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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7X28 | 32961 | 2023-12-17 | 2022-02-25 | 2.49 | 2.72 | — | 1.8 | 0.013 | 1.52 | 5.0 | 0.11 | 13.24 | 0.00 | 1.606 | 7.72 | 7.98 | 2.7 | 97.0 | 0.2 | 2.21 | 0.57 | 0.40 | 0.90 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 31583 | 4119 | 7 | 0 | 0 | 0 | 0 | logfile |
✘ | 7K1K | 22625 | 2023-12-17 | 2020-09-07 | 4.1 | 4.21 | — | 4.1 | 0.008 | 1.12 | 0.0 | 0.06 | 17.54 | 0.01 | 2.224 | 7.18 | 0.91 | 14.0 | 85.5 | 0.4 | -5.07 | 0.73 | 0.74 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 38243 | 4620 | 7 | 74 | 0 | 0 | 0 | logfile |
✘ | 7P7J | 13237 | 2023-12-17 | 2021-07-19 | 2.7 | 2.61 | — | 2.3 | 0.005 | 0.77 | 0.0 | 1.47 | 15.31 | 0.01 | 2.212 | 4.92 | 1.25 | 2.4 | 97.5 | 0.0 | -0.28 | 0.91 | 0.90 | 3.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37448 | 4719 | 24 | 0 | 28 | 0 | 0 | logfile |
✘ | 6FSZ | 4301 | 2023-12-17 | 2018-02-20 | 4.6 | 4.95 | — | 4.7 | 0.010 | 1.25 | 0.0 | 0.06 | 10.87 | 0.01 | 2.147 | 13.08 | 0.26 | 7.3 | 92.7 | 0.0 | -3.42 | 0.88 | 0.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 36972 | 4821 | 15 | 23 | 11 | 0 | 0 | logfile |
✘ | 8H38 | 34455 | 2023-12-17 | 2022-10-08 | 4.25 | 4.19 | 4.35 | 4.3 | 0.004 | 0.70 | 2.0 | 0.05 | 13.05 | 0.00 | 1.986 | 10.28 | 2.22 | 6.5 | 92.8 | 0.7 | -0.18 | 0.62 | 0.48 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37306 | 4639 | 15 | 0 | 4 | 0 | 0 | logfile |
✘ | 7SCB | 25032 | 2023-12-17 | 2021-09-27 | 2.5 | 3.49 | 2.56 | 3.0 | 0.007 | 1.51 | 3.0 | 0.08 | 17.11 | 0.02 | 2.465 | 3.44 | 2.69 | 3.6 | 96.2 | 0.2 | -4.74 | 0.88 | 0.84 | 1.92 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37229 | 4743 | 54 | 0 | 25 | 0 | 0 | logfile |
✘ | 7UEB | 26471 | 2023-12-17 | 2022-03-21 | 3.08 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37570 | 4006 | 25 | 0 | 106 | 0 | 0 | logfile |
✘ | 7P2Y | 13174 | 2023-12-17 | 2021-07-06 | 3.1 | 3.84 | — | 3.5 | 0.004 | 0.70 | 0.0 | 0.04 | 12.08 | 0.00 | 2.088 | 10.47 | 0.08 | 3.8 | 96.2 | 0.0 | 0.12 | 0.82 | 0.87 | 2.60 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37172 | 4904 | 30 | 0 | 9 | 3 | 0 | logfile |
✘ | 6R10 | 4703 | 2023-12-17 | 2019-03-13 | 4.3 | 4.31 | — | 4.2 | 0.007 | 0.96 | 0.0 | 0.06 | 9.71 | 0.01 | 2.155 | 5.28 | 0.11 | 7.6 | 92.4 | 0.0 | -3.74 | 0.84 | 0.75 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 38522 | 5842 | 28 | 0 | 3 | 0 | 0 | logfile |
✘ | 7Z18 | 14444 | 2023-12-17 | 2022-02-24 | 1.98 | 2.40 | 2.04 | 2.3 | 0.008 | 0.94 | 0.0 | 0.06 | 15.45 | 0.01 | 1.726 | 3.36 | 1.19 | 1.9 | 98.1 | 0.0 | 1.45 | 0.79 | 0.82 | 5.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37659 | 2432 | 18 | 0 | 10 | 2 | 18660 | logfile |
