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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 6UXA | 20931 | 2023-07-05 | 2019-11-07 | 4.5 | 5.05 | — | 6.0 | 0.005 | 0.77 | 0.0 | 0.06 | 4.56 | 0.00 | 2.628 | 0.00 | 0.00 | 3.8 | 96.2 | 0.0 | -2.56 | 0.71 | 0.63 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10344 | 2104 | 8 | 0 | 0 | 0 | 0 | logfile |
✘ | 6UXB | 20932 | 2023-07-05 | 2019-11-07 | 4.9 | 5.50 | — | 6.0 | 0.005 | 0.77 | 0.0 | 0.06 | 4.56 | 0.00 | 2.627 | 0.00 | 0.00 | 3.8 | 96.2 | 0.0 | -2.56 | 0.74 | 0.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10344 | 2104 | 8 | 0 | 0 | 0 | 0 | logfile |
✘ | 7TLB | 25986 | 2023-07-11 | 2022-01-18 | 3.06 | 3.26 | — | 3.2 | 0.012 | 1.74 | 1.0 | 0.09 | 13.14 | 0.01 | 2.531 | 0.11 | 0.82 | 5.3 | 94.7 | 0.1 | -1.00 | 0.54 | 0.56 | 2.31 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22806 | 2916 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 7KE9 | 22835 | 2023-07-10 | 2020-10-10 | 3.08 | 3.62 | — | 3.5 | 0.013 | 1.74 | 0.0 | 0.09 | 12.23 | 0.01 | 2.491 | 0.11 | 0.04 | 5.8 | 94.0 | 0.2 | -0.81 | 0.80 | 0.80 | 4.06 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22365 | 2875 | 18 | 0 | 59 | 0 | 0 | logfile |
✘ | 7LWJ | 23547 | 2023-07-11 | 2021-03-01 | 3.24 | 3.45 | — | 3.3 | 0.014 | 1.83 | 2.0 | 0.10 | 13.55 | 0.01 | 2.482 | 0.34 | 0.84 | 7.0 | 92.8 | 0.2 | -1.78 | 0.70 | 0.68 | 1.83 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 23840 | 3003 | 6 | 0 | 30 | 0 | 0 | logfile |
✘ | 7PMN | 13539 | 2023-07-12 | 2021-09-02 | 3.2 | 3.93 | — | 3.5 | 0.007 | 0.94 | 0.0 | 0.05 | 14.26 | 0.01 | 1.984 | 0.34 | 0.55 | 2.9 | 97.1 | 0.0 | -0.35 | 0.79 | 0.71 | 2.00 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 74640 | 9131 | 28 | 67 | 11 | 0 | 0 | logfile |
✘ | 6oLL | 20116 | 2023-07-10 | 2019-04-16 | 4.1 | 4.59 | — | 4.4 | 0.004 | 1.05 | 0.0 | 0.06 | 6.94 | 0.01 | 2.400 | 0.40 | 0.00 | 2.0 | 97.8 | 0.2 | -0.51 | 0.67 | 0.58 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10426 | 2114 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 7MN5 | 23916 | 2023-07-05 | 2021-04-30 | 2.93 | 3.53 | 3.04 | 3.3 | 0.013 | 1.46 | 0.0 | 0.08 | 10.99 | 0.01 | 2.311 | 0.48 | 0.00 | 3.3 | 96.7 | 0.0 | -0.05 | 0.82 | 0.81 | 3.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9526 | 1213 | 8 | 0 | 13 | 0 | 0 | logfile |
✘ | 7PFo | 13375 | 2023-07-09 | 2021-08-11 | 3.2 | 4.02 | 3.48 | 3.1 | 0.007 | 1.03 | 0.0 | 0.06 | 14.55 | 0.01 | 2.051 | 0.51 | 1.37 | 3.3 | 96.6 | 0.0 | -0.83 | 0.80 | 0.77 | 2.52 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 68086 | 8367 | 29 | 54 | 13 | 0 | 0 | logfile |
✘ | 8G3V | 29710 | 2023-07-09 | 2023-02-08 | 2.2 | 2.84 | 2.21 | 2.7 | 0.014 | 1.61 | 4.0 | 0.09 | 13.68 | 0.01 | 2.257 | 0.54 | 0.00 | 3.9 | 95.8 | 0.3 | -0.74 | 0.83 | 0.93 | 6.59 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20045 | 2500 | 28 | 0 | 61 | 0 | 0 | logfile |
