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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 8H0X | 34417 | 2023-07-12 | 2022-09-30 | 2.57 | 2.80 | 2.62 | 2.7 | 0.008 | 0.93 | 0.0 | 0.06 | 12.74 | 0.01 | 2.257 | 1.76 | 1.11 | 3.3 | 96.7 | 0.0 | -0.82 | 0.81 | 0.86 | 3.97 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25122 | 3117 | 6 | 0 | 48 | 0 | 0 | logfile |
✘ | 7XYA | 33515 | 2023-07-12 | 2022-06-01 | 3.3 | 3.39 | 3.24 | 3.2 | 0.004 | 0.68 | 1.0 | 0.04 | 18.79 | 0.00 | 1.962 | 11.59 | 1.00 | 4.0 | 95.9 | 0.0 | -0.19 | 0.81 | 0.84 | 1.75 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 26550 | 3479 | 11 | 126 | 1 | 0 | 0 | logfile |
✘ | 7oGR | 12886 | 2023-07-07 | 2021-05-07 | 3.0 | 3.10 | 2.89 | 3.1 | 0.003 | 0.69 | 0.0 | 0.05 | 13.65 | 0.01 | 2.309 | 3.41 | 0.00 | 5.2 | 94.8 | 0.0 | -4.69 | 0.68 | 0.80 | 2.46 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14135 | 1775 | 7 | 0 | 1 | 0 | 0 | logfile |
✘ | 7CQ7 | 30438 | 2023-07-07 | 2020-08-08 | 3.55 | 3.95 | — | 4.0 | 0.008 | 1.07 | 0.0 | 0.06 | 10.33 | 0.01 | 1.915 | 5.84 | 0.07 | 9.3 | 90.7 | 0.0 | -4.47 | 0.39 | 0.42 | 0.13 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13810 | 1766 | 8 | 0 | 9 | 0 | 0 | logfile |
✘ | 7DoK | 30795 | 2023-07-06 | 2020-12-14 | 2.73 | 2.84 | — | 2.9 | 0.009 | 1.01 | 0.0 | 0.07 | 13.35 | 0.01 | 1.695 | 5.72 | 0.60 | 2.4 | 97.6 | 0.0 | -2.40 | 0.71 | 0.85 | 3.23 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11534 | 1323 | 8 | 44 | 9 | 2 | 0 | logfile |
✘ | 7EVY | 31341 | 2023-07-06 | 2021-05-24 | 2.98 | 3.64 | — | 3.6 | 0.017 | 0.62 | 0.0 | 0.16 | 12.41 | 0.00 | 2.061 | 8.83 | 0.91 | 3.1 | 96.9 | 0.0 | -1.68 | 0.58 | 0.77 | 2.30 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9024 | 1144 | 6 | 0 | 2 | 0 | 0 | logfile |
✘ | 7SAX | 24958 | 2023-07-03 | 2021-09-23 | 3.0 | 2.60 | 2.97 | 3.0 | 0.007 | 0.66 | 0.0 | 0.04 | 13.54 | 0.00 | 2.174 | 5.46 | 0.00 | 3.3 | 96.7 | 0.0 | 1.22 | 0.58 | 0.85 | 2.70 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 5305 | 689 | 7 | 0 | 0 | 0 | 0 | logfile |
✘ | 6VoY | 21301 | 2023-07-08 | 2020-02-01 | 3.7 | 4.09 | — | 4.0 | 0.013 | 1.52 | 30.0 | 0.10 | 24.39 | 0.01 | 1.583 | 35.03 | 0.46 | 2.4 | 97.6 | 0.0 | -6.32 | 0.69 | 0.82 | 2.12 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17556 | 1724 | 16 | 180 | 6 | 0 | 0 | logfile |
✘ | 7ZG7 | 14705 | 2023-07-17 | 2022-04-02 | 1.77 | 1.79 | 1.79 | 1.8 | 0.004 | 0.74 | 0.0 | 0.04 | 14.44 | 0.01 | 1.952 | 3.06 | 0.00 | 1.8 | 98.2 | 0.0 | 3.49 | 0.77 | 0.86 | 9.05 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 39086 | 4128 | 72 | 0 | 382 | 2680 | 0 | logfile |
✘ | 7EVZ | 31342 | 2023-07-06 | 2021-05-24 | 3.07 | 3.81 | — | 3.7 | 0.004 | 0.58 | 0.0 | 0.04 | 13.30 | 0.00 | 2.160 | 7.10 | 0.30 | 3.2 | 96.8 | 0.0 | -1.99 | 0.54 | 0.75 | 1.86 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9078 | 1144 | 6 | 0 | 5 | 0 | 0 | logfile |