✘ | 7Koo | 22979 | 2023-12-17 | 2020-11-09 | 3.0 | 2.99 | 3.14 | 3.1 | 0.010 | 1.14 | 0.0 | 0.09 | 13.84 | 0.01 | 1.918 | 8.59 | 1.20 | 3.7 | 96.3 | 0.0 | -0.67 | 0.70 | 0.77 | 3.38 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37095 | 2315 | 25 | 0 | 40 | 0 | 18180 | logfile |
✘ | 7Z7T | 14537 | 2023-12-17 | 2022-03-16 | 3.1 | 2.49 | — | 3.0 | 0.005 | 0.76 | 0.0 | 1.47 | 17.06 | 0.01 | 2.217 | 5.89 | 0.23 | 2.2 | 97.8 | 0.1 | -0.38 | 0.79 | 0.87 | 2.91 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37395 | 4721 | 23 | 0 | 23 | 0 | 0 | logfile |
✘ | 7FD5 | 31535 | 2023-12-17 | 2021-07-16 | 2.4 | 3.12 | — | 2.9 | 0.015 | 1.23 | 4.0 | 0.07 | 11.59 | 0.01 | 2.203 | 5.63 | 0.51 | 6.3 | 93.5 | 0.2 | -3.77 | 0.71 | 0.72 | 3.86 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37179 | 4674 | 13 | 0 | 34 | 0 | 0 | logfile |
✘ | 7FD4 | 31534 | 2023-12-17 | 2021-07-16 | 2.4 | 3.11 | — | 2.9 | 0.011 | 1.19 | 5.0 | 0.07 | 11.32 | 0.01 | 2.212 | 5.69 | 0.41 | 6.5 | 93.2 | 0.3 | -3.71 | 0.69 | 0.66 | 3.45 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37182 | 4674 | 13 | 0 | 34 | 0 | 0 | logfile |
✘ | 7Z17 | 14443 | 2023-12-17 | 2022-02-24 | 2.57 | 2.96 | 2.68 | 2.9 | 0.005 | 0.53 | 0.0 | 0.04 | 10.98 | 0.00 | 1.726 | 6.80 | 0.84 | 2.9 | 97.1 | 0.0 | 1.01 | 0.72 | 0.77 | 3.79 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37592 | 2432 | 14 | 0 | 5 | 0 | 18669 | logfile |
✘ | 7oF2 | 12867 | 2023-12-17 | 2021-05-04 | 2.7 | 3.20 | 2.66 | 2.9 | 0.003 | 0.54 | 0.0 | 0.04 | 18.33 | 0.01 | 1.840 | 4.36 | 0.01 | 3.1 | 96.9 | 0.0 | 1.20 | 0.89 | 0.89 | 3.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 101195 | 8560 | 64 | 1466 | 91 | 0 | 0 | logfile |
✘ | 7oF3 | 12868 | 2023-12-17 | 2021-05-04 | 2.7 | 3.23 | 2.69 | 3.0 | 0.003 | 0.50 | 0.0 | 0.04 | 18.28 | 0.00 | 1.761 | 5.69 | 0.00 | 3.2 | 96.8 | 0.0 | 1.34 | 0.88 | 0.88 | 3.46 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 101226 | 8627 | 61 | 1442 | 63 | 0 | 0 | logfile |
✘ | 6L7o | 0849 | 2023-12-16 | 2019-11-02 | 3.2 | 3.37 | — | 3.5 | 0.008 | 1.35 | 0.0 | 2.04 | 50.05 | 0.01 | 1.354 | 12.19 | 0.00 | 5.3 | 94.7 | 0.0 | -2.60 | 0.57 | 0.70 | 0.86 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35037 | 4120 | 34 | 0 | 83 | 0 | 0 | logfile |
✘ | 7RH5 | 24455 | 2023-12-16 | 2021-07-16 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 93342 | 6072 | 44 | 0 | 66 | 0 | 44380 | logfile |
✘ | 7oiC | 12925 | 2023-12-16 | 2021-05-11 | 3.1 | 3.04 | — | 3.0 | 0.014 | 1.27 | 1.0 | 0.11 | 19.89 | 0.01 | 1.916 | 8.15 | 0.13 | 7.7 | 92.2 | 0.1 | -1.98 | 0.75 | 0.78 | 2.96 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 100859 | 8614 | 67 | 1441 | 81 | 0 | 0 | logfile |