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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7UVV | 26817 | 2023-12-14 | 2022-05-02 | 2.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 0.74 | — | — | 3.70 | 2.6 | 0.006 | 0.69 | 0.0 | 0.04 | 21.89 | 0.01 | 2.050 | 4.72 | 3.60 | 3.1 | 96.8 | 0.1 | 0.71 | — | 0.92 | 0.93 | 3.57 | 138294 | 5500 | 56 | 4447 | 3 | 0 | 0 | logfile |
✘ | 7V88 | 31793 | 2023-12-16 | 2021-08-22 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | -0.29 | — | — | 1.72 | 3.6 | 0.006 | 0.67 | 0.0 | 0.04 | 14.88 | 0.00 | 2.082 | 11.01 | 0.16 | 6.7 | 93.3 | 0.0 | -0.23 | — | 0.86 | 0.86 | 1.51 | 35098 | 4281 | 47 | 0 | 89 | 0 | 0 | logfile |
✘ | 6o7K | 0643 | 2023-12-08 | 2019-03-08 | 4.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | -2.76 | — | — | — | 4.1 | 0.004 | 0.66 | 0.0 | 0.04 | 21.59 | 0.00 | 2.070 | 19.23 | 0.00 | 8.0 | 91.6 | 0.5 | -1.26 | — | 0.90 | 0.84 | — | 57748 | 2934 | 25 | 1622 | 0 | 0 | 0 | logfile |
✘ | 6K9L | 9950 | 2023-12-15 | 2019-06-16 | 4.27 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | -3.11 | — | — | — | 4.2 | 0.002 | 0.68 | 0.0 | 0.04 | 9.69 | 0.00 | 2.113 | 12.22 | 0.00 | 7.1 | 92.9 | 0.0 | 0.72 | — | 0.85 | 0.75 | — | 30601 | 5103 | 2 | 0 | 0 | 0 | 0 | logfile |
✘ | 7MDi | 23773 | 2023-12-15 | 2021-04-05 | 4.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | -4.24 | — | — | — | 4.3 | 0.004 | 0.64 | 0.0 | 0.04 | 13.92 | 0.00 | 1.853 | 10.97 | 0.00 | 12.7 | 87.3 | 0.0 | -1.91 | — | 0.79 | 0.82 | — | 30608 | 4348 | 20 | 0 | 24 | 24 | 0 | logfile |
✘ | 6ZDG | 11173 | 2023-12-14 | 2020-06-14 | 4.7 | 4.97 | — | 4.8 | 0.004 | 0.50 | 0.0 | 0.04 | 9.08 | 0.00 | 1.891 | 7.24 | 2.41 | 3.9 | 96.1 | 0.0 | 0.05 | 0.71 | 0.68 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 28548 | 1884 | 12 | 0 | 3 | 0 | 13995 | logfile |
✘ | 6RX4 | 10049 | 2023-12-08 | 2019-06-07 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7347 | 884 | 8 | 0 | 31 | 7 | 0 | logfile |
✘ | 7ZL1 | 14774 | 2023-12-14 | 2022-04-13 | 2.5 | 2.06 | 2.45 | 2.4 | 0.007 | 0.88 | 0.0 | 0.06 | 14.81 | 0.01 | 2.033 | 2.59 | 0.65 | 5.7 | 93.3 | 1.0 | -0.02 | 0.73 | 0.86 | 6.02 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 27257 | 1720 | 24 | 0 | 8 | 379 | 13574 | logfile |
✘ | 8HTU | 35018 | 2023-12-08 | 2022-12-21 | 2.87 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 57715 | 5089 | 51 | 0 | 366 | 2 | 0 | logfile |
✘ | 6VoF | 21262 | 2023-12-16 | 2020-01-30 | 4.51 | 4.36 | — | 3.7 | 0.007 | 1.03 | 0.0 | 0.05 | 15.51 | 0.01 | 2.176 | 15.23 | 0.76 | 8.3 | 91.6 | 0.1 | -3.59 | 0.84 | 0.77 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35182 | 5175 | 31 | 0 | 5 | 0 | 0 | logfile |
