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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7R42 | 14256 | 2023-10-10 | 2022-02-08 | 2.3 | 2.33 | — | 2.3 | 0.008 | 0.85 | 0.0 | 0.84 | 17.08 | 0.01 | 1.921 | 3.20 | 1.23 | 2.6 | 97.4 | 0.0 | 0.55 | 0.71 | 0.90 | 5.95 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 69480 | 8204 | 114 | 0 | 58 | 1545 | 0 | logfile |
✘ | 7QSL | 14133 | 2023-10-10 | 2022-01-13 | 2.76 | 2.80 | 2.81 | 2.7 | 0.010 | 0.96 | 0.0 | 0.84 | 14.23 | 0.00 | 1.561 | 3.91 | 0.06 | 3.1 | 96.8 | 0.0 | -0.57 | 0.78 | 0.89 | 5.14 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 69734 | 8287 | 109 | 0 | 56 | 1024 | 0 | logfile |
✘ | 7QSK | 14132 | 2023-10-10 | 2022-01-13 | 2.84 | 2.93 | 2.90 | 2.8 | 0.008 | 0.91 | 0.0 | 0.84 | 15.15 | 0.00 | 1.435 | 3.34 | 0.15 | 3.1 | 96.9 | 0.1 | 0.26 | 0.77 | 0.87 | 4.81 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 69987 | 8291 | 116 | 0 | 59 | 1060 | 0 | logfile |
✘ | 7QSN | 14139 | 2023-10-10 | 2022-01-13 | 2.81 | 2.74 | 2.82 | 2.7 | 0.008 | 0.92 | 0.0 | 0.85 | 15.31 | 0.00 | 1.443 | 3.83 | 0.01 | 3.3 | 96.7 | 0.0 | -0.45 | 0.77 | 0.87 | 4.68 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 69320 | 8201 | 116 | 0 | 59 | 1096 | 0 | logfile |
✘ | 7EWQ | 31361 | 2023-10-19 | 2021-05-25 | 3.5 | 3.98 | — | 3.7 | 0.006 | 0.78 | 0.0 | 0.04 | 15.24 | 0.00 | 0.473 | 31.00 | 0.00 | 6.7 | 93.3 | 0.0 | -3.42 | 0.74 | 0.73 | 2.16 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 40144 | 4862 | 26 | 78 | 0 | 0 | 0 | logfile |
✘ | 5N8N | 3600 | 2023-10-10 | 2017-02-23 | 3.28 | 3.38 | — | 3.4 | 0.019 | 1.34 | 0.0 | 0.12 | 11.08 | 0.01 | 1.755 | 21.54 | 0.81 | 4.4 | 95.6 | 0.0 | -2.91 | 0.40 | 0.82 | 2.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 70035 | 8895 | 30 | 0 | 0 | 0 | 0 | logfile |
✘ | 7RBU | 24402 | 2023-10-02 | 2021-07-06 | 3.7 | 2.38 | — | 2.2 | 0.006 | 0.80 | 0.0 | 0.05 | 12.53 | 0.00 | 2.167 | 6.95 | 0.00 | 9.1 | 90.7 | 0.2 | -2.50 | 0.74 | 0.77 | 4.05 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4107 | 510 | 6 | 0 | 7 | 0 | 0 | logfile |
✘ | 5X1G | 6701 | 2023-10-02 | 2017-01-25 | 4.5 | 7.89 | — | 37.0 | 0.008 | 1.42 | 0.0 | 0.05 | 10.05 | 0.01 | 2.345 | 27.78 | 0.00 | 6.9 | 93.1 | 0.0 | -2.75 | 0.00 | 0.01 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 155 | 31 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 7LV0 | 23528 | 2023-10-22 | 2021-02-23 | 3.2 | 3.59 | — | 3.2 | 0.012 | 1.25 | 0.0 | 0.10 | 15.70 | 0.02 | 1.414 | 29.31 | 3.83 | 19.0 | 79.0 | 2.0 | -4.79 | 0.81 | 0.82 | 1.87 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 147330 | 5851 | 60 | 4734 | 0 | 0 | 0 | logfile |
✘ | 8FPJ | 29366 | 2023-10-12 | 2023-01-04 | 2.74 | 2.94 | 2.78 | 3.0 | 0.004 | 0.69 | 0.0 | 0.04 | 14.26 | 0.00 | 2.008 | 5.89 | 0.00 | 5.7 | 94.3 | 0.0 | -0.24 | 0.69 | 0.82 | 2.96 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25960 | 1596 | 6 | 0 | 1 | 0 | 13143 | logfile |
