916 | 1904 | 8 | 15 | 0 | 0 | 0 | logfile |
✔ | 7M9C | 23723 | 2023-12-15 | 2021-03-30 | 4.2 | 4.61 | 3.85 | 4.2 | 0.003 | 0.64 | 4.0 | 0.04 | 15.01 | 0.00 | 1.350 | 9.42 | 0.10 | 2.6 | 97.3 | 0.1 | 0.09 | 0.78 | 0.67 | — | 4.3 | 0.003 | 0.75 | 0.0 | 0.04 | 15.32 | 0.00 | 2.042 | 14.49 | 0.00 | 2.9 | 96.9 | 0.1 | 0.74 | 6.10 | 0.83 | 0.83 | — | 30517 | 3598 | 26 | 66 | 10 | 0 | 0 | logfile |
✔ | 6YW7 | 10960 | 2023-12-07 | 2020-04-29 | 4.5 | 5.21 | — | 4.7 | 0.021 | 3.50 | 0.0 | 0.09 | 8.08 | 0.01 | 2.034 | 2.17 | 0.00 | 4.5 | 94.7 | 0.9 | -1.45 | 0.57 | 0.32 | — | 4.6 | 0.003 | 0.99 | 0.0 | 0.02 | 6.66 | 0.00 | 2.225 | 16.71 | 0.00 | 11.5 | 88.3 | 0.2 | -3.14 | 5.69 | 0.84 | 0.64 | — | 5426 | 1788 | 9 | 0 | 2 | 0 | 0 | logfile |
✔ | 7PZD | 13727 | 2023-12-14 | 2021-10-12 | 3.6 | 3.77 | — | 3.8 | 0.010 | 1.24 | 0.0 | 0.08 | 16.79 | 0.01 | 2.384 | 6.88 | 1.27 | 5.6 | 94.4 | 0.0 | -3.73 | 0.68 | 0.81 | 1.20 | 3.8 | 0.003 | 0.66 | 0.0 | 0.03 | 18.63 | 0.01 | 2.264 | 8.97 | 0.35 | 5.5 | 94.5 | 0.0 | 1.01 | 5.63 | 0.67 | 0.82 | 0.60 | 13644 | 1656 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SAM | 24952 | 2023-12-07 | 2021-09-22 | 4.3 | 6.95 | 4.38 | 4.2 | 0.001 | 0.39 | 0.0 | 0.02 | 22.03 | 0.00 | 1.952 | 2.96 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.84 | 0.51 | — | 4.3 | 0.007 | 0.90 | 0.0 | 0.04 | 27.59 | 0.01 | 1.795 | 82.79 | 0.00 | 0.0 | 0.0 | 0.0 | — | 5.58 | 0.96 | 0.87 | — | 5399 | 0 | 1 | 169 | 0 | 0 | 1802 | logfile |
✔ | 6HDD | 0204 | 2023-12-14 | 2018-08-17 | 4.5 | 5.28 | — | 4.4 | 0.009 | 1.36 | 3.0 | 0.08 | 12.60 | 0.01 | 2.220 | 12.08 | 1.07 | 18.3 | 81.6 | 0.1 | -6.11 | 0.74 | 0.42 | — | 8.5 | 0.005 | 1.07 | 0.0 | 0.05 | 13.67 | 0.01 | 1.438 | 29.15 | 0.00 | 16.5 | 83.1 | 0.4 | -3.27 | 5.54 | 0.87 | 0.54 | — | 28154 | 3605 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 5VHY | 8687 | 2023-12-14 | 2017-04-13 | 4.6 | 4.98 | — | 4.7 | 0.007 | 1.12 | 0.0 | 0.04 | 8.41 | 0.01 | 1.831 | 19.00 | 0.17 | 5.2 | 93.0 | 1.8 | -1.87 | 0.77 | 0.64 | — | 4.7 | 0.003 | 0.62 | 0.0 | 0.04 | 11.43 | 0.00 | 2.077 | 15.60 | 0.00 | 4.8 | 94.9 | 0.4 | 0.91 | 5.53 | 0.84 | 0.84 | — | 27572 | 3484 | 10 | 0 | 8 | 0 | 0 | logfile |
✔ | 7Uo0 | 26636 | 2023-12-09 | 2022-04-12 | 3.4 | 4.47 | — | 3.5 | 0.003 | 2.23 | 0.0 | 0.11 | 29.51 | 0.00 | 2.117 | 7.29 | 2.04 | 6.4 | 93.6 | 0.0 | -0.20 | 0.73 | 0.34 | 1.64 | 3.5 | 0.005 | 0.96 | 0.0 | 0.05 | 30.60 | 0.01 | 2.095 | 29.77 | 0.00 | 10.0 | 90.0 | 0.0 | -3.66 | 5.13 | 0.84 | 0.63 | 1.93 | 10697 | 112 | 4 | 455 | 7 | 0 | 0 | logfile |