✘ | 8F0A | 28754 | 2023-07-09 | 2022-11-02 | 2.6 | 3.77 | 2.61 | 3.4 | 0.031 | 1.77 | 0.0 | 0.13 | 9.86 | 0.01 | 2.388 | 0.56 | 0.00 | 0.8 | 99.2 | 0.0 | 0.72 | 0.68 | 0.66 | 4.15 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18060 | 1212 | 9 | 0 | 0 | 0 | 9189 | logfile |
✘ | 6VL6 | 21231 | 2023-07-10 | 2020-01-22 | 4.6 | 5.00 | 4.54 | 4.6 | 0.019 | 1.46 | 0.0 | 0.09 | 11.38 | 0.01 | 2.431 | 0.59 | 0.00 | 0.9 | 99.1 | 0.0 | 0.45 | 0.87 | 0.83 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21504 | 2640 | 24 | 0 | 0 | 0 | 0 | logfile |
✘ | 6ZJA | 11233 | 2023-07-13 | 2020-06-28 | 2.0 | 2.10 | 2.09 | 2.1 | 0.006 | 0.86 | 0.0 | 0.06 | 14.14 | 0.01 | 1.974 | 0.60 | 1.37 | 4.1 | 95.9 | 0.0 | -0.40 | 0.79 | 0.87 | 6.97 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 77951 | 9684 | 60 | 0 | 36 | 3191 | 0 | logfile |
✘ | 7S6L | 24879 | 2023-07-11 | 2021-09-14 | 4.0 | 4.77 | 4.03 | 4.2 | 0.020 | 1.74 | 0.0 | 0.11 | 10.10 | 0.01 | 2.336 | 0.63 | 0.04 | 2.2 | 97.8 | 0.0 | 0.74 | 0.84 | 0.73 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24755 | 3117 | 15 | 0 | 30 | 0 | 0 | logfile |
✘ | 6VL5 | 21230 | 2023-07-07 | 2020-01-22 | 4.5 | 4.57 | 4.20 | 4.4 | 0.019 | 1.72 | 0.0 | 0.10 | 10.23 | 0.01 | 2.242 | 0.64 | 0.20 | 1.2 | 98.8 | 0.0 | 0.88 | 0.79 | 0.80 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15039 | 1719 | 42 | 0 | 105 | 0 | 0 | logfile |
✘ | 6GDG | 4390 | 2023-07-04 | 2018-04-23 | 4.11 | 3.92 | — | 4.0 | 0.008 | 1.10 | 0.0 | 0.06 | 12.81 | 0.00 | 2.449 | 0.87 | 2.07 | 4.9 | 94.6 | 0.5 | -3.15 | 0.76 | 0.78 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7223 | 997 | 6 | 0 | 1 | 0 | 0 | logfile |
✘ | 7X6Q | 33025 | 2023-07-06 | 2022-03-08 | 4.5 | 4.41 | 4.61 | 4.3 | 0.009 | 0.73 | 0.0 | 0.06 | 9.96 | 0.00 | 2.197 | 0.93 | 0.01 | 3.2 | 96.7 | 0.2 | -0.87 | 0.78 | 0.71 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 64472 | 8440 | 16 | 0 | 0 | 0 | 0 | logfile |
✘ | 6VWK | 21419 | 2023-07-04 | 2020-02-20 | 3.3 | 3.56 | — | 3.5 | 0.010 | 1.30 | 4.0 | 0.07 | 12.71 | 0.01 | 2.355 | 0.98 | 0.59 | 0.9 | 99.1 | 0.0 | -0.35 | 0.65 | 0.83 | 2.71 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8423 | 1133 | 13 | 0 | 0 | 0 | 0 | logfile |
✘ | 6oVH | 20212 | 2023-07-05 | 2019-05-07 | 2.6 | 2.81 | 2.71 | 2.8 | 0.014 | 1.10 | 0.0 | 0.04 | 17.48 | 0.01 | 1.203 | 1.15 | 4.55 | 1.0 | 99.0 | 0.0 | -6.34 | 0.75 | 0.87 | 4.63 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10895 | 1272 | 36 | 0 | 68 | 171 | 0 | logfile |
✘ | 7DK4 | 30702 | 2023-07-16 | 2020-11-23 | 3.8 | 3.20 | — | 3.4 | 0.003 | 0.55 | 0.0 | 0.04 | 7.92 | 0.00 | 2.106 | 1.33 | 0.15 | 2.8 | 97.2 | 0.0 | -3.26 | 0.58 | 0.47 | 1.13 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 34707 | 4470 | 9 | 0 | 0 | 0 | 0 | logfile |