✘ | 6WB0 | 21583 | 2023-07-04 | 2020-03-26 | 4.2 | 4.26 | — | 4.2 | 0.002 | 0.51 | 0.0 | 0.04 | 11.69 | 0.00 | 2.131 | 11.89 | 0.81 | 4.1 | 95.9 | 0.0 | -4.46 | 0.79 | 0.74 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8518 | 948 | 4 | 77 | 0 | 0 | 0 | logfile |
✘ | 7VNC | 32038 | 2023-07-14 | 2021-10-10 | 3.7 | 3.77 | — | 3.7 | 0.009 | 0.77 | 0.0 | 0.05 | 14.16 | 0.00 | 2.149 | 9.92 | 0.00 | 6.4 | 93.6 | 0.0 | -2.21 | 0.64 | 0.71 | 1.93 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 26716 | 3325 | 22 | 0 | 51 | 0 | 0 | logfile |
✘ | 7WF7 | 32461 | 2023-07-04 | 2021-12-26 | 3.4 | 3.19 | — | 3.2 | 0.004 | 0.83 | 0.0 | 0.05 | 13.56 | 0.00 | 2.288 | 2.88 | 0.00 | 4.4 | 95.6 | 0.0 | -1.14 | 0.55 | 0.64 | 1.44 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8136 | 1034 | 6 | 0 | 1 | 0 | 0 | logfile |
✘ | 6WCZ | 21618 | 2023-07-05 | 2020-03-31 | 4.0 | 4.24 | — | 4.0 | 0.009 | 1.22 | 0.0 | 0.06 | 12.53 | 0.01 | 2.085 | 14.60 | 2.55 | 12.9 | 87.1 | 0.0 | -4.79 | 0.82 | 0.77 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9894 | 1231 | 2 | 0 | 2 | 0 | 0 | logfile |
✘ | 8EFQ | 28088 | 2023-07-04 | 2022-09-08 | 3.3 | 3.58 | 3.24 | 3.6 | 0.004 | 0.81 | 0.0 | 0.05 | 8.64 | 0.01 | 2.298 | 3.12 | 0.00 | 1.4 | 98.6 | 0.0 | -1.52 | 0.60 | 0.72 | 1.55 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7046 | 892 | 6 | 0 | 2 | 0 | 0 | logfile |
✘ | 7EW0 | 31343 | 2023-07-06 | 2021-05-24 | 3.42 | 4.10 | — | 4.1 | 0.003 | 0.63 | 0.0 | 0.04 | 14.13 | 0.00 | 2.087 | 6.86 | 0.71 | 2.9 | 97.1 | 0.0 | -1.47 | 0.59 | 0.76 | 1.95 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8987 | 1142 | 6 | 0 | 1 | 0 | 0 | logfile |
✘ | 6oo7 | 20148 | 2023-07-08 | 2019-04-22 | 3.8 | 4.25 | 3.77 | 4.0 | 0.013 | 1.08 | 0.0 | 0.06 | 9.52 | 0.01 | 2.273 | 4.27 | 0.00 | 3.5 | 96.5 | 0.0 | -1.41 | 0.75 | 0.78 | 2.01 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16860 | 2394 | 8 | 0 | 4 | 0 | 0 | logfile |
✘ | 7AHE | 11784 | 2023-07-05 | 2020-09-24 | 4.1 | 4.22 | 4.11 | 4.1 | 0.009 | 1.23 | 0.0 | 0.09 | 12.74 | 0.00 | 2.205 | 16.70 | 0.45 | 9.6 | 90.4 | 0.0 | -5.40 | 0.69 | 0.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10060 | 1308 | 5 | 0 | 1 | 0 | 0 | logfile |
✘ | 6UD3 | 20731 | 2023-07-07 | 2019-09-18 | 3.5 | 4.06 | 3.46 | 3.8 | 0.018 | 1.60 | 0.0 | 0.11 | 11.86 | 0.01 | 2.293 | 7.45 | 0.00 | 4.6 | 95.4 | 0.0 | -1.90 | 0.79 | 0.78 | 1.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14346 | 1765 | 10 | 0 | 6 | 0 | 0 | logfile |
✘ | 7D4P | 30575 | 2023-07-10 | 2020-09-24 | 2.7 | 3.03 | 2.86 | 3.0 | 0.007 | 0.80 | 0.0 | 0.04 | 13.57 | 0.00 | 2.269 | 4.62 | 0.67 | 1.2 | 98.8 | 0.0 | 2.42 | 0.58 | 0.76 | 3.11 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22472 | 2676 | 8 | 0 | 28 | 0 | 0 | logfile |