✘ | 6oDi | 20020 | 2023-10-10 | 2019-03-26 | 3.8 | 3.96 | — | 3.9 | 0.008 | 0.98 | 0.0 | 0.07 | 14.95 | 0.01 | 2.406 | 7.54 | 4.19 | 9.8 | 90.2 | 0.0 | -4.06 | 0.47 | 0.83 | 1.38 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20902 | 2772 | 14 | 0 | 0 | 0 | 0 | logfile |
✘ | 7L85 | 23222 | 2023-10-10 | 2020-12-31 | 2.9 | 3.14 | 2.89 | 3.1 | 0.025 | 1.68 | 0.0 | 0.10 | 9.89 | 0.01 | 2.365 | 2.39 | 0.00 | 2.3 | 97.7 | 0.0 | 0.88 | 0.81 | 0.89 | 4.84 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20556 | 2664 | 24 | 0 | 0 | 0 | 0 | logfile |
✘ | 8SL0 | 40570 | 2023-10-02 | 2023-04-20 | 3.3 | 4.17 | 3.09 | 3.8 | 0.003 | 0.62 | 0.0 | 0.05 | 16.00 | 0.00 | 2.201 | 7.96 | 0.00 | 8.4 | 91.2 | 0.4 | -1.67 | 0.42 | 0.83 | 1.40 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 1737 | 228 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 7RBV | 24403 | 2023-10-15 | 2021-07-06 | 3.6 | 3.85 | — | 3.8 | 0.005 | 0.79 | 0.0 | 0.05 | 13.64 | 0.00 | 2.167 | 6.90 | 0.19 | 8.0 | 91.8 | 0.2 | -1.94 | 0.72 | 0.74 | 2.20 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 30431 | 3718 | 40 | 0 | 111 | 0 | 0 | logfile |
✘ | 7ZNL | 14808 | 2023-10-14 | 2022-04-21 | 3.45 | 3.67 | 3.55 | 3.4 | 0.005 | 0.78 | 0.0 | 0.04 | 11.78 | 0.01 | 2.171 | 7.60 | 6.04 | 6.6 | 93.1 | 0.3 | -2.22 | 0.37 | 0.21 | 0.51 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 84821 | 11173 | 28 | 0 | 0 | 0 | 0 | logfile |
✘ | 8D7R | 27231 | 2023-10-04 | 2022-06-07 | 3.9 | 4.13 | 3.91 | 4.0 | 0.003 | 0.54 | 0.0 | 0.04 | 11.99 | 0.00 | 2.345 | 5.62 | 0.00 | 8.1 | 91.9 | 0.0 | -3.25 | 0.60 | 0.56 | 0.88 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9627 | 1167 | 12 | 0 | 16 | 0 | 0 | logfile |
✘ | 7R48 | 14287 | 2023-10-10 | 2022-02-08 | 2.3 | 2.31 | — | 2.3 | 0.008 | 0.85 | 0.0 | 0.85 | 17.13 | 0.01 | 1.924 | 2.56 | 1.24 | 2.1 | 97.9 | 0.0 | 0.80 | 0.74 | 0.91 | 6.11 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 69247 | 8118 | 115 | 0 | 55 | 2124 | 0 | logfile |
✘ | 7ZGK | 14708 | 2023-10-06 | 2022-04-03 | 3.59 | 4.63 | 3.57 | 3.7 | 0.002 | 0.45 | 0.0 | 0.04 | 13.81 | 0.00 | 0.454 | 5.10 | 0.46 | 2.2 | 97.6 | 0.2 | 1.65 | 0.73 | 0.55 | 1.45 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13639 | 1723 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 7Z30 | 14469 | 2023-10-19 | 2022-03-01 | 2.9 | 2.45 | 2.92 | 2.6 | 0.004 | 0.73 | 0.0 | 0.05 | 18.29 | 0.01 | 1.908 | 14.27 | 2.80 | 5.5 | 94.4 | 0.1 | -1.03 | 0.57 | 0.76 | 2.48 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 40685 | 5103 | 25 | 0 | 35 | 1 | 0 | logfile |
✘ | 8D85 | 27247 | 2023-10-03 | 2022-06-07 | 3.81 | 4.26 | 4.04 | 4.2 | 0.003 | 0.53 | 0.0 | 0.04 | 11.75 | 0.00 | 2.357 | 4.77 | 0.00 | 4.1 | 95.8 | 0.1 | -2.45 | 0.68 | 0.64 | 0.81 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7093 | 865 | 10 | 0 | 11 | 0 | 0 | logfile |