✔ | 7QKZ | 14058 | 2023-12-07 | 2021-12-19 | 2.65 | 2.79 | 2.28 | 3.2 | 0.013 | 2.86 | 9.0 | 0.34 | 18.75 | 0.02 | 2.498 | 0.59 | 0.00 | 9.9 | 90.1 | 0.0 | -1.61 | 0.34 | 0.61 | 7.02 | 3.3 | 0.006 | 1.51 | 0.0 | 0.38 | 18.97 | 0.01 | 2.249 | 14.18 | 0.00 | 1.2 | 98.8 | 0.0 | -0.83 | 5.07 | 0.34 | 0.64 | 6.93 | 1701 | 99 | 9 | 0 | 0 | 0 | 891 | logfile |
✔ | 6EBK | 9024 | 2023-12-12 | 2018-08-06 | 3.3 | 3.33 | — | 3.2 | 0.012 | 1.29 | 0.0 | 0.07 | 10.86 | 0.01 | 2.049 | 6.69 | 0.13 | 3.8 | 96.2 | 0.0 | -4.63 | 0.70 | 0.76 | 2.95 | 3.2 | 0.003 | 0.80 | 2.0 | 0.04 | 14.67 | 0.00 | 2.119 | 13.04 | 0.27 | 3.0 | 97.0 | 0.0 | -0.42 | 4.81 | 0.76 | 0.88 | 2.41 | 22212 | 2848 | 20 | 0 | 4 | 128 | 0 | logfile |
✔ | 7JoA | 22409 | 2023-12-10 | 2020-08-06 | 3.3 | 3.05 | — | 3.2 | 0.009 | 0.78 | 0.0 | 0.04 | 25.95 | 0.01 | 2.206 | 6.32 | 0.00 | 6.5 | 93.5 | 0.0 | -0.33 | 0.79 | 0.82 | 1.49 | 3.2 | 0.004 | 0.59 | 0.0 | 0.04 | 26.11 | 0.00 | 2.205 | 6.14 | 0.31 | 2.5 | 97.5 | 0.0 | 1.84 | 4.78 | 0.82 | 0.87 | 1.50 | 14994 | 1125 | 11 | 290 | 1 | 0 | 0 | logfile |
✔ | 6N1H | 8902 | 2023-12-09 | 2018-11-08 | 3.17 | 3.22 | — | 3.2 | 0.006 | 1.13 | 0.0 | 0.06 | 12.23 | 0.01 | 0.657 | 32.07 | 3.97 | 7.4 | 92.6 | 0.0 | -7.22 | 0.39 | 0.46 | 0.05 | 3.2 | 0.003 | 0.74 | 0.0 | 0.04 | 17.47 | 0.00 | 2.143 | 11.92 | 2.70 | 7.2 | 92.8 | 0.0 | 1.00 | 4.76 | 0.63 | 0.84 | 1.82 | 10991 | 1328 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RTM | 24683 | 2023-12-08 | 2021-08-13 | 3.4 | 3.54 | 3.61 | 20.0 | 0.031 | 3.05 | 44.0 | 0.18 | 16.56 | 0.03 | 1.051 | 1.40 | 2.80 | 6.8 | 93.0 | 0.3 | -1.12 | 0.10 | 0.04 | 0.21 | 3.5 | 0.004 | 0.83 | 0.0 | 0.04 | 15.79 | 0.00 | 2.119 | 11.39 | 0.40 | 5.5 | 94.4 | 0.1 | 0.27 | 4.69 | 0.66 | 0.77 | 1.44 | 9161 | 1142 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 7WTD | 32779 | 2023-12-14 | 2022-02-04 | 3.9 | 5.03 | — | 4.3 | 0.023 | 1.20 | 1.0 | 0.05 | 15.55 | 0.01 | 0.990 | 21.59 | 1.15 | 7.3 | 92.6 | 0.1 | -0.88 | 0.81 | 0.61 | 0.10 | 4.4 | 0.004 | 0.94 | 1.0 | 0.05 | 16.56 | 0.01 | 2.083 | 25.45 | 0.42 | 8.2 | 91.8 | 0.1 | -1.39 | 4.65 | 0.85 | 0.72 | 0.20 | 27137 | 3491 | 6 | 0 | 4 | 0 | 0 | logfile |
✔ | 8D6X | 27225 | 2023-12-11 | 2022-06-06 | 3.2 | 10.22 | — | — | 0.003 | 0.62 | 0.0 | 0.04 | 12.14 | 0.00 | 2.195 | 17.76 | 0.06 | 2.6 | 97.4 | 0.0 | 1.17 | 0.70 | 0.42 | 0.14 | — | 0.003 | 0.68 | 0.0 | 0.04 | 14.52 | 0.00 | 2.006 | 31.08 | 0.17 | 4.9 | 95.1 | 0.0 | 0.20 | 4.65 | 0.78 | 0.54 | 0.09 | 68362 | 8957 | 41 | 0 | 0 | 0 | 0 | logfile |
✔ | 8A7Q | 15224 | 2023-12-08 | 2022-06-21 | 2.8 | 3.63 | 2.72 | 3.4 | 0.004 | 0.67 | 0.0 | 0.05 | 11.64 | 0.00 | 2.197 | 7.83 | 0.00 | 3.2 | 96.8 | 0.0 | -5.05 | 0.45 | 0.75 | 5.43 | 3.4 | 0.005 | 1.12 | 0.0 | 0.05 | 15.74 | 0.00 | 2.145 | 19.36 | 3.42 | 11.0 | 89.0 | 0.0 | -5.00 | 4.62 | 0.41 | 0.76 | 3.48 | 6492 | 768 | 12 | 0 | 0 | 0 | 0 | logfile |