✘ | 7CoY | 30420 | 2023-12-08 | 2020-08-05 | 2.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 57966 | 6096 | 66 | 0 | 279 | 84 | 0 | logfile |
✘ | 7o85 | 12761 | 2023-12-14 | 2021-04-14 | 3.3 | 3.50 | — | 3.5 | 0.002 | 0.48 | 0.0 | 0.04 | 13.51 | 0.00 | 1.470 | 7.44 | 0.00 | 3.3 | 96.7 | 0.0 | -0.25 | 0.71 | 0.75 | 2.90 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 28525 | 3843 | 28 | 0 | 14 | 0 | 0 | logfile |
✘ | 6UUW | 20902 | 2023-12-15 | 2019-11-01 | 2.85 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 32438 | 4136 | 12 | 0 | 14 | 27 | 0 | logfile |
✘ | 8DDR | 27339 | 2023-12-15 | 2022-06-18 | 3.2 | 2.96 | 3.18 | 3.2 | 0.015 | 0.94 | 0.0 | 0.07 | 11.80 | 0.00 | 2.251 | 5.05 | 1.77 | 3.3 | 96.7 | 0.0 | 1.33 | 0.82 | 0.82 | 2.55 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 32074 | 3872 | 12 | 0 | 78 | 0 | 0 | logfile |
✘ | 6K15 | 9905 | 2023-12-12 | 2019-05-09 | 3.4 | 3.68 | — | 3.6 | 0.005 | 0.96 | 0.0 | 0.05 | 10.23 | 0.01 | 1.639 | 5.00 | 0.33 | 8.6 | 91.3 | 0.1 | -4.21 | 0.74 | 0.78 | 2.17 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21486 | 2655 | 14 | 0 | 1 | 0 | 0 | logfile |
✘ | 7SA3 | 24943 | 2023-12-10 | 2021-09-22 | 2.25 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15960 | 1644 | 19 | 0 | 79 | 230 | 0 | logfile |
✘ | 7Z7T | 14537 | 2023-12-17 | 2022-03-16 | 3.1 | 2.49 | — | 3.0 | 0.005 | 0.76 | 0.0 | 1.47 | 17.06 | 0.01 | 2.217 | 5.89 | 0.23 | 2.2 | 97.8 | 0.1 | -0.38 | 0.79 | 0.87 | 2.91 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37395 | 4721 | 23 | 0 | 23 | 0 | 0 | logfile |
✘ | 7RL5 | 24516 | 2023-12-12 | 2021-07-23 | 3.8 | 3.61 | — | 3.8 | 0.013 | 2.04 | 24.0 | 0.11 | 16.71 | 0.02 | 0.524 | 3.05 | 2.05 | 3.3 | 96.3 | 0.4 | -1.86 | 0.40 | 0.52 | 2.12 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 106032 | 6708 | 24 | 0 | 24 | 0 | 52716 | logfile |
✘ | 7ZNJ | 14803 | 2023-12-16 | 2022-04-21 | 2.4 | 2.51 | 2.47 | 2.5 | 0.004 | 0.82 | 0.0 | 0.05 | 17.52 | 0.01 | 2.092 | 3.02 | 0.83 | 1.1 | 98.9 | 0.0 | -1.45 | 0.70 | 0.77 | 3.99 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35088 | 4242 | 36 | 36 | 12 | 0 | 0 | logfile |
✘ | 8J7V | 36050 | 2023-12-09 | 2023-04-28 | 2.79 | 2.88 | 2.79 | 2.8 | 0.004 | 0.73 | 0.0 | 0.05 | 16.71 | 0.01 | 2.208 | 7.08 | 1.54 | 3.3 | 96.7 | 0.0 | 0.39 | 0.62 | 0.79 | 2.92 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11083 | 1432 | 6 | 0 | 0 | 0 | 0 | logfile |